RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 RBBP9O75884 186 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 SLC22A5O76082 557 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 NDUFB6O95139 128 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 IFNA7P01567 189 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 HLA-DQA2P01906 255 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 MAS1P04201 325 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 CD2P06729 351 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 SPARCP09486 303 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 CSF1P09603 554 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 GIPP09681 153 aaPredicted RBP4.41□□□□□ -1.7
SF3B6-202ENST00000478050 CEACAM1P13688 526 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 CXCL3P19876 107 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 CSRP1P21291 193 aaKnown RBP4.41□□□□□ -1.7
SF3B6-202ENST00000478050 ACHEP22303 614 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 ABCD3P28288 659 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 PI4KAP42356 2102 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 MAGEB1P43366 347 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 OR3A3P47888 321 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 VEGFCP49767 419 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 DAP3P51398 398 aaKnown RBP4.41□□□□□ -1.7
SF3B6-202ENST00000478050 CAPZA1P52907 286 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 DLX5P56178 289 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 CLDN12P56749 244 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 OR1D5P58170 312 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 SLC26A5P58743 744 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 RAP2BP61225 183 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 DHODHQ02127 395 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 CFHR1Q03591 330 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 CAMK2DQ13557 499 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 TOMM34Q15785 309 aaPredicted RBP4.41□□□□□ -1.7
SF3B6-202ENST00000478050 RAB11BQ15907 218 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 ACKR1Q16570 336 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 MEP1BQ16820 701 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 KRTAP21-3Q3LHN1 58 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 LINC00303Q3SY05 128 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 VWA2Q5GFL6 755 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 WDR38Q5JTN6 314 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 TEX30Q5JUR7 227 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 GLT8D1Q68CQ7 371 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 ANKRD16Q6P6B7 361 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 FAM198BQ6UWH4 519 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 GLDNQ6ZMI3 551 aaPredicted RBP4.41□□□□□ -1.7
SF3B6-202ENST00000478050 RABEPKQ7Z6M1 372 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 KRT77Q7Z794 578 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 CATSPERDQ86XM0 798 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 ADGRG3Q86Y34 549 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 SERPINA12Q8IW75 414 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 Q8N1Y9 231 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 DEFB119Q8N690 84 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 ZNF248Q8NDW4 579 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 DNAAF1Q8NEP3 725 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 BEST4Q8NFU0 473 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 OR11G2Q8NGC1 345 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 GPR119Q8TDV5 335 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 ST8SIA1Q92185 356 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 TMEM106AQ96A25 262 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 ZBTB8AQ96BR9 441 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 ZNF524Q96C55 264 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 C8orf44Q96CB5 159 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 SLC25A36Q96CQ1 311 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 ZNF501Q96CX3 271 aaPredicted RBP4.41□□□□□ -1.7
SF3B6-202ENST00000478050 DPYSL5Q9BPU6 564 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 KLHDC3Q9BQ90 382 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 VN1R1Q9GZP7 353 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 OR10A4Q9H209 315 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 ELOVL3Q9HB03 270 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 NOX3Q9HBY0 568 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 NKIRAS2Q9NYR9 191 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 MRPL15Q9P015 296 aaKnown RBP4.41□□□□□ -1.7
SF3B6-202ENST00000478050 DHCR7Q9UBM7 475 aaKnown RBP4.41□□□□□ -1.7
SF3B6-202ENST00000478050 MGAT4CQ9UBM8 478 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 CKLFQ9UBR5 152 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 MTFP1Q9UDX5 166 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 SLC23A1Q9UHI7 598 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 DHDHQ9UQ10 334 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 B3GALT1Q9Y5Z6 326 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 X6R8D5 127 aa4.41□□□□□ -1.7
SF3B6-202ENST00000478050 UBR5O95071 2799 aaPredicted RBP4.41□□□□□ -1.7
SF3B6-202ENST00000478050 NAV3Q8IVL0 2385 aa4.4□□□□□ -1.7
SF3B6-202ENST00000478050 DMXL2Q8TDJ6 3036 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 IGLV3-12A0A075B6K2 115 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 A0A0A6YYH2 397 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 A0A1B0GTH9 108 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 A6NJ64 397 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 FTCDNL1E5RQL4 147 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 NPIPA5E9PKD4 350 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 TOX3O15405 576 aaPredicted RBP4.4□□□□□ -1.71
SF3B6-202ENST00000478050 SLC16A7O60669 478 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 TSC22D2O75157 780 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 CTAG2O75638 210 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 AQP8O94778 261 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 PLGP00747 810 aaPredicted RBP4.4□□□□□ -1.71
SF3B6-202ENST00000478050 AKAIN1P0CW23 69 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 CD37P11049 281 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 FOLR1P15328 257 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 CTLA4P16410 223 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 ZNF823P16415 610 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 NAGAP17050 411 aa4.4□□□□□ -1.71
SF3B6-202ENST00000478050 DCTDP32321 178 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms