RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 PRSS3P35030 304 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 SNCAP37840 140 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 SLC11A2P49281 568 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 ZNF84P51523 738 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 LIM2P55344 173 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 TAS2R20P59543 309 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 RBX1P62877 108 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 SLC35A1P78382 337 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 ZNF763Q0D2J5 394 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 RUNX2Q13950 521 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 ZNF235Q14590 738 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 RAB35Q15286 201 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 DECR1Q16698 335 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 GUK1Q16774 197 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 ATP6V1FQ16864 119 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 ZNF674Q2M3X9 581 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 PGGHGQ32M88 737 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 PCGF3Q3KNV8 242 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 CTXN3Q4LDR2 81 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 KHDC3LQ587J8 217 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 MS4A13Q5J8X5 152 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 CTSL3PQ5NE16 218 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 PRAMEF17Q5VTA0 474 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 DCAF12L2Q5VW00 463 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 KHDRBS2Q5VWX1 349 aaKnown RBP4.22□□□□□ -1.73
PTCD3-212ENST00000477520 WSCD1Q658N2 575 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 TMEM200BQ69YZ2 307 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 OR2A2Q6IF42 318 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 PWWP2BQ6NUJ5 590 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 STEAP1BQ6NZ63 245 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 MTFR2Q6P444 385 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 TNFAIP8L2Q6P589 184 aaPredicted RBP4.22□□□□□ -1.73
PTCD3-212ENST00000477520 CFAP161Q6P656 301 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 PRSS54Q6PEW0 395 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 PODNL1Q6PEZ8 512 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 ARL9Q6T311 187 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 WDR88Q6ZMY6 472 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 CLEC20AQ6ZU45 233 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 MTSS1LQ765P7 747 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 SLC35E3Q7Z769 313 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 LRRTM1Q86UE6 522 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 SLC25A42Q86VD7 318 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 ZNF664Q8N3J9 261 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 SIDT2Q8NBJ9 832 aaKnown RBP4.22□□□□□ -1.73
PTCD3-212ENST00000477520 MORN4Q8NDC4 146 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 OR4E2Q8NGC2 313 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 OR4C16Q8NGL9 310 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 OR2T27Q8NH04 317 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 NUBPLQ8TB37 319 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 LGALS14Q8TCE9 139 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 HASPINQ8TF76 798 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 C16orf78Q8WTQ4 265 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 C2orf15Q8WU43 125 aaKnown RBP4.22□□□□□ -1.73
PTCD3-212ENST00000477520 FAM216AQ8WUB2 273 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 OR5P2Q8WZ92 322 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 ANKRD9Q96BM1 317 aaPredicted RBP4.22□□□□□ -1.73
PTCD3-212ENST00000477520 MUCL1Q96DR8 90 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 SMIM19Q96E16 107 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 NEURL3Q96EH8 262 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 SMIM12Q96EX1 92 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 APIPQ96GX9 242 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 TMEM19Q96HH6 336 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 AKR1E2Q96JD6 320 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 ZNF75AQ96N20 296 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 IMMP2LQ96T52 175 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 PAAF1Q9BRP4 392 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 URM1Q9BTM9 101 aaKnown RBP4.22□□□□□ -1.73
PTCD3-212ENST00000477520 MLST8Q9BVC4 326 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 SNHG12Q9BXW3 62 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 CTDSP1Q9GZU7 261 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 WDR13Q9H1Z4 485 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 HIPK2Q9H2X6 1198 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 OR51I1Q9H343 314 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 HRH4Q9H3N8 390 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 PLK3Q9H4B4 646 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 AUNIPQ9H7T9 357 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 PLEKHA2Q9HB19 425 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 CSNK1G1Q9HCP0 422 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 BCL2L10Q9HD36 194 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 RAB18Q9NP72 206 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 SPHK2Q9NRA0 654 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 KLK11Q9UBX7 282 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 NOP16Q9Y3C1 178 aaKnown RBP4.22□□□□□ -1.73
PTCD3-212ENST00000477520 HDGFL3Q9Y3E1 203 aa4.22□□□□□ -1.73
PTCD3-212ENST00000477520 RANBP2P49792 3224 aaKnown RBP4.22□□□□□ -1.73
PTCD3-212ENST00000477520 ARHGEF17Q96PE2 2063 aaPredicted RBP4.22□□□□□ -1.73
PTCD3-212ENST00000477520 LAMA2P24043 3122 aaKnown RBP4.21□□□□□ -1.73
PTCD3-212ENST00000477520 KIAA1671Q9BY89 1806 aa4.21□□□□□ -1.74
PTCD3-212ENST00000477520 VWA8A3KMH1 1905 aa4.21□□□□□ -1.74
PTCD3-212ENST00000477520 IGLV3-10A0A075B6K4 115 aa4.21□□□□□ -1.74
PTCD3-212ENST00000477520 TRBV24-1A0A075B6N3 115 aa4.21□□□□□ -1.74
PTCD3-212ENST00000477520 BORCS7-ASMTA0A0B4J1R7 106 aa4.21□□□□□ -1.74
PTCD3-212ENST00000477520 TRAV39A0A0B4J263 110 aa4.21□□□□□ -1.74
PTCD3-212ENST00000477520 KIR2DL5BA0A0G2JN68 375 aa4.21□□□□□ -1.74
PTCD3-212ENST00000477520 A0A0G2JNJ9 132 aa4.21□□□□□ -1.74
PTCD3-212ENST00000477520 KIR2DL5BA0A0G2JPC4 375 aa4.21□□□□□ -1.74
PTCD3-212ENST00000477520 TRBV11-1A0A0K0K1C0 115 aa4.21□□□□□ -1.74
PTCD3-212ENST00000477520 hCG_1809904A0A1W2PP81 198 aa4.21□□□□□ -1.74
PTCD3-212ENST00000477520 A0A1W2PR64 198 aa4.21□□□□□ -1.74
PTCD3-212ENST00000477520 A0A1W2PRV1 198 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms