RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 SKA3Q8IX90 412 aa10.59□□□□□ -0.71
PRPF39-203ENST00000477626 SLC22A24Q8N4F4 322 aa10.59□□□□□ -0.71
PRPF39-203ENST00000477626 PAQR4Q8N4S7 273 aaPredicted RBP10.59□□□□□ -0.71
PRPF39-203ENST00000477626 CPEB3Q8NE35 698 aaKnown RBP10.59□□□□□ -0.71
PRPF39-203ENST00000477626 SETD6Q8TBK2 473 aa10.59□□□□□ -0.71
PRPF39-203ENST00000477626 TMEM106AQ96A25 262 aa10.59□□□□□ -0.71
PRPF39-203ENST00000477626 SLC7A10Q9NS82 523 aa10.59□□□□□ -0.71
PRPF39-203ENST00000477626 A0A1W2PPK0 400 aa10.59□□□□□ -0.71
PRPF39-203ENST00000477626 NPIPA2E9PIF3 369 aa10.59□□□□□ -0.71
PRPF39-203ENST00000477626 NPIPA3F8WFD2 350 aa10.59□□□□□ -0.71
PRPF39-203ENST00000477626 EIF1AXP47813 144 aaKnown RBP10.59□□□□□ -0.71
PRPF39-203ENST00000477626 FAM220AQ7Z4H9 259 aa10.59□□□□□ -0.71
PRPF39-203ENST00000477626 TMEM178AQ8NBL3 297 aa10.59□□□□□ -0.71
PRPF39-203ENST00000477626 OR51A2Q8NGJ7 313 aa10.59□□□□□ -0.71
PRPF39-203ENST00000477626 FNDC9Q8TBE3 224 aa10.59□□□□□ -0.71
PRPF39-203ENST00000477626 SLC25A18Q9H1K4 315 aa10.59□□□□□ -0.71
PRPF39-203ENST00000477626 NIPAL2Q9H841 368 aa10.59□□□□□ -0.71
PRPF39-203ENST00000477626 A0A0B4J293 547 aa10.59□□□□□ -0.71
PRPF39-203ENST00000477626 A6NL46 340 aa10.59□□□□□ -0.71
PRPF39-203ENST00000477626 GRB2P62993 217 aaKnown RBP10.59□□□□□ -0.71
PRPF39-203ENST00000477626 SLC10A1Q14973 349 aa10.59□□□□□ -0.71
PRPF39-203ENST00000477626 RNPS1Q15287 305 aaKnown RBP10.59□□□□□ -0.71
PRPF39-203ENST00000477626 DTNBP1Q96EV8 351 aa10.59□□□□□ -0.71
PRPF39-203ENST00000477626 AK6Q9Y3D8 172 aaKnown RBP10.59□□□□□ -0.71
PRPF39-203ENST00000477626 A0A1W2PPL8 197 aa10.58□□□□□ -0.72
PRPF39-203ENST00000477626 APOA1P02647 267 aa10.58□□□□□ -0.72
PRPF39-203ENST00000477626 MAPK3P27361 379 aaPredicted RBP10.58□□□□□ -0.72
PRPF39-203ENST00000477626 ALDH3B1P43353 468 aa10.58□□□□□ -0.72
PRPF39-203ENST00000477626 PSG4Q00888 419 aa10.58□□□□□ -0.72
PRPF39-203ENST00000477626 UBE2NLQ5JXB2 153 aa10.58□□□□□ -0.72
PRPF39-203ENST00000477626 TRMT10AQ8TBZ6 339 aaKnown RBP10.58□□□□□ -0.72
PRPF39-203ENST00000477626 TBCCD1Q9NVR7 557 aa10.58□□□□□ -0.72
PRPF39-203ENST00000477626 A0A0G2JMP0 313 aa10.58□□□□□ -0.72
PRPF39-203ENST00000477626 A0A0X1KG70 313 aa10.58□□□□□ -0.72
PRPF39-203ENST00000477626 TRAPPC6AO75865 159 aa10.58□□□□□ -0.72
PRPF39-203ENST00000477626 PTTG1O95997 202 aa10.58□□□□□ -0.72
PRPF39-203ENST00000477626 YES1P07947 543 aa10.58□□□□□ -0.72
PRPF39-203ENST00000477626 OCM2P0CE71 109 aa10.58□□□□□ -0.72
PRPF39-203ENST00000477626 SNRPBP14678 240 aaKnown RBP10.58□□□□□ -0.72
PRPF39-203ENST00000477626 RAB35Q15286 201 aa10.58□□□□□ -0.72
PRPF39-203ENST00000477626 SNAI3Q3KNW1 292 aa10.58□□□□□ -0.72
PRPF39-203ENST00000477626 ELFN2Q5R3F8 820 aa10.58□□□□□ -0.72
PRPF39-203ENST00000477626 KRT77Q7Z794 578 aa10.58□□□□□ -0.72
PRPF39-203ENST00000477626 CDH26Q8IXH8 852 aa10.58□□□□□ -0.72
PRPF39-203ENST00000477626 OR4M2Q8NGB6 313 aa10.58□□□□□ -0.72
PRPF39-203ENST00000477626 C1QTNF5Q9BXJ0 243 aa10.58□□□□□ -0.72
PRPF39-203ENST00000477626 OR2H1Q9GZK4 316 aa10.58□□□□□ -0.72
PRPF39-203ENST00000477626 SLCO5A1Q9H2Y9 848 aa10.58□□□□□ -0.72
PRPF39-203ENST00000477626 RERGLQ9H628 205 aa10.58□□□□□ -0.72
PRPF39-203ENST00000477626 TRGV5A0A0B4J1U4 118 aa10.58□□□□□ -0.72
PRPF39-203ENST00000477626 NR2C1P13056 603 aa10.58□□□□□ -0.72
PRPF39-203ENST00000477626 MMP15P51511 669 aa10.58□□□□□ -0.72
PRPF39-203ENST00000477626 CCL11P51671 97 aa10.58□□□□□ -0.72
PRPF39-203ENST00000477626 DEFB109BQ30KR1 87 aa10.58□□□□□ -0.72
PRPF39-203ENST00000477626 SEZ6L2Q6UXD5 910 aa10.58□□□□□ -0.72
PRPF39-203ENST00000477626 DNAAF1Q8NEP3 725 aa10.58□□□□□ -0.72
PRPF39-203ENST00000477626 V9GY05 133 aa10.58□□□□□ -0.72
PRPF39-203ENST00000477626 TMEM269A0A1B0GVZ9 245 aa10.57□□□□□ -0.72
PRPF39-203ENST00000477626 ZNF726A6NNF4 738 aa10.57□□□□□ -0.72
PRPF39-203ENST00000477626 DHRS7CA6NNS2 312 aa10.57□□□□□ -0.72
PRPF39-203ENST00000477626 K7ENP7 123 aa10.57□□□□□ -0.72
PRPF39-203ENST00000477626 TNFSF13O75888 250 aa10.57□□□□□ -0.72
PRPF39-203ENST00000477626 EDN3P14138 238 aa10.57□□□□□ -0.72
PRPF39-203ENST00000477626 ZNF823P16415 610 aa10.57□□□□□ -0.72
PRPF39-203ENST00000477626 COX5AP20674 150 aa10.57□□□□□ -0.72
PRPF39-203ENST00000477626 OR3A2P47893 321 aa10.57□□□□□ -0.72
PRPF39-203ENST00000477626 ARG2P78540 354 aa10.57□□□□□ -0.72
PRPF39-203ENST00000477626 INO80CQ6PI98 192 aaPredicted RBP10.57□□□□□ -0.72
PRPF39-203ENST00000477626 ZNF100Q8IYN0 542 aa10.57□□□□□ -0.72
PRPF39-203ENST00000477626 CMTM4Q8IZR5 234 aa10.57□□□□□ -0.72
PRPF39-203ENST00000477626 LGALS14Q8TCE9 139 aa10.57□□□□□ -0.72
PRPF39-203ENST00000477626 UBASH3BQ8TF42 649 aa10.57□□□□□ -0.72
PRPF39-203ENST00000477626 YIPF5Q969M3 257 aa10.57□□□□□ -0.72
PRPF39-203ENST00000477626 PTX4Q96A99 478 aa10.57□□□□□ -0.72
PRPF39-203ENST00000477626 LIN7BQ9HAP6 207 aa10.57□□□□□ -0.72
PRPF39-203ENST00000477626 SLC17A2O00624 439 aa10.57□□□□□ -0.72
PRPF39-203ENST00000477626 ALDOBP05062 364 aa10.57□□□□□ -0.72
PRPF39-203ENST00000477626 NR4A2P43354 598 aa10.57□□□□□ -0.72
PRPF39-203ENST00000477626 EFNB2P52799 333 aa10.57□□□□□ -0.72
PRPF39-203ENST00000477626 TMEM255AQ5JRV8 349 aa10.57□□□□□ -0.72
PRPF39-203ENST00000477626 ALKBH3Q96Q83 286 aaPredicted RBP10.57□□□□□ -0.72
PRPF39-203ENST00000477626 TAS2R4Q9NYW5 299 aa10.57□□□□□ -0.72
PRPF39-203ENST00000477626 DAPK2Q9UIK4 370 aa10.57□□□□□ -0.72
PRPF39-203ENST00000477626 ADAM30Q9UKF2 790 aa10.57□□□□□ -0.72
PRPF39-203ENST00000477626 IKZF2Q9UKS7 526 aa10.57□□□□□ -0.72
PRPF39-203ENST00000477626 ETV7Q9Y603 341 aa10.57□□□□□ -0.72
PRPF39-203ENST00000477626 DNAJC13O75165 2243 aa10.57□□□□□ -0.72
PRPF39-203ENST00000477626 TOXO94900 526 aa10.57□□□□□ -0.72
PRPF39-203ENST00000477626 HLA-DQA2P01906 255 aa10.57□□□□□ -0.72
PRPF39-203ENST00000477626 TMIGD3P0DMS9 266 aaPredicted RBP10.57□□□□□ -0.72
PRPF39-203ENST00000477626 GABRA1P14867 456 aa10.57□□□□□ -0.72
PRPF39-203ENST00000477626 MYL9P24844 172 aa10.57□□□□□ -0.72
PRPF39-203ENST00000477626 PLA2G5P39877 138 aa10.57□□□□□ -0.72
PRPF39-203ENST00000477626 CX3CR1P49238 355 aa10.57□□□□□ -0.72
PRPF39-203ENST00000477626 ZNF169Q14929 603 aaPredicted RBP10.57□□□□□ -0.72
PRPF39-203ENST00000477626 TFAP2EQ6VUC0 442 aa10.57□□□□□ -0.72
PRPF39-203ENST00000477626 SPACA3Q8IXA5 215 aa10.57□□□□□ -0.72
PRPF39-203ENST00000477626 GJC3Q8NFK1 279 aa10.57□□□□□ -0.72
PRPF39-203ENST00000477626 THRSPQ92748 146 aa10.57□□□□□ -0.72
PRPF39-203ENST00000477626 FOXB1Q99853 325 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms