RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 LOC390937A0A1W2PQ73 354 aa7.09□□□□□ -1.27
HDAC6-221ENST00000477561 TRIM64CA6NLI5 447 aa7.09□□□□□ -1.27
HDAC6-221ENST00000477561 C12orf71A8MTZ7 269 aa7.09□□□□□ -1.27
HDAC6-221ENST00000477561 VWC2LB2RUY7 222 aa7.09□□□□□ -1.27
HDAC6-221ENST00000477561 PTGES3LE9PB15 166 aa7.09□□□□□ -1.27
HDAC6-221ENST00000477561 ARPC3O15145 178 aa7.09□□□□□ -1.27
HDAC6-221ENST00000477561 PRODHO43272 600 aa7.09□□□□□ -1.27
HDAC6-221ENST00000477561 RGS10O43665 173 aa7.09□□□□□ -1.27
HDAC6-221ENST00000477561 CD5LO43866 347 aa7.09□□□□□ -1.27
HDAC6-221ENST00000477561 PRKYO43930 277 aa7.09□□□□□ -1.27
HDAC6-221ENST00000477561 ENTPD6O75354 484 aa7.09□□□□□ -1.27
HDAC6-221ENST00000477561 KHDRBS3O75525 346 aaKnown RBP7.09□□□□□ -1.27
HDAC6-221ENST00000477561 HPXP02790 462 aa7.09□□□□□ -1.27
HDAC6-221ENST00000477561 ERCC1P07992 297 aaPredicted RBP7.09□□□□□ -1.27
HDAC6-221ENST00000477561 CSF3P09919 207 aa7.09□□□□□ -1.27
HDAC6-221ENST00000477561 PIPP12273 146 aaPredicted RBP7.09□□□□□ -1.27
HDAC6-221ENST00000477561 PAICSP22234 425 aaKnown RBP7.09□□□□□ -1.27
HDAC6-221ENST00000477561 USF1P22415 310 aaPredicted RBP7.09□□□□□ -1.27
HDAC6-221ENST00000477561 COL8A2P25067 703 aa7.09□□□□□ -1.27
HDAC6-221ENST00000477561 NR4A2P43354 598 aa7.09□□□□□ -1.27
HDAC6-221ENST00000477561 EVX1P49640 407 aa7.09□□□□□ -1.27
HDAC6-221ENST00000477561 PCBD1P61457 104 aa7.09□□□□□ -1.27
HDAC6-221ENST00000477561 EFNB1P98172 346 aa7.09□□□□□ -1.27
HDAC6-221ENST00000477561 NKPD1Q17RQ9 610 aa7.09□□□□□ -1.27
HDAC6-221ENST00000477561 SLC35F1Q5T1Q4 408 aa7.09□□□□□ -1.27
HDAC6-221ENST00000477561 GPR139Q6DWJ6 353 aa7.09□□□□□ -1.27
HDAC6-221ENST00000477561 LAIR2Q6ISS4 152 aa7.09□□□□□ -1.27
HDAC6-221ENST00000477561 LEG1Q6P5S2 330 aa7.09□□□□□ -1.27
HDAC6-221ENST00000477561 GID4Q8IVV7 300 aa7.09□□□□□ -1.27
HDAC6-221ENST00000477561 ALDH16A1Q8IZ83 802 aa7.09□□□□□ -1.27
HDAC6-221ENST00000477561 ZNF101Q8IZC7 436 aa7.09□□□□□ -1.27
HDAC6-221ENST00000477561 STX19Q8N4C7 294 aa7.09□□□□□ -1.27
HDAC6-221ENST00000477561 SVOPQ8N4V2 548 aa7.09□□□□□ -1.27
HDAC6-221ENST00000477561 OR4K13Q8NH42 304 aa7.09□□□□□ -1.27
HDAC6-221ENST00000477561 SYNPRQ8TBG9 265 aa7.09□□□□□ -1.27
HDAC6-221ENST00000477561 UBASH3BQ8TF42 649 aa7.09□□□□□ -1.27
HDAC6-221ENST00000477561 C11orf40Q8WZ69 217 aa7.09□□□□□ -1.27
HDAC6-221ENST00000477561 GTF3AQ92664 365 aaKnown RBP7.09□□□□□ -1.27
HDAC6-221ENST00000477561 NMNAT3Q96T66 252 aa7.09□□□□□ -1.27
HDAC6-221ENST00000477561 BCL2L14Q9BZR8 327 aa7.09□□□□□ -1.27
HDAC6-221ENST00000477561 BPESC1Q9GZL8 116 aa7.09□□□□□ -1.27
HDAC6-221ENST00000477561 MS4A5Q9H3V2 200 aa7.09□□□□□ -1.27
HDAC6-221ENST00000477561 DUSP21Q9H596 190 aa7.09□□□□□ -1.27
HDAC6-221ENST00000477561 SRA1Q9HD15 236 aaKnown RBP7.09□□□□□ -1.27
HDAC6-221ENST00000477561 CMC2Q9NRP2 79 aa7.09□□□□□ -1.27
HDAC6-221ENST00000477561 VSX1Q9NZR4 365 aaPredicted RBP7.09□□□□□ -1.27
HDAC6-221ENST00000477561 EIF3KQ9UBQ5 218 aaKnown RBP7.09□□□□□ -1.27
HDAC6-221ENST00000477561 PSORS1C1Q9UIG5 152 aa7.09□□□□□ -1.27
HDAC6-221ENST00000477561 FBXO9Q9UK97 447 aaPredicted RBP7.09□□□□□ -1.27
HDAC6-221ENST00000477561 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.09□□□□□ -1.27
HDAC6-221ENST00000477561 CR1P17927 2039 aa7.09□□□□□ -1.27
HDAC6-221ENST00000477561 NSD1Q96L73 2696 aaPredicted RBP7.09□□□□□ -1.27
HDAC6-221ENST00000477561 FN1P02751 2386 aaKnown RBP7.09□□□□□ -1.28
HDAC6-221ENST00000477561 LRP5LA4QPB2 252 aa7.08□□□□□ -1.28
HDAC6-221ENST00000477561 PRR23D1E9PI22 279 aaPredicted RBP7.08□□□□□ -1.28
HDAC6-221ENST00000477561 M0R129 80 aa7.08□□□□□ -1.28
HDAC6-221ENST00000477561 NDUFS8O00217 210 aa7.08□□□□□ -1.28
HDAC6-221ENST00000477561 DCTN6O00399 190 aa7.08□□□□□ -1.28
HDAC6-221ENST00000477561 AHCYL1O43865 530 aa7.08□□□□□ -1.28
HDAC6-221ENST00000477561 XPNPEP2O43895 674 aa7.08□□□□□ -1.28
HDAC6-221ENST00000477561 TXNDC12O95881 172 aa7.08□□□□□ -1.28
HDAC6-221ENST00000477561 NGFP01138 241 aa7.08□□□□□ -1.28
HDAC6-221ENST00000477561 PRR23D2P0DMB1 279 aaPredicted RBP7.08□□□□□ -1.28
HDAC6-221ENST00000477561 ZNF250P15622 560 aa7.08□□□□□ -1.28
HDAC6-221ENST00000477561 HIST1H1CP16403 213 aaKnown RBP7.08□□□□□ -1.28
HDAC6-221ENST00000477561 MPV17P39210 176 aa7.08□□□□□ -1.28
HDAC6-221ENST00000477561 MAGEB1P43366 347 aa7.08□□□□□ -1.28
HDAC6-221ENST00000477561 CDH15P55291 814 aa7.08□□□□□ -1.28
HDAC6-221ENST00000477561 KLF3P57682 345 aaPredicted RBP7.08□□□□□ -1.28
HDAC6-221ENST00000477561 SELENOVP59797 346 aa7.08□□□□□ -1.28
HDAC6-221ENST00000477561 SLC35A2P78381 396 aa7.08□□□□□ -1.28
HDAC6-221ENST00000477561 MVKQ03426 396 aa7.08□□□□□ -1.28
HDAC6-221ENST00000477561 TMED1Q13445 227 aa7.08□□□□□ -1.28
HDAC6-221ENST00000477561 SMN1Q16637 294 aaKnown RBP7.08□□□□□ -1.28
HDAC6-221ENST00000477561 MEP1BQ16820 701 aa7.08□□□□□ -1.28
HDAC6-221ENST00000477561 KLHL22Q53GT1 634 aa7.08□□□□□ -1.28
HDAC6-221ENST00000477561 ELFN2Q5R3F8 820 aa7.08□□□□□ -1.28
HDAC6-221ENST00000477561 NXNL2Q5VZ03 156 aa7.08□□□□□ -1.28
HDAC6-221ENST00000477561 AHSA2Q719I0 299 aa7.08□□□□□ -1.28
HDAC6-221ENST00000477561 CXXC5Q7LFL8 322 aaKnown RBP7.08□□□□□ -1.28
HDAC6-221ENST00000477561 PRSS48Q7RTY5 328 aa7.08□□□□□ -1.28
HDAC6-221ENST00000477561 JAZF1Q86VZ6 243 aa7.08□□□□□ -1.28
HDAC6-221ENST00000477561 GLB1L2Q8IW92 636 aa7.08□□□□□ -1.28
HDAC6-221ENST00000477561 SDR9C7Q8NEX9 313 aa7.08□□□□□ -1.28
HDAC6-221ENST00000477561 OR52E2Q8NGJ4 325 aa7.08□□□□□ -1.28
HDAC6-221ENST00000477561 ABHD4Q8TB40 342 aa7.08□□□□□ -1.28
HDAC6-221ENST00000477561 SLC25A40Q8TBP6 338 aa7.08□□□□□ -1.28
HDAC6-221ENST00000477561 SLC7A6Q92536 515 aa7.08□□□□□ -1.28
HDAC6-221ENST00000477561 GGHQ92820 318 aa7.08□□□□□ -1.28
HDAC6-221ENST00000477561 ZNF582Q96NG8 517 aaPredicted RBP7.08□□□□□ -1.28
HDAC6-221ENST00000477561 COPS4Q9BT78 406 aa7.08□□□□□ -1.28
HDAC6-221ENST00000477561 OR2J1Q9GZK6 312 aa7.08□□□□□ -1.28
HDAC6-221ENST00000477561 CCDC90BQ9GZT6 254 aa7.08□□□□□ -1.28
HDAC6-221ENST00000477561 MYOZ1Q9NP98 299 aaPredicted RBP7.08□□□□□ -1.28
HDAC6-221ENST00000477561 RPRD1BQ9NQG5 326 aaKnown RBP7.08□□□□□ -1.28
HDAC6-221ENST00000477561 DNAJC27Q9NZQ0 273 aa7.08□□□□□ -1.28
HDAC6-221ENST00000477561 NDUFA13Q9P0J0 144 aa7.08□□□□□ -1.28
HDAC6-221ENST00000477561 ASH2LQ9UBL3 628 aa7.08□□□□□ -1.28
HDAC6-221ENST00000477561 AASSQ9UDR5 926 aa7.08□□□□□ -1.28
HDAC6-221ENST00000477561 B9D1Q9UPM9 204 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms