RNA–Protein interactions for RNA: ENST00000477583.1

CACUL1-202, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-202ENST00000477583 NMRK1Q9NWW6 199 aa1.38□□□□□ -2.19
CACUL1-202ENST00000477583 CCDC59Q9P031 241 aaKnown RBP1.38□□□□□ -2.19
CACUL1-202ENST00000477583 DUX4Q9UBX2 424 aa1.38□□□□□ -2.19
CACUL1-202ENST00000477583 MTFP1Q9UDX5 166 aa1.38□□□□□ -2.19
CACUL1-202ENST00000477583 RRP15Q9Y3B9 282 aaKnown RBP1.38□□□□□ -2.19
CACUL1-202ENST00000477583 WIF1Q9Y5W5 379 aa1.38□□□□□ -2.19
CACUL1-202ENST00000477583 EPRSP07814 1512 aaKnown RBP1.38□□□□□ -2.19
CACUL1-202ENST00000477583 DISP1Q96F81 1524 aa1.38□□□□□ -2.19
CACUL1-202ENST00000477583 KDM5DQ9BY66 1539 aa1.38□□□□□ -2.19
CACUL1-202ENST00000477583 KDM5BQ9UGL1 1544 aa1.38□□□□□ -2.19
CACUL1-202ENST00000477583 PTPRGP23470 1445 aa1.38□□□□□ -2.19
CACUL1-202ENST00000477583 TROQ12816 1431 aaPredicted RBP1.38□□□□□ -2.19
CACUL1-202ENST00000477583 YEATS2Q9ULM3 1422 aa1.38□□□□□ -2.19
CACUL1-202ENST00000477583 KIAA1107Q9UPP5 1409 aa1.38□□□□□ -2.19
CACUL1-202ENST00000477583 EIF4G3O43432 1585 aaKnown RBP1.38□□□□□ -2.19
CACUL1-202ENST00000477583 NUP153P49790 1475 aaKnown RBP1.37□□□□□ -2.19
CACUL1-202ENST00000477583 NCOA2Q15596 1464 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 PLEKHH2Q8IVE3 1493 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 TEX14Q8IWB6 1497 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 SHROOM2Q13796 1616 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 ADCY10Q96PN6 1610 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 MTUS2Q5JR59 1369 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 IGKV1D-17A0A075B6S4 117 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 TRBV9A0A0B4J1U6 114 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 CCDC169A6NNP5 214 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 NCBP2LA6PVI3 153 aaKnown RBP1.37□□□□□ -2.19
CACUL1-202ENST00000477583 H0YJW9 148 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 DNASE2O00115 360 aaPredicted RBP1.37□□□□□ -2.19
CACUL1-202ENST00000477583 AP3B1O00203 1094 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 SCAMP2O15127 329 aaKnown RBP1.37□□□□□ -2.19
CACUL1-202ENST00000477583 SOCS1O15524 211 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 RRP8O43159 456 aaKnown RBP1.37□□□□□ -2.19
CACUL1-202ENST00000477583 REM1O75628 298 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 IGKV1-17P01599 117 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 HLA-DQA1P01909 254 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 ARG1P05089 322 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 DCNP07585 359 aaKnown RBP1.37□□□□□ -2.19
CACUL1-202ENST00000477583 CTSLP07711 333 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 OR8U9P0C7N5 309 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 ZNF806P0C7X5 589 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 CT45A6P0DMU7 189 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 CT45A5P0DMU8 189 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 CT45A7P0DMV0 189 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 C1GALT1C1LP0DN25 315 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 ERGP11308 486 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 ATF6P18850 670 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 CELP19835 753 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 CXCL12P48061 93 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 CACNG7P62955 275 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 PRR3P79522 188 aaKnown RBP1.37□□□□□ -2.19
CACUL1-202ENST00000477583 PITPNAQ00169 270 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 LRRC74AQ0VAA2 488 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 ZNF816Q0VGE8 651 aaPredicted RBP1.37□□□□□ -2.19
CACUL1-202ENST00000477583 TRAM2Q15035 370 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 PRSS8Q16651 343 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 CT45A1Q5HYN5 189 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 AVPI1Q5T686 147 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 CARD17Q5XLA6 110 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 ZFP1Q6P2D0 407 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 NPSR1Q6W5P4 371 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 C12orf54Q6X4T0 127 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 SLC16A13Q7RTY0 426 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 SNX20Q7Z614 316 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 LYPD1Q8N2G4 141 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 COX18Q8N8Q8 333 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 CHST4Q8NCG5 386 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 OR52E2Q8NGJ4 325 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 CT45A3Q8NHU0 189 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 LYPD6BQ8NI32 183 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 LINC01560Q8TB33 94 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 CIRBP-AS1Q8TBR5 109 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 RNF157Q96PX1 679 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 PANX1Q96RD7 426 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 DOK1Q99704 481 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 LZTS2Q9BRK4 669 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 TIMM29Q9BSF4 260 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 TMEM165Q9HC07 324 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 ZNF160Q9HCG1 818 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 RETNQ9HD89 108 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 PTTG3PQ9NZH4 202 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 MTCH1Q9NZJ7 389 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 MARCOQ9UEW3 520 aaPredicted RBP1.37□□□□□ -2.19
CACUL1-202ENST00000477583 RABL2BQ9UNT1 228 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 SLC17A4Q9Y2C5 497 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 HYOU1Q9Y4L1 999 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 FHOD3Q2V2M9 1422 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 SETD5Q9C0A6 1442 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 ABCA8O94911 1581 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 NEURL4Q96JN8 1562 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 SUPT6HQ7KZ85 1726 aaKnown RBP1.37□□□□□ -2.19
CACUL1-202ENST00000477583 MAGI2Q86UL8 1455 aa1.37□□□□□ -2.19
CACUL1-202ENST00000477583 PALLDQ8WX93 1383 aa1.36□□□□□ -2.19
CACUL1-202ENST00000477583 NINLQ9Y2I6 1382 aa1.36□□□□□ -2.19
CACUL1-202ENST00000477583 MAPKBP1O60336 1514 aa1.36□□□□□ -2.19
CACUL1-202ENST00000477583 ABCC2Q92887 1545 aa1.36□□□□□ -2.19
CACUL1-202ENST00000477583 ARHGEF12Q9NZN5 1544 aa1.36□□□□□ -2.19
CACUL1-202ENST00000477583 FAM135AQ9P2D6 1515 aa1.36□□□□□ -2.19
CACUL1-202ENST00000477583 PBRM1Q86U86 1689 aa1.36□□□□□ -2.19
CACUL1-202ENST00000477583 IGLV3-12A0A075B6K2 115 aa1.36□□□□□ -2.19
CACUL1-202ENST00000477583 IGKV1-8A0A0C4DH67 115 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms