RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 RBM34P42696 430 aaKnown RBP0.07□□□□□ -2.4
NCKAP1-204ENST00000477988 TGM4P49221 684 aa0.07□□□□□ -2.4
NCKAP1-204ENST00000477988 SLC25A11Q02978 314 aaKnown RBP0.07□□□□□ -2.4
NCKAP1-204ENST00000477988 DGCR6Q14129 220 aa0.07□□□□□ -2.4
NCKAP1-204ENST00000477988 NCF4Q15080 339 aa0.07□□□□□ -2.4
NCKAP1-204ENST00000477988 TTC23Q5W5X9 447 aa0.07□□□□□ -2.4
NCKAP1-204ENST00000477988 ERO1BQ86YB8 467 aa0.07□□□□□ -2.4
NCKAP1-204ENST00000477988 EIF4E3Q8N5X7 224 aaKnown RBP0.07□□□□□ -2.4
NCKAP1-204ENST00000477988 ZNF713Q8N859 430 aaPredicted RBP0.07□□□□□ -2.4
NCKAP1-204ENST00000477988 ZNF606Q8WXB4 792 aa0.07□□□□□ -2.4
NCKAP1-204ENST00000477988 PLEKHA8Q96JA3 519 aa0.07□□□□□ -2.4
NCKAP1-204ENST00000477988 ZNF75AQ96N20 296 aa0.07□□□□□ -2.4
NCKAP1-204ENST00000477988 CNN2Q99439 309 aaKnown RBP0.07□□□□□ -2.4
NCKAP1-204ENST00000477988 TXNDC17Q9BRA2 123 aa0.07□□□□□ -2.4
NCKAP1-204ENST00000477988 SAMD10Q9BYL1 202 aa0.07□□□□□ -2.4
NCKAP1-204ENST00000477988 KRT23Q9C075 422 aa0.07□□□□□ -2.4
NCKAP1-204ENST00000477988 HSD3B7Q9H2F3 369 aa0.07□□□□□ -2.4
NCKAP1-204ENST00000477988 RWDD1Q9H446 243 aaPredicted RBP0.07□□□□□ -2.4
NCKAP1-204ENST00000477988 CWH43Q9H720 699 aa0.07□□□□□ -2.4
NCKAP1-204ENST00000477988 TMEM27Q9HBJ8 222 aa0.07□□□□□ -2.4
NCKAP1-204ENST00000477988 ZNF286AQ9HBT8 521 aa0.07□□□□□ -2.4
NCKAP1-204ENST00000477988 RNF14Q9UBS8 474 aa0.07□□□□□ -2.4
NCKAP1-204ENST00000477988 MTFP1Q9UDX5 166 aa0.07□□□□□ -2.4
NCKAP1-204ENST00000477988 PIN4Q9Y237 131 aaKnown RBP0.07□□□□□ -2.4
NCKAP1-204ENST00000477988 MAPK8IP3Q9UPT6 1336 aa0.07□□□□□ -2.4
NCKAP1-204ENST00000477988 PNPLA6Q8IY17 1366 aa0.06□□□□□ -2.4
NCKAP1-204ENST00000477988 ATG2BQ96BY7 2078 aa0.06□□□□□ -2.4
NCKAP1-204ENST00000477988 FAM170AA1A519 330 aa0.06□□□□□ -2.4
NCKAP1-204ENST00000477988 C9JVG2 144 aa0.06□□□□□ -2.4
NCKAP1-204ENST00000477988 PLPP1O14494 284 aa0.06□□□□□ -2.4
NCKAP1-204ENST00000477988 SOX15O60248 233 aa0.06□□□□□ -2.4
NCKAP1-204ENST00000477988 OTX1P32242 354 aaPredicted RBP0.06□□□□□ -2.4
NCKAP1-204ENST00000477988 CHI3L1P36222 383 aaPredicted RBP0.06□□□□□ -2.4
NCKAP1-204ENST00000477988 MAGEA6P43360 314 aa0.06□□□□□ -2.4
NCKAP1-204ENST00000477988 OR1G1P47890 313 aa0.06□□□□□ -2.4
NCKAP1-204ENST00000477988 LGALS7P47929 136 aa0.06□□□□□ -2.4
NCKAP1-204ENST00000477988 CSNK1EP49674 416 aaKnown RBP0.06□□□□□ -2.4
NCKAP1-204ENST00000477988 ZNF266Q14584 549 aa0.06□□□□□ -2.4
NCKAP1-204ENST00000477988 ANKRD26P1Q6NSI1 321 aa0.06□□□□□ -2.4
NCKAP1-204ENST00000477988 H3F3CQ6NXT2 135 aa0.06□□□□□ -2.4
NCKAP1-204ENST00000477988 DNAAF3Q8N9W5 541 aa0.06□□□□□ -2.4
NCKAP1-204ENST00000477988 RHEBL1Q8TAI7 183 aa0.06□□□□□ -2.4
NCKAP1-204ENST00000477988 GPR119Q8TDV5 335 aa0.06□□□□□ -2.4
NCKAP1-204ENST00000477988 THRSPQ92748 146 aa0.06□□□□□ -2.4
NCKAP1-204ENST00000477988 DCPSQ96C86 337 aaKnown RBP0.06□□□□□ -2.4
NCKAP1-204ENST00000477988 HSPB9Q9BQS6 159 aa0.06□□□□□ -2.4
NCKAP1-204ENST00000477988 TMEM243Q9BU79 118 aa0.06□□□□□ -2.4
NCKAP1-204ENST00000477988 RACGAP1Q9H0H5 632 aa0.06□□□□□ -2.4
NCKAP1-204ENST00000477988 TMEM9BQ9NQ34 198 aa0.06□□□□□ -2.4
NCKAP1-204ENST00000477988 SMOXQ9NWM0 555 aa0.06□□□□□ -2.4
NCKAP1-204ENST00000477988 HMGXB4Q9UGU5 601 aa0.06□□□□□ -2.4
NCKAP1-204ENST00000477988 OR51B4Q9Y5P0 310 aa0.06□□□□□ -2.4
NCKAP1-204ENST00000477988 SYNE2Q8WXH0 6885 aaKnown RBP0.06□□□□□ -2.4
NCKAP1-204ENST00000477988 A0A1B0GUH1 482 aa0.05□□□□□ -2.4
NCKAP1-204ENST00000477988 RGSL1A5PLK6 1076 aa0.05□□□□□ -2.4
NCKAP1-204ENST00000477988 C19orf71A6NCJ1 209 aa0.05□□□□□ -2.4
NCKAP1-204ENST00000477988 KRT87PA6NCN2 255 aa0.05□□□□□ -2.4
NCKAP1-204ENST00000477988 NUPL2O15504 423 aaKnown RBP0.05□□□□□ -2.4
NCKAP1-204ENST00000477988 CTAG2O75638 210 aa0.05□□□□□ -2.4
NCKAP1-204ENST00000477988 DIRAS3O95661 229 aa0.05□□□□□ -2.4
NCKAP1-204ENST00000477988 CDS2O95674 445 aa0.05□□□□□ -2.4
NCKAP1-204ENST00000477988 UGT2B4P06133 528 aa0.05□□□□□ -2.4
NCKAP1-204ENST00000477988 ERGP11308 486 aa0.05□□□□□ -2.4
NCKAP1-204ENST00000477988 ZNF708P17019 499 aa0.05□□□□□ -2.4
NCKAP1-204ENST00000477988 POLR2IP36954 125 aaKnown RBP0.05□□□□□ -2.4
NCKAP1-204ENST00000477988 PPT1P50897 306 aa0.05□□□□□ -2.4
NCKAP1-204ENST00000477988 FOXA1P55317 472 aa0.05□□□□□ -2.4
NCKAP1-204ENST00000477988 YWHAGP61981 247 aaKnown RBP eCLIP0.05□□□□□ -2.4
NCKAP1-204ENST00000477988 RPS23P62266 143 aaKnown RBP0.05□□□□□ -2.4
NCKAP1-204ENST00000477988 SCGB2A2Q13296 93 aa0.05□□□□□ -2.4
NCKAP1-204ENST00000477988 TSC22D1Q15714 1073 aa0.05□□□□□ -2.4
NCKAP1-204ENST00000477988 TPD52L1Q16890 204 aaPredicted RBP0.05□□□□□ -2.4
NCKAP1-204ENST00000477988 ZNF322Q6U7Q0 402 aaPredicted RBP0.05□□□□□ -2.4
NCKAP1-204ENST00000477988 LRRC74BQ6ZQY2 392 aa0.05□□□□□ -2.4
NCKAP1-204ENST00000477988 Q6ZRN7 208 aaPredicted RBP0.05□□□□□ -2.4
NCKAP1-204ENST00000477988 SLC26A10Q8NG04 563 aa0.05□□□□□ -2.4
NCKAP1-204ENST00000477988 STMN2Q93045 179 aa0.05□□□□□ -2.4
NCKAP1-204ENST00000477988 C10orf35Q96D05 121 aa0.05□□□□□ -2.4
NCKAP1-204ENST00000477988 OR5B12Q96R08 314 aa0.05□□□□□ -2.4
NCKAP1-204ENST00000477988 COPS8Q99627 209 aa0.05□□□□□ -2.4
NCKAP1-204ENST00000477988 TRIM62Q9BVG3 475 aa0.05□□□□□ -2.4
NCKAP1-204ENST00000477988 TTTY12Q9BZ98 90 aa0.05□□□□□ -2.4
NCKAP1-204ENST00000477988 DYRK4Q9NR20 520 aa0.05□□□□□ -2.4
NCKAP1-204ENST00000477988 GOLT1BQ9Y3E0 138 aa0.05□□□□□ -2.4
NCKAP1-204ENST00000477988 AMMECR1Q9Y4X0 333 aaPredicted RBP0.05□□□□□ -2.4
NCKAP1-204ENST00000477988 LRRC42Q9Y546 428 aa0.05□□□□□ -2.4
NCKAP1-204ENST00000477988 ATP10AO60312 1499 aa0.04□□□□□ -2.4
NCKAP1-204ENST00000477988 IGHV1-69DA0A0B4J2H0 117 aa0.04□□□□□ -2.4
NCKAP1-204ENST00000477988 A0A0J9YXV3 536 aa0.04□□□□□ -2.4
NCKAP1-204ENST00000477988 GGTLC3B5MD39 225 aa0.04□□□□□ -2.4
NCKAP1-204ENST00000477988 DYNC1I1O14576 645 aa0.04□□□□□ -2.4
NCKAP1-204ENST00000477988 ARPC3O15145 178 aa0.04□□□□□ -2.4
NCKAP1-204ENST00000477988 PALMO75781 387 aa0.04□□□□□ -2.4
NCKAP1-204ENST00000477988 GATBO75879 557 aaKnown RBP0.04□□□□□ -2.4
NCKAP1-204ENST00000477988 S1PR2O95136 353 aa0.04□□□□□ -2.4
NCKAP1-204ENST00000477988 MT-ND3P03897 115 aa0.04□□□□□ -2.4
NCKAP1-204ENST00000477988 SLC35G6P0C7Q6 338 aa0.04□□□□□ -2.4
NCKAP1-204ENST00000477988 HSPD1P10809 573 aaKnown RBP0.04□□□□□ -2.4
NCKAP1-204ENST00000477988 NCF1P14598 390 aaPredicted RBP0.04□□□□□ -2.4
NCKAP1-204ENST00000477988 VHLP40337 213 aa0.04□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms