RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 MAKP20794 623 aa6.13□□□□□ -1.43
BRCA1-214ENST00000477152 PRTN3P24158 256 aa6.13□□□□□ -1.43
BRCA1-214ENST00000477152 MDH2P40926 338 aaKnown RBP6.13□□□□□ -1.43
BRCA1-214ENST00000477152 SRP9P49458 86 aaKnown RBP6.13□□□□□ -1.43
BRCA1-214ENST00000477152 MMP15P51511 669 aa6.13□□□□□ -1.43
BRCA1-214ENST00000477152 BPIFB3P59826 476 aa6.13□□□□□ -1.43
BRCA1-214ENST00000477152 CTXN1P60606 82 aa6.13□□□□□ -1.43
BRCA1-214ENST00000477152 ERVK-25P63136 954 aa6.13□□□□□ -1.43
BRCA1-214ENST00000477152 PSG4Q00888 419 aa6.13□□□□□ -1.43
BRCA1-214ENST00000477152 ARMC4Q5T2S8 1044 aa6.13□□□□□ -1.43
BRCA1-214ENST00000477152 SLC25A47Q6Q0C1 308 aa6.13□□□□□ -1.43
BRCA1-214ENST00000477152 DOK3Q7L591 496 aa6.13□□□□□ -1.43
BRCA1-214ENST00000477152 CYP4Z1Q86W10 505 aa6.13□□□□□ -1.43
BRCA1-214ENST00000477152 AKR7LQ8NHP1 331 aa6.13□□□□□ -1.43
BRCA1-214ENST00000477152 LRTOMTQ8WZ04 291 aa6.13□□□□□ -1.43
BRCA1-214ENST00000477152 PTP4A1Q93096 173 aa6.13□□□□□ -1.43
BRCA1-214ENST00000477152 TAMM41Q96BW9 452 aa6.13□□□□□ -1.43
BRCA1-214ENST00000477152 BPIFA2Q96DR5 249 aa6.13□□□□□ -1.43
BRCA1-214ENST00000477152 TSPAN32Q96QS1 320 aa6.13□□□□□ -1.43
BRCA1-214ENST00000477152 FNDC11Q9BVV2 318 aa6.13□□□□□ -1.43
BRCA1-214ENST00000477152 PATZ1Q9HBE1 687 aaKnown RBP6.13□□□□□ -1.43
BRCA1-214ENST00000477152 MEPEQ9NQ76 525 aaPredicted RBP6.13□□□□□ -1.43
BRCA1-214ENST00000477152 TMEM106BQ9NUM4 274 aa6.13□□□□□ -1.43
BRCA1-214ENST00000477152 MIOXQ9UGB7 285 aa6.13□□□□□ -1.43
BRCA1-214ENST00000477152 PURGQ9UJV8 347 aaKnown RBP6.13□□□□□ -1.43
BRCA1-214ENST00000477152 PPP1R3CQ9UQK1 317 aa6.13□□□□□ -1.43
BRCA1-214ENST00000477152 TMEM5Q9Y2B1 443 aa6.13□□□□□ -1.43
BRCA1-214ENST00000477152 C9orf118A6NHY6 69 aa6.12□□□□□ -1.43
BRCA1-214ENST00000477152 F2RL2O00254 374 aa6.12□□□□□ -1.43
BRCA1-214ENST00000477152 NDUFAB1O14561 156 aa6.12□□□□□ -1.43
BRCA1-214ENST00000477152 LYPD3O95274 346 aa6.12□□□□□ -1.43
BRCA1-214ENST00000477152 SLC2A10O95528 541 aa6.12□□□□□ -1.43
BRCA1-214ENST00000477152 CRYBA1P05813 215 aa6.12□□□□□ -1.43
BRCA1-214ENST00000477152 RAP2AP10114 183 aa6.12□□□□□ -1.43
BRCA1-214ENST00000477152 TROVE2P10155 538 aaKnown RBP eCLIP6.12□□□□□ -1.43
BRCA1-214ENST00000477152 EGR1P18146 543 aa6.12□□□□□ -1.43
BRCA1-214ENST00000477152 LAP3P28838 519 aa6.12□□□□□ -1.43
BRCA1-214ENST00000477152 CDAP32320 146 aa6.12□□□□□ -1.43
BRCA1-214ENST00000477152 RPL4P36578 427 aaKnown RBP6.12□□□□□ -1.43
BRCA1-214ENST00000477152 BTG1P62324 171 aa6.12□□□□□ -1.43
BRCA1-214ENST00000477152 ZNF154Q13106 437 aa6.12□□□□□ -1.43
BRCA1-214ENST00000477152 TRAM2Q15035 370 aa6.12□□□□□ -1.43
BRCA1-214ENST00000477152 KCNJ8Q15842 424 aa6.12□□□□□ -1.43
BRCA1-214ENST00000477152 TTMPQ5BVD1 217 aa6.12□□□□□ -1.43
BRCA1-214ENST00000477152 ZNF362Q5T0B9 420 aaPredicted RBP6.12□□□□□ -1.43
BRCA1-214ENST00000477152 SPATA46Q5T0L3 261 aa6.12□□□□□ -1.43
BRCA1-214ENST00000477152 XP32Q5T750 250 aa6.12□□□□□ -1.43
BRCA1-214ENST00000477152 NANOGP8Q6NSW7 305 aa6.12□□□□□ -1.43
BRCA1-214ENST00000477152 DNM1P34Q6PK57 102 aa6.12□□□□□ -1.43
BRCA1-214ENST00000477152 ARPINQ7Z6K5 226 aa6.12□□□□□ -1.43
BRCA1-214ENST00000477152 OAFQ86UD1 273 aa6.12□□□□□ -1.43
BRCA1-214ENST00000477152 RBM45Q8IUH3 476 aaKnown RBP6.12□□□□□ -1.43
BRCA1-214ENST00000477152 CMTM4Q8IZR5 234 aa6.12□□□□□ -1.43
BRCA1-214ENST00000477152 C10orf111Q8N326 155 aa6.12□□□□□ -1.43
BRCA1-214ENST00000477152 OR2Z1Q8NG97 314 aa6.12□□□□□ -1.43
BRCA1-214ENST00000477152 TMEM255BQ8WV15 326 aa6.12□□□□□ -1.43
BRCA1-214ENST00000477152 HDAC2Q92769 488 aaKnown RBP6.12□□□□□ -1.43
BRCA1-214ENST00000477152 PRRC1Q96M27 445 aa6.12□□□□□ -1.43
BRCA1-214ENST00000477152 ARPC5LQ9BPX5 153 aa6.12□□□□□ -1.43
BRCA1-214ENST00000477152 PRSS27Q9BQR3 290 aa6.12□□□□□ -1.43
BRCA1-214ENST00000477152 TMEM140Q9NV12 185 aa6.12□□□□□ -1.43
BRCA1-214ENST00000477152 PPIAL4AQ9Y536 164 aa6.12□□□□□ -1.43
BRCA1-214ENST00000477152 A8MXK9 166 aa6.11□□□□□ -1.43
BRCA1-214ENST00000477152 EFCAB9A8MZ26 197 aa6.11□□□□□ -1.43
BRCA1-214ENST00000477152 CLDN34H7C241 214 aa6.11□□□□□ -1.43
BRCA1-214ENST00000477152 SLC16A6O15403 523 aa6.11□□□□□ -1.43
BRCA1-214ENST00000477152 SGCEO43556 437 aa6.11□□□□□ -1.43
BRCA1-214ENST00000477152 DOK2O60496 412 aa6.11□□□□□ -1.43
BRCA1-214ENST00000477152 GASTP01350 101 aa6.11□□□□□ -1.43
BRCA1-214ENST00000477152 IGHV2-70P01814 119 aa6.11□□□□□ -1.43
BRCA1-214ENST00000477152 IFNW1P05000 195 aa6.11□□□□□ -1.43
BRCA1-214ENST00000477152 CD1AP06126 327 aa6.11□□□□□ -1.43
BRCA1-214ENST00000477152 TSPAN19P0C672 248 aa6.11□□□□□ -1.43
BRCA1-214ENST00000477152 ZNF12P17014 697 aa6.11□□□□□ -1.43
BRCA1-214ENST00000477152 KITLGP21583 273 aa6.11□□□□□ -1.43
BRCA1-214ENST00000477152 HTR5AP47898 357 aa6.11□□□□□ -1.43
BRCA1-214ENST00000477152 AQP6Q13520 282 aa6.11□□□□□ -1.43
BRCA1-214ENST00000477152 BEND6Q5SZJ8 279 aaPredicted RBP6.11□□□□□ -1.43
BRCA1-214ENST00000477152 LRRC28Q86X40 367 aaPredicted RBP6.11□□□□□ -1.43
BRCA1-214ENST00000477152 NKAIN4Q8IVV8 208 aa6.11□□□□□ -1.43
BRCA1-214ENST00000477152 ZNF283Q8N7M2 679 aa6.11□□□□□ -1.43
BRCA1-214ENST00000477152 SIGLECL1Q8N7X8 197 aa6.11□□□□□ -1.43
BRCA1-214ENST00000477152 ZDHHC22Q8N966 263 aa6.11□□□□□ -1.43
BRCA1-214ENST00000477152 ATG16L2Q8NAA4 619 aa6.11□□□□□ -1.43
BRCA1-214ENST00000477152 OR52E2Q8NGJ4 325 aa6.11□□□□□ -1.43
BRCA1-214ENST00000477152 OR13G1Q8NGZ3 307 aa6.11□□□□□ -1.43
BRCA1-214ENST00000477152 PFN4Q8NHR9 129 aa6.11□□□□□ -1.43
BRCA1-214ENST00000477152 NABP1Q96AH0 204 aa6.11□□□□□ -1.43
BRCA1-214ENST00000477152 ZBTB9Q96C00 473 aa6.11□□□□□ -1.43
BRCA1-214ENST00000477152 LRRC58Q96CX6 371 aa6.11□□□□□ -1.43
BRCA1-214ENST00000477152 RASD2Q96D21 266 aa6.11□□□□□ -1.43
BRCA1-214ENST00000477152 TPD52L3Q96J77 140 aa6.11□□□□□ -1.43
BRCA1-214ENST00000477152 WFDC6Q9BQY6 131 aa6.11□□□□□ -1.43
BRCA1-214ENST00000477152 SLITRK2Q9H156 845 aa6.11□□□□□ -1.43
BRCA1-214ENST00000477152 ARGLU1Q9NWB6 273 aaPredicted RBP6.11□□□□□ -1.43
BRCA1-214ENST00000477152 ATPIF1Q9UII2 106 aa6.11□□□□□ -1.43
BRCA1-214ENST00000477152 KLHL21Q9UJP4 597 aa6.11□□□□□ -1.43
BRCA1-214ENST00000477152 INSIG2Q9Y5U4 225 aa6.11□□□□□ -1.43
BRCA1-214ENST00000477152 WNK2Q9Y3S1 2297 aa6.11□□□□□ -1.43
BRCA1-214ENST00000477152 LOC100509620A0A075B734 347 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms