RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 CTXN1P60606 82 aa9.36□□□□□ -0.91
BRCA1-213ENST00000476777 RAP1BP61224 184 aa9.36□□□□□ -0.91
BRCA1-213ENST00000476777 ARF6P62330 175 aa9.36□□□□□ -0.91
BRCA1-213ENST00000476777 LCN6P62502 163 aa9.36□□□□□ -0.91
BRCA1-213ENST00000476777 RAP1AP62834 184 aa9.36□□□□□ -0.91
BRCA1-213ENST00000476777 DBPQ10586 325 aaPredicted RBP9.36□□□□□ -0.91
BRCA1-213ENST00000476777 PIN1Q13526 163 aaPredicted RBP9.36□□□□□ -0.91
BRCA1-213ENST00000476777 FHL1Q13642 323 aa9.36□□□□□ -0.91
BRCA1-213ENST00000476777 SELPLGQ14242 412 aa9.36□□□□□ -0.91
BRCA1-213ENST00000476777 CCDC92Q53HC0 331 aaPredicted RBP9.36□□□□□ -0.91
BRCA1-213ENST00000476777 OXLD1Q5BKU9 147 aa9.36□□□□□ -0.91
BRCA1-213ENST00000476777 SLC35E4Q6ICL7 350 aa9.36□□□□□ -0.91
BRCA1-213ENST00000476777 GALNT4Q8N4A0 578 aa9.36□□□□□ -0.91
BRCA1-213ENST00000476777 CELF2-AS1Q8N7Q2 184 aa9.36□□□□□ -0.91
BRCA1-213ENST00000476777 OR11L1Q8NGX0 322 aa9.36□□□□□ -0.91
BRCA1-213ENST00000476777 OR1F12Q8NHA8 337 aa9.36□□□□□ -0.91
BRCA1-213ENST00000476777 ERGIC1Q969X5 290 aa9.36□□□□□ -0.91
BRCA1-213ENST00000476777 SEMA6AQ9H2E6 1030 aa9.36□□□□□ -0.91
BRCA1-213ENST00000476777 CENPHQ9H3R5 247 aa9.36□□□□□ -0.91
BRCA1-213ENST00000476777 NECAP2Q9NVZ3 263 aa9.36□□□□□ -0.91
BRCA1-213ENST00000476777 AURKAIP1Q9NWT8 199 aaPredicted RBP9.36□□□□□ -0.91
BRCA1-213ENST00000476777 ZNRD1Q9P1U0 126 aa9.36□□□□□ -0.91
BRCA1-213ENST00000476777 FBLN5Q9UBX5 448 aa9.36□□□□□ -0.91
BRCA1-213ENST00000476777 RIMS3Q9UJD0 308 aa9.36□□□□□ -0.91
BRCA1-213ENST00000476777 MED31Q9Y3C7 131 aa9.36□□□□□ -0.91
BRCA1-213ENST00000476777 FAM96BQ9Y3D0 163 aa9.36□□□□□ -0.91
BRCA1-213ENST00000476777 USH1CQ9Y6N9 552 aa9.36□□□□□ -0.91
BRCA1-213ENST00000476777 DNAH9Q9NYC9 4486 aa9.35□□□□□ -0.91
BRCA1-213ENST00000476777 BTBD17A6NE02 478 aa9.35□□□□□ -0.91
BRCA1-213ENST00000476777 LGALS8O00214 317 aa9.35□□□□□ -0.91
BRCA1-213ENST00000476777 TNFRSF1BP20333 461 aa9.35□□□□□ -0.91
BRCA1-213ENST00000476777 FPR3P25089 353 aa9.35□□□□□ -0.91
BRCA1-213ENST00000476777 GABRA5P31644 462 aa9.35□□□□□ -0.91
BRCA1-213ENST00000476777 MTPNP58546 118 aa9.35□□□□□ -0.91
BRCA1-213ENST00000476777 AQP6Q13520 282 aa9.35□□□□□ -0.91
BRCA1-213ENST00000476777 MPPED2Q15777 294 aa9.35□□□□□ -0.91
BRCA1-213ENST00000476777 KCNJ8Q15842 424 aa9.35□□□□□ -0.91
BRCA1-213ENST00000476777 INTS11Q5TA45 600 aaKnown RBP9.35□□□□□ -0.91
BRCA1-213ENST00000476777 PRAMEF6Q5VXH4 476 aa9.35□□□□□ -0.91
BRCA1-213ENST00000476777 OTPQ5XKR4 325 aa9.35□□□□□ -0.91
BRCA1-213ENST00000476777 SFRP4Q6FHJ7 346 aaPredicted RBP9.35□□□□□ -0.91
BRCA1-213ENST00000476777 MREGQ8N565 214 aa9.35□□□□□ -0.91
BRCA1-213ENST00000476777 SLC26A7Q8TE54 656 aa9.35□□□□□ -0.91
BRCA1-213ENST00000476777 CFHR4Q92496 578 aa9.35□□□□□ -0.91
BRCA1-213ENST00000476777 APOBEC3DQ96AK3 386 aaPredicted RBP9.35□□□□□ -0.91
BRCA1-213ENST00000476777 ZBTB9Q96C00 473 aa9.35□□□□□ -0.91
BRCA1-213ENST00000476777 ECSITQ9BQ95 431 aa9.35□□□□□ -0.91
BRCA1-213ENST00000476777 RASSF4Q9H2L5 321 aa9.35□□□□□ -0.91
BRCA1-213ENST00000476777 UFSP2Q9NUQ7 469 aa9.35□□□□□ -0.91
BRCA1-213ENST00000476777 ATPIF1Q9UII2 106 aa9.35□□□□□ -0.91
BRCA1-213ENST00000476777 SIGLEC9Q9Y336 463 aa9.35□□□□□ -0.91
BRCA1-213ENST00000476777 SH3GLB1Q9Y371 365 aa9.35□□□□□ -0.91
BRCA1-213ENST00000476777 TRAV27A0A087WT01 109 aa9.34□□□□□ -0.91
BRCA1-213ENST00000476777 TMEM120BA0PK00 339 aa9.34□□□□□ -0.91
BRCA1-213ENST00000476777 ELOVL7A1L3X0 281 aa9.34□□□□□ -0.91
BRCA1-213ENST00000476777 RNASEK-C17orf49H0YIS7 233 aa9.34□□□□□ -0.91
BRCA1-213ENST00000476777 RER1O15258 196 aa9.34□□□□□ -0.91
BRCA1-213ENST00000476777 ADAM20O43506 726 aa9.34□□□□□ -0.91
BRCA1-213ENST00000476777 OR10H3O60404 316 aa9.34□□□□□ -0.91
BRCA1-213ENST00000476777 SHOX2O60902 331 aaPredicted RBP9.34□□□□□ -0.91
BRCA1-213ENST00000476777 FBP1P09467 338 aa9.34□□□□□ -0.91
BRCA1-213ENST00000476777 CTLA4P16410 223 aa9.34□□□□□ -0.91
BRCA1-213ENST00000476777 CD200P41217 278 aa9.34□□□□□ -0.91
BRCA1-213ENST00000476777 EFNB2P52799 333 aa9.34□□□□□ -0.91
BRCA1-213ENST00000476777 PRSS12P56730 875 aa9.34□□□□□ -0.91
BRCA1-213ENST00000476777 C11orf91Q3C1V1 193 aa9.34□□□□□ -0.91
BRCA1-213ENST00000476777 CDONQ4KMG0 1287 aa9.34□□□□□ -0.91
BRCA1-213ENST00000476777 AGKQ53H12 422 aa9.34□□□□□ -0.91
BRCA1-213ENST00000476777 BTN2A1Q7KYR7 527 aa9.34□□□□□ -0.91
BRCA1-213ENST00000476777 VMO1Q7Z5L0 202 aa9.34□□□□□ -0.91
BRCA1-213ENST00000476777 C11orf44Q8N8P7 122 aa9.34□□□□□ -0.91
BRCA1-213ENST00000476777 OR51A7Q8NH64 312 aa9.34□□□□□ -0.91
BRCA1-213ENST00000476777 RASSF5Q8WWW0 418 aa9.34□□□□□ -0.91
BRCA1-213ENST00000476777 SGCDQ92629 289 aa9.34□□□□□ -0.91
BRCA1-213ENST00000476777 BPIFA2Q96DR5 249 aa9.34□□□□□ -0.91
BRCA1-213ENST00000476777 CGREF1Q99674 301 aa9.34□□□□□ -0.91
BRCA1-213ENST00000476777 POLR2J2Q9GZM3 115 aaKnown RBP9.34□□□□□ -0.91
BRCA1-213ENST00000476777 POLR2J3Q9H1A7 115 aaKnown RBP9.34□□□□□ -0.91
BRCA1-213ENST00000476777 TOR3AQ9H497 397 aa9.34□□□□□ -0.91
BRCA1-213ENST00000476777 KAT8Q9H7Z6 458 aaKnown RBP9.34□□□□□ -0.91
BRCA1-213ENST00000476777 WDR76Q9H967 626 aa9.34□□□□□ -0.91
BRCA1-213ENST00000476777 RNF7Q9UBF6 113 aa9.34□□□□□ -0.91
BRCA1-213ENST00000476777 FOXJ3Q9UPW0 622 aa9.34□□□□□ -0.91
BRCA1-213ENST00000476777 KPTNQ9Y664 436 aa9.34□□□□□ -0.91
BRCA1-213ENST00000476777 TEX13CA0A0J9YWL9 993 aa9.33□□□□□ -0.92
BRCA1-213ENST00000476777 A0A1B0GVI7 797 aa9.33□□□□□ -0.92
BRCA1-213ENST00000476777 ANKRD61A6NGH8 418 aa9.33□□□□□ -0.92
BRCA1-213ENST00000476777 POLR3GO15318 223 aaPredicted RBP9.33□□□□□ -0.92
BRCA1-213ENST00000476777 NDUFA2O43678 99 aa9.33□□□□□ -0.92
BRCA1-213ENST00000476777 XPNPEP2O43895 674 aa9.33□□□□□ -0.92
BRCA1-213ENST00000476777 ECDO95905 644 aaPredicted RBP9.33□□□□□ -0.92
BRCA1-213ENST00000476777 IFI30P13284 250 aa9.33□□□□□ -0.92
BRCA1-213ENST00000476777 IDH3AP50213 366 aa9.33□□□□□ -0.92
BRCA1-213ENST00000476777 LSM6P62312 80 aaKnown RBP9.33□□□□□ -0.92
BRCA1-213ENST00000476777 OR8B8Q15620 311 aa9.33□□□□□ -0.92
BRCA1-213ENST00000476777 RSPO1Q2MKA7 263 aaPredicted RBP9.33□□□□□ -0.92
BRCA1-213ENST00000476777 COLCA1Q6ZS62 124 aa9.33□□□□□ -0.92
BRCA1-213ENST00000476777 C1orf122Q6ZSJ8 110 aa9.33□□□□□ -0.92
BRCA1-213ENST00000476777 CCDC80Q76M96 950 aa9.33□□□□□ -0.92
BRCA1-213ENST00000476777 DHDDSQ86SQ9 333 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms