RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 CDC14BO60729 498 aa13.27□□□□□ -0.29
HMGA1-206ENST00000478214 GLCEO94923 617 aa13.27□□□□□ -0.29
HMGA1-206ENST00000478214 IGHV1-46P01743 117 aa13.27□□□□□ -0.29
HMGA1-206ENST00000478214 PRR23D2P0DMB1 279 aaPredicted RBP13.27□□□□□ -0.29
HMGA1-206ENST00000478214 KITLGP21583 273 aa13.27□□□□□ -0.29
HMGA1-206ENST00000478214 BLVRAP53004 296 aa13.27□□□□□ -0.29
HMGA1-206ENST00000478214 ACTR3P61158 418 aa13.27□□□□□ -0.29
HMGA1-206ENST00000478214 HLXQ14774 488 aaPredicted RBP13.27□□□□□ -0.29
HMGA1-206ENST00000478214 TEX30Q5JUR7 227 aa13.27□□□□□ -0.29
HMGA1-206ENST00000478214 COLCA1Q6ZS62 124 aa13.27□□□□□ -0.29
HMGA1-206ENST00000478214 NAA40Q86UY6 237 aa13.27□□□□□ -0.29
HMGA1-206ENST00000478214 ZDHHC13Q8IUH4 622 aa13.27□□□□□ -0.29
HMGA1-206ENST00000478214 CPOQ8IVL8 374 aa13.27□□□□□ -0.29
HMGA1-206ENST00000478214 PARP8Q8N3A8 854 aa13.27□□□□□ -0.29
HMGA1-206ENST00000478214 HAVCR1Q96D42 359 aa13.27□□□□□ -0.29
HMGA1-206ENST00000478214 C1QTNF5Q9BXJ0 243 aa13.27□□□□□ -0.29
HMGA1-206ENST00000478214 SEMA6AQ9H2E6 1030 aa13.27□□□□□ -0.29
HMGA1-206ENST00000478214 CHODLQ9H9P2 273 aa13.27□□□□□ -0.29
HMGA1-206ENST00000478214 CYSLTR2Q9NS75 346 aa13.27□□□□□ -0.29
HMGA1-206ENST00000478214 KRT84Q9NSB2 600 aa13.27□□□□□ -0.29
HMGA1-206ENST00000478214 DDX28Q9NUL7 540 aaKnown RBP13.27□□□□□ -0.29
HMGA1-206ENST00000478214 LRP5LA4QPB2 252 aa13.26□□□□□ -0.29
HMGA1-206ENST00000478214 INAFM1C9JVW0 142 aa13.26□□□□□ -0.29
HMGA1-206ENST00000478214 TPD52L2O43399 206 aaKnown RBP13.26□□□□□ -0.29
HMGA1-206ENST00000478214 LILRA1O75019 489 aa13.26□□□□□ -0.29
HMGA1-206ENST00000478214 RP2O75695 350 aa13.26□□□□□ -0.29
HMGA1-206ENST00000478214 IGHV4-31P0DP07 118 aa13.26□□□□□ -0.29
HMGA1-206ENST00000478214 RAC2P15153 192 aa13.26□□□□□ -0.29
HMGA1-206ENST00000478214 HOXB4P17483 251 aaPredicted RBP13.26□□□□□ -0.29
HMGA1-206ENST00000478214 ACHEP22303 614 aa13.26□□□□□ -0.29
HMGA1-206ENST00000478214 GSTT1P30711 240 aa13.26□□□□□ -0.29
HMGA1-206ENST00000478214 TPTEP56180 551 aa13.26□□□□□ -0.29
HMGA1-206ENST00000478214 MRPS11P82912 194 aaKnown RBP13.26□□□□□ -0.29
HMGA1-206ENST00000478214 PTGES3Q15185 160 aaKnown RBP13.26□□□□□ -0.29
HMGA1-206ENST00000478214 TRIP10Q15642 601 aa13.26□□□□□ -0.29
HMGA1-206ENST00000478214 SNAPC1Q16533 368 aa13.26□□□□□ -0.29
HMGA1-206ENST00000478214 KLHL12Q53G59 568 aa13.26□□□□□ -0.29
HMGA1-206ENST00000478214 FAM209AQ5JX71 171 aa13.26□□□□□ -0.29
HMGA1-206ENST00000478214 KDM4DQ6B0I6 523 aa13.26□□□□□ -0.29
HMGA1-206ENST00000478214 FBXW12Q6X9E4 464 aa13.26□□□□□ -0.29
HMGA1-206ENST00000478214 ERI1Q8IV48 349 aaKnown RBP13.26□□□□□ -0.29
HMGA1-206ENST00000478214 BBS1Q8NFJ9 593 aa13.26□□□□□ -0.29
HMGA1-206ENST00000478214 OR5L1Q8NGL2 311 aa13.26□□□□□ -0.29
HMGA1-206ENST00000478214 OR6N2Q8NGY6 317 aa13.26□□□□□ -0.29
HMGA1-206ENST00000478214 ST7LQ8TDW4 575 aa13.26□□□□□ -0.29
HMGA1-206ENST00000478214 SLAMF6Q96DU3 332 aa13.26□□□□□ -0.29
HMGA1-206ENST00000478214 ZMYND19Q96E35 227 aaPredicted RBP13.26□□□□□ -0.29
HMGA1-206ENST00000478214 PLEKHA8Q96JA3 519 aa13.26□□□□□ -0.29
HMGA1-206ENST00000478214 INTS14Q96SY0 518 aa13.26□□□□□ -0.29
HMGA1-206ENST00000478214 GABARAPL1Q9H0R8 117 aa13.26□□□□□ -0.29
HMGA1-206ENST00000478214 ZNF275Q9NSD4 429 aaPredicted RBP13.26□□□□□ -0.29
HMGA1-206ENST00000478214 CENPMQ9NSP4 180 aa13.26□□□□□ -0.29
HMGA1-206ENST00000478214 DECR2Q9NUI1 292 aa13.26□□□□□ -0.29
HMGA1-206ENST00000478214 TVP23BQ9NYZ1 205 aa13.26□□□□□ -0.29
HMGA1-206ENST00000478214 CGGBP1Q9UFW8 167 aaPredicted RBP13.26□□□□□ -0.29
HMGA1-206ENST00000478214 M0R135 149 aa13.25□□□□□ -0.29
HMGA1-206ENST00000478214 LCATP04180 440 aa13.25□□□□□ -0.29
HMGA1-206ENST00000478214 ADH4P08319 380 aa13.25□□□□□ -0.29
HMGA1-206ENST00000478214 EPHA2P29317 976 aa13.25□□□□□ -0.29
HMGA1-206ENST00000478214 OTX1P32242 354 aaPredicted RBP13.25□□□□□ -0.29
HMGA1-206ENST00000478214 LIPAP38571 399 aa13.25□□□□□ -0.29
HMGA1-206ENST00000478214 CRYBB2P43320 205 aa13.25□□□□□ -0.29
HMGA1-206ENST00000478214 ESRRGP62508 458 aa13.25□□□□□ -0.29
HMGA1-206ENST00000478214 SPRNQ5BIV9 151 aa13.25□□□□□ -0.29
HMGA1-206ENST00000478214 OR2T2Q6IF00 324 aa13.25□□□□□ -0.29
HMGA1-206ENST00000478214 Q6ZR03 302 aa13.25□□□□□ -0.29
HMGA1-206ENST00000478214 USP51Q70EK9 711 aa13.25□□□□□ -0.29
HMGA1-206ENST00000478214 SPATC1Q76KD6 591 aa13.25□□□□□ -0.29
HMGA1-206ENST00000478214 CXXC5Q7LFL8 322 aaKnown RBP13.25□□□□□ -0.29
HMGA1-206ENST00000478214 DPY19L4Q7Z388 723 aa13.25□□□□□ -0.29
HMGA1-206ENST00000478214 TIGD4Q8IY51 512 aa13.25□□□□□ -0.29
HMGA1-206ENST00000478214 OR5AS1Q8N127 324 aa13.25□□□□□ -0.29
HMGA1-206ENST00000478214 SPTSSAQ969W0 71 aa13.25□□□□□ -0.29
HMGA1-206ENST00000478214 ZNF799Q96GE5 643 aa13.25□□□□□ -0.29
HMGA1-206ENST00000478214 CENPNQ96H22 339 aaPredicted RBP13.25□□□□□ -0.29
HMGA1-206ENST00000478214 COPS4Q9BT78 406 aa13.25□□□□□ -0.29
HMGA1-206ENST00000478214 TEX12Q9BXU0 123 aa13.25□□□□□ -0.29
HMGA1-206ENST00000478214 MARCH7Q9H992 704 aa13.25□□□□□ -0.29
HMGA1-206ENST00000478214 SAP30LQ9HAJ7 183 aa13.25□□□□□ -0.29
HMGA1-206ENST00000478214 YAE1D1Q9NRH1 226 aa13.25□□□□□ -0.29
HMGA1-206ENST00000478214 OAZ3Q9UMX2 235 aa13.25□□□□□ -0.29
HMGA1-206ENST00000478214 CACNG2Q9Y698 323 aa13.25□□□□□ -0.29
HMGA1-206ENST00000478214 CHD3Q12873 2000 aaKnown RBP13.25□□□□□ -0.29
HMGA1-206ENST00000478214 IGHV1-69-2A0A0G2JMI3 117 aa13.24□□□□□ -0.29
HMGA1-206ENST00000478214 SAC3D1A6NKF1 404 aa13.24□□□□□ -0.29
HMGA1-206ENST00000478214 H3BNX3 289 aa13.24□□□□□ -0.29
HMGA1-206ENST00000478214 PRODHO43272 600 aa13.24□□□□□ -0.29
HMGA1-206ENST00000478214 PPIHO43447 177 aaKnown RBP13.24□□□□□ -0.29
HMGA1-206ENST00000478214 TACSTD2P09758 323 aa13.24□□□□□ -0.29
HMGA1-206ENST00000478214 ANOS1P23352 680 aa13.24□□□□□ -0.29
HMGA1-206ENST00000478214 GPR6P46095 362 aaPredicted RBP13.24□□□□□ -0.29
HMGA1-206ENST00000478214 SLC6A9P48067 706 aa13.24□□□□□ -0.29
HMGA1-206ENST00000478214 PRKXP51817 358 aa13.24□□□□□ -0.29
HMGA1-206ENST00000478214 PRSS12P56730 875 aa13.24□□□□□ -0.29
HMGA1-206ENST00000478214 TMEM33P57088 247 aa13.24□□□□□ -0.29
HMGA1-206ENST00000478214 CDK5R2Q13319 367 aa13.24□□□□□ -0.29
HMGA1-206ENST00000478214 EIF2B1Q14232 305 aaKnown RBP13.24□□□□□ -0.29
HMGA1-206ENST00000478214 TAF13Q15543 124 aa13.24□□□□□ -0.29
HMGA1-206ENST00000478214 ZMAT1Q5H9K5 638 aa13.24□□□□□ -0.29
HMGA1-206ENST00000478214 AMELYQ99218 206 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms