RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 FBP2O00757 339 aa10.45□□□□□ -0.74
SKA3-206ENST00000475251 MLNRO43193 412 aa10.45□□□□□ -0.74
SKA3-206ENST00000475251 NDUFA2O43678 99 aa10.45□□□□□ -0.74
SKA3-206ENST00000475251 PIP5K1CO60331 668 aa10.45□□□□□ -0.74
SKA3-206ENST00000475251 IGHV1-69P01742 117 aa10.45□□□□□ -0.74
SKA3-206ENST00000475251 IGHV4-59P01825 116 aa10.45□□□□□ -0.74
SKA3-206ENST00000475251 SFTPBP07988 381 aa10.45□□□□□ -0.74
SKA3-206ENST00000475251 MMP9P14780 707 aa10.45□□□□□ -0.74
SKA3-206ENST00000475251 RPL4P36578 427 aaKnown RBP10.45□□□□□ -0.74
SKA3-206ENST00000475251 IER3P46695 156 aa10.45□□□□□ -0.74
SKA3-206ENST00000475251 DHRS7BQ6IAN0 325 aaPredicted RBP10.45□□□□□ -0.74
SKA3-206ENST00000475251 LYPD2Q6UXB3 125 aa10.45□□□□□ -0.74
SKA3-206ENST00000475251 LRRC75AQ8NAA5 344 aa10.45□□□□□ -0.74
SKA3-206ENST00000475251 BHLHE23Q8NDY6 225 aa10.45□□□□□ -0.74
SKA3-206ENST00000475251 OR51A7Q8NH64 312 aa10.45□□□□□ -0.74
SKA3-206ENST00000475251 ZBTB9Q96C00 473 aa10.45□□□□□ -0.74
SKA3-206ENST00000475251 ZNF583Q96ND8 569 aa10.45□□□□□ -0.74
SKA3-206ENST00000475251 TBX15Q96SF7 602 aa10.45□□□□□ -0.74
SKA3-206ENST00000475251 PARD6BQ9BYG5 372 aa10.45□□□□□ -0.74
SKA3-206ENST00000475251 POLR1DQ9Y2S0 133 aa10.45□□□□□ -0.74
SKA3-206ENST00000475251 FAM96BQ9Y3D0 163 aa10.45□□□□□ -0.74
SKA3-206ENST00000475251 TRAV27A0A087WT01 109 aa10.44□□□□□ -0.74
SKA3-206ENST00000475251 IGHV3-64DA0A0J9YX35 117 aa10.44□□□□□ -0.74
SKA3-206ENST00000475251 A0A1B0GWJ7 208 aa10.44□□□□□ -0.74
SKA3-206ENST00000475251 ELOVL7A1L3X0 281 aa10.44□□□□□ -0.74
SKA3-206ENST00000475251 EFCAB9A8MZ26 197 aa10.44□□□□□ -0.74
SKA3-206ENST00000475251 H0YL77 283 aa10.44□□□□□ -0.74
SKA3-206ENST00000475251 H7C1C5 153 aa10.44□□□□□ -0.74
SKA3-206ENST00000475251 PIN1P1O15428 100 aa10.44□□□□□ -0.74
SKA3-206ENST00000475251 SCG5P05408 212 aa10.44□□□□□ -0.74
SKA3-206ENST00000475251 TNFRSF1BP20333 461 aa10.44□□□□□ -0.74
SKA3-206ENST00000475251 CRYBA2P53672 197 aa10.44□□□□□ -0.74
SKA3-206ENST00000475251 RAD23AP54725 363 aa10.44□□□□□ -0.74
SKA3-206ENST00000475251 LCN6P62502 163 aa10.44□□□□□ -0.74
SKA3-206ENST00000475251 FAM201AQ5SY85 155 aa10.44□□□□□ -0.74
SKA3-206ENST00000475251 ERICH5Q6P6B1 374 aa10.44□□□□□ -0.74
SKA3-206ENST00000475251 PGM2L1Q6PCE3 622 aa10.44□□□□□ -0.74
SKA3-206ENST00000475251 Q6ZSV7 163 aa10.44□□□□□ -0.74
SKA3-206ENST00000475251 GLB1L2Q8IW92 636 aa10.44□□□□□ -0.74
SKA3-206ENST00000475251 GALNT4Q8N4A0 578 aa10.44□□□□□ -0.74
SKA3-206ENST00000475251 FAM156AQ8NDB6 213 aa10.44□□□□□ -0.74
SKA3-206ENST00000475251 SLC7A6Q92536 515 aa10.44□□□□□ -0.74
SKA3-206ENST00000475251 LHX4Q969G2 390 aa10.44□□□□□ -0.74
SKA3-206ENST00000475251 PRRC1Q96M27 445 aa10.44□□□□□ -0.74
SKA3-206ENST00000475251 HDHD2Q9H0R4 259 aa10.44□□□□□ -0.74
SKA3-206ENST00000475251 TMCC3Q9ULS5 477 aa10.44□□□□□ -0.74
SKA3-206ENST00000475251 A0A0U1RQK1 487 aa10.43□□□□□ -0.74
SKA3-206ENST00000475251 PRSS37A4D1T9 235 aa10.43□□□□□ -0.74
SKA3-206ENST00000475251 SHOX2O60902 331 aaPredicted RBP10.43□□□□□ -0.74
SKA3-206ENST00000475251 KHDRBS3O75525 346 aaKnown RBP10.43□□□□□ -0.74
SKA3-206ENST00000475251 ECDO95905 644 aaPredicted RBP10.43□□□□□ -0.74
SKA3-206ENST00000475251 CD14P08571 375 aa10.43□□□□□ -0.74
SKA3-206ENST00000475251 DBHP09172 617 aa10.43□□□□□ -0.74
SKA3-206ENST00000475251 TGFBR2P37173 567 aa10.43□□□□□ -0.74
SKA3-206ENST00000475251 PMELP40967 661 aa10.43□□□□□ -0.74
SKA3-206ENST00000475251 CD200P41217 278 aa10.43□□□□□ -0.74
SKA3-206ENST00000475251 OR1E2P47887 323 aa10.43□□□□□ -0.74
SKA3-206ENST00000475251 GZMMP51124 257 aa10.43□□□□□ -0.74
SKA3-206ENST00000475251 PRKCDQ05655 676 aa10.43□□□□□ -0.74
SKA3-206ENST00000475251 CYLC2Q14093 348 aaPredicted RBP10.43□□□□□ -0.74
SKA3-206ENST00000475251 BEAN1Q3B7T3 259 aa10.43□□□□□ -0.74
SKA3-206ENST00000475251 CCDC92Q53HC0 331 aaPredicted RBP10.43□□□□□ -0.74
SKA3-206ENST00000475251 NRMQ8IXM6 262 aa10.43□□□□□ -0.74
SKA3-206ENST00000475251 MICU2Q8IYU8 434 aa10.43□□□□□ -0.74
SKA3-206ENST00000475251 RNF113BQ8IZP6 322 aaKnown RBP10.43□□□□□ -0.74
SKA3-206ENST00000475251 GJC3Q8NFK1 279 aa10.43□□□□□ -0.74
SKA3-206ENST00000475251 NPRL2Q8WTW4 380 aa10.43□□□□□ -0.74
SKA3-206ENST00000475251 ZNF570Q96NI8 536 aa10.43□□□□□ -0.74
SKA3-206ENST00000475251 COQ7Q99807 217 aa10.43□□□□□ -0.74
SKA3-206ENST00000475251 ECSITQ9BQ95 431 aa10.43□□□□□ -0.74
SKA3-206ENST00000475251 SLC22A4Q9H015 551 aa10.43□□□□□ -0.74
SKA3-206ENST00000475251 SIRPDQ9H106 197 aa10.43□□□□□ -0.74
SKA3-206ENST00000475251 FN3KRPQ9HA64 309 aa10.43□□□□□ -0.74
SKA3-206ENST00000475251 RNF7Q9UBF6 113 aa10.43□□□□□ -0.74
SKA3-206ENST00000475251 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.43□□□□□ -0.74
SKA3-206ENST00000475251 V9GYY5 206 aaPredicted RBP10.43□□□□□ -0.74
SKA3-206ENST00000475251 TRAV38-1A0A0B4J264 116 aa10.42□□□□□ -0.74
SKA3-206ENST00000475251 LGALS8O00214 317 aa10.42□□□□□ -0.74
SKA3-206ENST00000475251 RER1O15258 196 aa10.42□□□□□ -0.74
SKA3-206ENST00000475251 ADAM20O43506 726 aa10.42□□□□□ -0.74
SKA3-206ENST00000475251 FAM20BO75063 409 aa10.42□□□□□ -0.74
SKA3-206ENST00000475251 TSPAN9O75954 239 aa10.42□□□□□ -0.74
SKA3-206ENST00000475251 HLA-DPB1P04440 258 aa10.42□□□□□ -0.74
SKA3-206ENST00000475251 FBP1P09467 338 aa10.42□□□□□ -0.74
SKA3-206ENST00000475251 CTLA4P16410 223 aa10.42□□□□□ -0.74
SKA3-206ENST00000475251 MALLQ13021 153 aa10.42□□□□□ -0.74
SKA3-206ENST00000475251 MAB21L1Q13394 359 aa10.42□□□□□ -0.74
SKA3-206ENST00000475251 OR8B8Q15620 311 aa10.42□□□□□ -0.74
SKA3-206ENST00000475251 MESTQ5EB52 335 aa10.42□□□□□ -0.74
SKA3-206ENST00000475251 KPRPQ5T749 579 aaPredicted RBP10.42□□□□□ -0.74
SKA3-206ENST00000475251 Q6ZTK2 550 aa10.42□□□□□ -0.74
SKA3-206ENST00000475251 PLPP7Q8NBV4 271 aa10.42□□□□□ -0.74
SKA3-206ENST00000475251 STON2Q8WXE9 905 aa10.42□□□□□ -0.74
SKA3-206ENST00000475251 LZICQ8WZA0 190 aa10.42□□□□□ -0.74
SKA3-206ENST00000475251 FNDC11Q9BVV2 318 aa10.42□□□□□ -0.74
SKA3-206ENST00000475251 RERGLQ9H628 205 aa10.42□□□□□ -0.74
SKA3-206ENST00000475251 CTSZQ9UBR2 303 aa10.42□□□□□ -0.74
SKA3-206ENST00000475251 VPREB3Q9UKI3 123 aa10.42□□□□□ -0.74
SKA3-206ENST00000475251 RAB21Q9UL25 225 aa10.42□□□□□ -0.74
SKA3-206ENST00000475251 A4GNTQ9UNA3 340 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms