RNA–Protein interactions for RNA: ENST00000475195.5

ATG4B-216, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-216ENST00000475195 MED20Q9H944 212 aa14.03□□□□□ -0.16
ATG4B-216ENST00000475195 CHODLQ9H9P2 273 aa14.03□□□□□ -0.16
ATG4B-216ENST00000475195 TMEFF2Q9UIK5 374 aaPredicted RBP14.03□□□□□ -0.16
ATG4B-216ENST00000475195 PURGQ9UJV8 347 aaKnown RBP14.03□□□□□ -0.16
ATG4B-216ENST00000475195 ZDHHC8Q9ULC8 765 aa14.03□□□□□ -0.16
ATG4B-216ENST00000475195 C2CD3Q4AC94 2353 aa14.03□□□□□ -0.16
ATG4B-216ENST00000475195 HIVEP2P31629 2446 aa14.03□□□□□ -0.16
ATG4B-216ENST00000475195 LYNX1G3V0Z9 82 aa14.02□□□□□ -0.17
ATG4B-216ENST00000475195 H3BNX3 289 aa14.02□□□□□ -0.17
ATG4B-216ENST00000475195 PRODHO43272 600 aa14.02□□□□□ -0.17
ATG4B-216ENST00000475195 RP2O75695 350 aa14.02□□□□□ -0.17
ATG4B-216ENST00000475195 CD55P08174 381 aa14.02□□□□□ -0.17
ATG4B-216ENST00000475195 LYNX1P0DP58 116 aa14.02□□□□□ -0.17
ATG4B-216ENST00000475195 ZNF23P17027 643 aa14.02□□□□□ -0.17
ATG4B-216ENST00000475195 PAICSP22234 425 aaKnown RBP14.02□□□□□ -0.17
ATG4B-216ENST00000475195 ACHEP22303 614 aa14.02□□□□□ -0.17
ATG4B-216ENST00000475195 SLC2A5P22732 501 aa14.02□□□□□ -0.17
ATG4B-216ENST00000475195 TMEM249Q2WGJ8 235 aa14.02□□□□□ -0.17
ATG4B-216ENST00000475195 SLC35D3Q5M8T2 416 aa14.02□□□□□ -0.17
ATG4B-216ENST00000475195 PLBD1Q6P4A8 553 aa14.02□□□□□ -0.17
ATG4B-216ENST00000475195 DCXRQ7Z4W1 244 aa14.02□□□□□ -0.17
ATG4B-216ENST00000475195 NAA40Q86UY6 237 aa14.02□□□□□ -0.17
ATG4B-216ENST00000475195 CPOQ8IVL8 374 aa14.02□□□□□ -0.17
ATG4B-216ENST00000475195 TEX12Q9BXU0 123 aa14.02□□□□□ -0.17
ATG4B-216ENST00000475195 BPESC1Q9GZL8 116 aa14.02□□□□□ -0.17
ATG4B-216ENST00000475195 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.02□□□□□ -0.17
ATG4B-216ENST00000475195 KIF17Q9P2E2 1029 aa14.02□□□□□ -0.17
ATG4B-216ENST00000475195 FN1P02751 2386 aaKnown RBP14.02□□□□□ -0.17
ATG4B-216ENST00000475195 IGHV4-61A0A0C4DH41 118 aa14.01□□□□□ -0.17
ATG4B-216ENST00000475195 PLSCR5A0PG75 271 aa14.01□□□□□ -0.17
ATG4B-216ENST00000475195 CD5LO43866 347 aa14.01□□□□□ -0.17
ATG4B-216ENST00000475195 LILRA1O75019 489 aa14.01□□□□□ -0.17
ATG4B-216ENST00000475195 MITFO75030 526 aaPredicted RBP14.01□□□□□ -0.17
ATG4B-216ENST00000475195 IGHV1-46P01743 117 aa14.01□□□□□ -0.17
ATG4B-216ENST00000475195 GSTT1P30711 240 aa14.01□□□□□ -0.17
ATG4B-216ENST00000475195 TPTEP56180 551 aa14.01□□□□□ -0.17
ATG4B-216ENST00000475195 CCL8P80075 99 aa14.01□□□□□ -0.17
ATG4B-216ENST00000475195 PPP2R2BQ00005 443 aa14.01□□□□□ -0.17
ATG4B-216ENST00000475195 KPNB1Q14974 876 aaKnown RBP14.01□□□□□ -0.17
ATG4B-216ENST00000475195 ZFP1Q6P2D0 407 aa14.01□□□□□ -0.17
ATG4B-216ENST00000475195 Q71RC1 249 aaPredicted RBP14.01□□□□□ -0.17
ATG4B-216ENST00000475195 C10orf67Q8IYJ2 551 aa14.01□□□□□ -0.17
ATG4B-216ENST00000475195 OR6K6Q8NGW6 343 aa14.01□□□□□ -0.17
ATG4B-216ENST00000475195 PYDC1Q8WXC3 89 aa14.01□□□□□ -0.17
ATG4B-216ENST00000475195 GTF3AQ92664 365 aaKnown RBP14.01□□□□□ -0.17
ATG4B-216ENST00000475195 YIPF5Q969M3 257 aa14.01□□□□□ -0.17
ATG4B-216ENST00000475195 SPTSSAQ969W0 71 aa14.01□□□□□ -0.17
ATG4B-216ENST00000475195 SLAMF6Q96DU3 332 aa14.01□□□□□ -0.17
ATG4B-216ENST00000475195 OR51V1Q9H2C8 321 aa14.01□□□□□ -0.17
ATG4B-216ENST00000475195 SEMA6AQ9H2E6 1030 aa14.01□□□□□ -0.17
ATG4B-216ENST00000475195 KRT84Q9NSB2 600 aa14.01□□□□□ -0.17
ATG4B-216ENST00000475195 TVP23BQ9NYZ1 205 aa14.01□□□□□ -0.17
ATG4B-216ENST00000475195 A0A1B0GWJ7 208 aa14□□□□□ -0.17
ATG4B-216ENST00000475195 ZSCAN5BA6NJL1 495 aa14□□□□□ -0.17
ATG4B-216ENST00000475195 ZAR1LA6NP61 321 aa14□□□□□ -0.17
ATG4B-216ENST00000475195 F5H5K5 113 aa14□□□□□ -0.17
ATG4B-216ENST00000475195 TLX2O43763 284 aaPredicted RBP14□□□□□ -0.17
ATG4B-216ENST00000475195 HOXB4P17483 251 aaPredicted RBP14□□□□□ -0.17
ATG4B-216ENST00000475195 EPHA2P29317 976 aa14□□□□□ -0.17
ATG4B-216ENST00000475195 SNAPC1Q16533 368 aa14□□□□□ -0.17
ATG4B-216ENST00000475195 CARTPTQ16568 116 aa14□□□□□ -0.17
ATG4B-216ENST00000475195 ZMAT1Q5H9K5 638 aa14□□□□□ -0.17
ATG4B-216ENST00000475195 SLX4IPQ5VYV7 408 aa14□□□□□ -0.17
ATG4B-216ENST00000475195 DRAM2Q6UX65 266 aa14□□□□□ -0.17
ATG4B-216ENST00000475195 Q6ZR03 302 aa14□□□□□ -0.17
ATG4B-216ENST00000475195 SHFQ7M4L6 423 aa14□□□□□ -0.17
ATG4B-216ENST00000475195 DPY19L4Q7Z388 723 aa14□□□□□ -0.17
ATG4B-216ENST00000475195 RNF133Q8WVZ7 376 aa14□□□□□ -0.17
ATG4B-216ENST00000475195 INTS14Q96SY0 518 aa14□□□□□ -0.17
ATG4B-216ENST00000475195 TEAD3Q99594 435 aa14□□□□□ -0.17
ATG4B-216ENST00000475195 KCNJ15Q99712 375 aa14□□□□□ -0.17
ATG4B-216ENST00000475195 ABHD6Q9BV23 337 aa14□□□□□ -0.17
ATG4B-216ENST00000475195 ENOPH1Q9UHY7 261 aa14□□□□□ -0.17
ATG4B-216ENST00000475195 OAZ3Q9UMX2 235 aa14□□□□□ -0.17
ATG4B-216ENST00000475195 M0R135 149 aa13.99□□□□□ -0.17
ATG4B-216ENST00000475195 SPRY3O43610 288 aa13.99□□□□□ -0.17
ATG4B-216ENST00000475195 TIMM8AO60220 97 aaPredicted RBP13.99□□□□□ -0.17
ATG4B-216ENST00000475195 SPARCP09486 303 aa13.99□□□□□ -0.17
ATG4B-216ENST00000475195 HLXQ14774 488 aaPredicted RBP13.99□□□□□ -0.17
ATG4B-216ENST00000475195 C12orf73Q69YU5 71 aa13.99□□□□□ -0.17
ATG4B-216ENST00000475195 CXXC5Q7LFL8 322 aaKnown RBP13.99□□□□□ -0.17
ATG4B-216ENST00000475195 OTOSQ8NHW6 89 aa13.99□□□□□ -0.17
ATG4B-216ENST00000475195 OTULINQ96BN8 352 aa13.99□□□□□ -0.17
ATG4B-216ENST00000475195 ZNF799Q96GE5 643 aa13.99□□□□□ -0.17
ATG4B-216ENST00000475195 C1orf159Q96HA4 380 aa13.99□□□□□ -0.17
ATG4B-216ENST00000475195 PLEKHA8Q96JA3 519 aa13.99□□□□□ -0.17
ATG4B-216ENST00000475195 PKP2Q99959 881 aa13.99□□□□□ -0.17
ATG4B-216ENST00000475195 TOR3AQ9H497 397 aa13.99□□□□□ -0.17
ATG4B-216ENST00000475195 MSL2Q9HCI7 577 aa13.99□□□□□ -0.17
ATG4B-216ENST00000475195 ZNF275Q9NSD4 429 aaPredicted RBP13.99□□□□□ -0.17
ATG4B-216ENST00000475195 DECR2Q9NUI1 292 aa13.99□□□□□ -0.17
ATG4B-216ENST00000475195 PTTG3PQ9NZH4 202 aa13.99□□□□□ -0.17
ATG4B-216ENST00000475195 ANK3Q12955 4377 aaKnown RBP13.98□□□□□ -0.17
ATG4B-216ENST00000475195 IGHV1-69-2A0A0G2JMI3 117 aa13.98□□□□□ -0.17
ATG4B-216ENST00000475195 IQCF6A8MYZ5 107 aa13.98□□□□□ -0.17
ATG4B-216ENST00000475195 ZNF878C9JN71 531 aa13.98□□□□□ -0.17
ATG4B-216ENST00000475195 LCATP04180 440 aa13.98□□□□□ -0.17
ATG4B-216ENST00000475195 IGHV4-31P0DP07 118 aa13.98□□□□□ -0.17
ATG4B-216ENST00000475195 GGTLC2Q14390 218 aa13.98□□□□□ -0.17
ATG4B-216ENST00000475195 GK2Q14410 553 aaPredicted RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms