RNA–Protein interactions for RNA: ENST00000474256.1

CDPF1-205, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 3

Gene CDPF1, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-205ENST00000474256 GCM1Q9NP62 436 aa13.3□□□□□ -0.28
CDPF1-205ENST00000474256 PNRC2Q9NPJ4 139 aaKnown RBP13.3□□□□□ -0.28
CDPF1-205ENST00000474256 ACTR3BQ9P1U1 418 aa13.3□□□□□ -0.28
CDPF1-205ENST00000474256 POLR3KQ9Y2Y1 108 aaPredicted RBP13.3□□□□□ -0.28
CDPF1-205ENST00000474256 LYVE1Q9Y5Y7 322 aa13.3□□□□□ -0.28
CDPF1-205ENST00000474256 A0A1B0GWJ7 208 aa13.29□□□□□ -0.28
CDPF1-205ENST00000474256 IQCF6A8MYZ5 107 aa13.29□□□□□ -0.28
CDPF1-205ENST00000474256 TMEM178BH3BS89 294 aa13.29□□□□□ -0.28
CDPF1-205ENST00000474256 BHLHE40O14503 412 aa13.29□□□□□ -0.28
CDPF1-205ENST00000474256 FSHBP01225 129 aa13.29□□□□□ -0.28
CDPF1-205ENST00000474256 ACSM4P0C7M7 580 aa13.29□□□□□ -0.28
CDPF1-205ENST00000474256 ADRA2CP18825 462 aa13.29□□□□□ -0.28
CDPF1-205ENST00000474256 MMP16P51512 607 aa13.29□□□□□ -0.28
CDPF1-205ENST00000474256 MNAT1P51948 309 aa13.29□□□□□ -0.28
CDPF1-205ENST00000474256 HILS1P60008 231 aa13.29□□□□□ -0.28
CDPF1-205ENST00000474256 MXRA7P84157 204 aa13.29□□□□□ -0.28
CDPF1-205ENST00000474256 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.29□□□□□ -0.28
CDPF1-205ENST00000474256 ECH1Q13011 328 aa13.29□□□□□ -0.28
CDPF1-205ENST00000474256 ZMYND11Q15326 602 aa13.29□□□□□ -0.28
CDPF1-205ENST00000474256 SLC35F1Q5T1Q4 408 aa13.29□□□□□ -0.28
CDPF1-205ENST00000474256 ZNF770Q6IQ21 691 aaPredicted RBP13.29□□□□□ -0.28
CDPF1-205ENST00000474256 RPL13AP3Q6NVV1 102 aa13.29□□□□□ -0.28
CDPF1-205ENST00000474256 KLHL36Q8N4N3 616 aa13.29□□□□□ -0.28
CDPF1-205ENST00000474256 LINC00471Q8N535 108 aa13.29□□□□□ -0.28
CDPF1-205ENST00000474256 ATG16L2Q8NAA4 619 aa13.29□□□□□ -0.28
CDPF1-205ENST00000474256 OR4C15Q8NGM1 316 aa13.29□□□□□ -0.28
CDPF1-205ENST00000474256 OR13G1Q8NGZ3 307 aa13.29□□□□□ -0.28
CDPF1-205ENST00000474256 NANPQ8TBE9 248 aa13.29□□□□□ -0.28
CDPF1-205ENST00000474256 MEGF10Q96KG7 1140 aa13.29□□□□□ -0.28
CDPF1-205ENST00000474256 PITX2Q99697 317 aa13.29□□□□□ -0.28
CDPF1-205ENST00000474256 SLC30A2Q9BRI3 323 aa13.29□□□□□ -0.28
CDPF1-205ENST00000474256 BTBD10Q9BSF8 475 aa13.29□□□□□ -0.28
CDPF1-205ENST00000474256 CDADC1Q9BWV3 514 aa13.29□□□□□ -0.28
CDPF1-205ENST00000474256 TRIM15Q9C019 465 aa13.29□□□□□ -0.28
CDPF1-205ENST00000474256 FN3KQ9H479 309 aa13.29□□□□□ -0.28
CDPF1-205ENST00000474256 EGLN3Q9H6Z9 239 aa13.29□□□□□ -0.28
CDPF1-205ENST00000474256 MRPL22Q9NWU5 206 aaKnown RBP13.29□□□□□ -0.28
CDPF1-205ENST00000474256 IL20Q9NYY1 176 aa13.29□□□□□ -0.28
CDPF1-205ENST00000474256 PCDHB10Q9UN67 800 aa13.29□□□□□ -0.28
CDPF1-205ENST00000474256 CDH10Q9Y6N8 788 aa13.29□□□□□ -0.28
CDPF1-205ENST00000474256 F5H0A9 414 aaPredicted RBP13.28□□□□□ -0.28
CDPF1-205ENST00000474256 H0YL77 283 aa13.28□□□□□ -0.28
CDPF1-205ENST00000474256 IFNL4K9M1U5 179 aa13.28□□□□□ -0.28
CDPF1-205ENST00000474256 TNFRSF11BO00300 401 aa13.28□□□□□ -0.28
CDPF1-205ENST00000474256 MLNRO43193 412 aa13.28□□□□□ -0.28
CDPF1-205ENST00000474256 ATP6V1B2P21281 511 aa13.28□□□□□ -0.28
CDPF1-205ENST00000474256 MDH2P40926 338 aaKnown RBP13.28□□□□□ -0.28
CDPF1-205ENST00000474256 SLC6A9P48067 706 aa13.28□□□□□ -0.28
CDPF1-205ENST00000474256 CLEC12AQ5QGZ9 265 aa13.28□□□□□ -0.28
CDPF1-205ENST00000474256 ZNF362Q5T0B9 420 aaPredicted RBP13.28□□□□□ -0.28
CDPF1-205ENST00000474256 CYP2R1Q6VVX0 501 aa13.28□□□□□ -0.28
CDPF1-205ENST00000474256 FITM2Q8N6M3 262 aa13.28□□□□□ -0.28
CDPF1-205ENST00000474256 DEFB108BQ8NET1 73 aa13.28□□□□□ -0.28
CDPF1-205ENST00000474256 OR10AD1Q8NGE0 317 aa13.28□□□□□ -0.28
CDPF1-205ENST00000474256 OR9Q2Q8NGE9 314 aa13.28□□□□□ -0.28
CDPF1-205ENST00000474256 OR2AJ1Q8NGZ0 328 aa13.28□□□□□ -0.28
CDPF1-205ENST00000474256 ATF6BQ99941 703 aa13.28□□□□□ -0.28
CDPF1-205ENST00000474256 PLA2G12AQ9BZM1 189 aa13.28□□□□□ -0.28
CDPF1-205ENST00000474256 MMP26Q9NRE1 261 aa13.28□□□□□ -0.28
CDPF1-205ENST00000474256 KCNG2Q9UJ96 466 aa13.28□□□□□ -0.28
CDPF1-205ENST00000474256 TANC2Q9HCD6 1990 aa13.27□□□□□ -0.28
CDPF1-205ENST00000474256 TCRBV5S2A0A599 114 aa13.27□□□□□ -0.29
CDPF1-205ENST00000474256 A8MXK9 166 aa13.27□□□□□ -0.29
CDPF1-205ENST00000474256 F5H5K5 113 aa13.27□□□□□ -0.29
CDPF1-205ENST00000474256 RGS9O75916 674 aaPredicted RBP13.27□□□□□ -0.29
CDPF1-205ENST00000474256 GASTP01350 101 aa13.27□□□□□ -0.29
CDPF1-205ENST00000474256 HLA-DQA2P01906 255 aa13.27□□□□□ -0.29
CDPF1-205ENST00000474256 SELEP16581 610 aa13.27□□□□□ -0.29
CDPF1-205ENST00000474256 SRP9P49458 86 aaKnown RBP13.27□□□□□ -0.29
CDPF1-205ENST00000474256 SEC61A1P61619 476 aaKnown RBP13.27□□□□□ -0.29
CDPF1-205ENST00000474256 TRAP1Q12931 704 aaKnown RBP13.27□□□□□ -0.29
CDPF1-205ENST00000474256 GK2Q14410 553 aaPredicted RBP13.27□□□□□ -0.29
CDPF1-205ENST00000474256 RASSF6Q6ZTQ3 369 aa13.27□□□□□ -0.29
CDPF1-205ENST00000474256 NAA40Q86UY6 237 aa13.27□□□□□ -0.29
CDPF1-205ENST00000474256 MUC20Q8N307 709 aaPredicted RBP13.27□□□□□ -0.29
CDPF1-205ENST00000474256 OR52L1Q8NGH7 329 aa13.27□□□□□ -0.29
CDPF1-205ENST00000474256 MAP6Q96JE9 813 aa13.27□□□□□ -0.29
CDPF1-205ENST00000474256 WDR76Q9H967 626 aa13.27□□□□□ -0.29
CDPF1-205ENST00000474256 B2RBV5 119 aa13.26□□□□□ -0.29
CDPF1-205ENST00000474256 TRAPPC2LH3BP13 241 aa13.26□□□□□ -0.29
CDPF1-205ENST00000474256 FSTL3O95633 263 aa13.26□□□□□ -0.29
CDPF1-205ENST00000474256 CPT2P23786 658 aa13.26□□□□□ -0.29
CDPF1-205ENST00000474256 ZNF154Q13106 437 aa13.26□□□□□ -0.29
CDPF1-205ENST00000474256 ZNF181Q2M3W8 571 aa13.26□□□□□ -0.29
CDPF1-205ENST00000474256 LCN8Q6JVE9 175 aa13.26□□□□□ -0.29
CDPF1-205ENST00000474256 ARHGAP24Q8N264 748 aa13.26□□□□□ -0.29
CDPF1-205ENST00000474256 CYB561A3Q8NBI2 242 aa13.26□□□□□ -0.29
CDPF1-205ENST00000474256 BHLHE23Q8NDY6 225 aa13.26□□□□□ -0.29
CDPF1-205ENST00000474256 OR8D4Q8NGM9 314 aa13.26□□□□□ -0.29
CDPF1-205ENST00000474256 OR10S1Q8NGN2 331 aa13.26□□□□□ -0.29
CDPF1-205ENST00000474256 ZNF420Q8TAQ5 688 aaPredicted RBP13.26□□□□□ -0.29
CDPF1-205ENST00000474256 FAM216AQ8WUB2 273 aa13.26□□□□□ -0.29
CDPF1-205ENST00000474256 ZNRF4Q8WWF5 429 aa13.26□□□□□ -0.29
CDPF1-205ENST00000474256 JMJD8Q96S16 334 aa13.26□□□□□ -0.29
CDPF1-205ENST00000474256 SUCNR1Q9BXA5 334 aa13.26□□□□□ -0.29
CDPF1-205ENST00000474256 HCAR1Q9BXC0 346 aa13.26□□□□□ -0.29
CDPF1-205ENST00000474256 MUC13Q9H3R2 512 aa13.26□□□□□ -0.29
CDPF1-205ENST00000474256 MAGIXQ9H6Y5 334 aa13.26□□□□□ -0.29
CDPF1-205ENST00000474256 TMEM165Q9HC07 324 aa13.26□□□□□ -0.29
CDPF1-205ENST00000474256 TMEM100Q9NV29 134 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms