RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 PCGF3Q3KNV8 242 aa4.6□□□□□ -1.67
TMEM39A-206ENST00000473684 SLC25A35Q3KQZ1 300 aa4.6□□□□□ -1.67
TMEM39A-206ENST00000473684 ZNF322Q6U7Q0 402 aaPredicted RBP4.6□□□□□ -1.67
TMEM39A-206ENST00000473684 ZNF836Q6ZNA1 936 aa4.6□□□□□ -1.67
TMEM39A-206ENST00000473684 SLC25A26Q70HW3 274 aa4.6□□□□□ -1.67
TMEM39A-206ENST00000473684 MTSS1LQ765P7 747 aa4.6□□□□□ -1.67
TMEM39A-206ENST00000473684 BCDIN3DQ7Z5W3 292 aaKnown RBP4.6□□□□□ -1.67
TMEM39A-206ENST00000473684 H1FOOQ8IZA3 346 aaPredicted RBP4.6□□□□□ -1.67
TMEM39A-206ENST00000473684 MAML2Q8IZL2 1156 aaPredicted RBP4.6□□□□□ -1.67
TMEM39A-206ENST00000473684 CMTM4Q8IZR5 234 aa4.6□□□□□ -1.67
TMEM39A-206ENST00000473684 OR13C4Q8NGS5 318 aa4.6□□□□□ -1.67
TMEM39A-206ENST00000473684 OR13C2Q8NGS9 318 aa4.6□□□□□ -1.67
TMEM39A-206ENST00000473684 HASPINQ8TF76 798 aa4.6□□□□□ -1.67
TMEM39A-206ENST00000473684 Q8WTZ3 238 aa4.6□□□□□ -1.67
TMEM39A-206ENST00000473684 TMEM18Q96B42 140 aa4.6□□□□□ -1.67
TMEM39A-206ENST00000473684 RPUSD4Q96CM3 377 aaKnown RBP4.6□□□□□ -1.67
TMEM39A-206ENST00000473684 MBD6Q96DN6 1003 aa4.6□□□□□ -1.67
TMEM39A-206ENST00000473684 LPAR4Q99677 370 aa4.6□□□□□ -1.67
TMEM39A-206ENST00000473684 AIF1LQ9BQI0 150 aa4.6□□□□□ -1.67
TMEM39A-206ENST00000473684 ANGPTL4Q9BY76 406 aa4.6□□□□□ -1.67
TMEM39A-206ENST00000473684 RAB33BQ9H082 229 aa4.6□□□□□ -1.67
TMEM39A-206ENST00000473684 AGO4Q9HCK5 861 aaKnown RBP4.6□□□□□ -1.67
TMEM39A-206ENST00000473684 KCNJ16Q9NPI9 418 aa4.6□□□□□ -1.67
TMEM39A-206ENST00000473684 CYTL1Q9NRR1 136 aa4.6□□□□□ -1.67
TMEM39A-206ENST00000473684 SLC2A8Q9NY64 477 aa4.6□□□□□ -1.67
TMEM39A-206ENST00000473684 NUDT4Q9NZJ9 180 aa4.6□□□□□ -1.67
TMEM39A-206ENST00000473684 SMPXQ9UHP9 88 aa4.6□□□□□ -1.67
TMEM39A-206ENST00000473684 CLEC18AA5D8T8 446 aa4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 C9orf118A6NHY6 69 aa4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 MANBAO00462 879 aa4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 ZNF208O43345 1280 aa4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 DOK2O60496 412 aa4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 SCGNO76038 276 aa4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 ONECUT2O95948 504 aa4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 GBAP04062 536 aa4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 LCATP04180 440 aa4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 CSF1P09603 554 aa4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 RAB40ALP0C0E4 278 aa4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 ELFN1P0C7U0 828 aa4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 ATF1P18846 271 aa4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 MAKP20794 623 aa4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 FCARP24071 287 aa4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 CHATP28329 748 aa4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 OR10J1P30954 320 aa4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 S100A7P31151 101 aa4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 ALDH3B1P43353 468 aa4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 PTH2RP49190 550 aa4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 FLT3LGP49771 235 aa4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 POLR2HP52434 150 aaKnown RBP4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 CLDN18P56856 261 aa4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 SMIM11AP58511 58 aa4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 TAS2R43P59537 309 aa4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 CDK5Q00535 292 aa4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 TIAL1Q01085 375 aaKnown RBP eCLIP4.59□□□□□ -1.673e-7■■■■□ 24.8
TMEM39A-206ENST00000473684 MESP2Q0VG99 397 aa4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 OCIAD2Q56VL3 154 aa4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 MRNIPQ6NTE8 343 aa4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 DNM1P46Q6ZS02 220 aa4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 TMPPEQ6ZT21 453 aa4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 CATSPERDQ86XM0 798 aa4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 LINC00471Q8N535 108 aa4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 FAM89BQ8N5H3 189 aa4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 ACOT4Q8N9L9 421 aa4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 RNF149Q8NC42 400 aa4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 CLEC18CQ8NCF0 446 aa4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 OR51F2Q8NH61 342 aa4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 ARRDC2Q8TBH0 407 aa4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 SFXN5Q8TD22 340 aa4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 ABHD5Q8WTS1 349 aa4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 CASTOR1Q8WTX7 329 aa4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 PPP1R1CQ8WVI7 109 aa4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 HMGB4Q8WW32 186 aa4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 SPRYD4Q8WW59 207 aaPredicted RBP4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 RAB40AQ8WXH6 277 aa4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 NDRG1Q92597 394 aaKnown RBP4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 FRZBQ92765 325 aa4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 SMARCD2Q92925 531 aa4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 SPACA9Q96E40 222 aaPredicted RBP4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 IMP4Q96G21 291 aaKnown RBP4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 C16orf58Q96GQ5 468 aa4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 GPHA2Q96T91 129 aa4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 C20orf24Q9BUV8 137 aa4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 SLC35B3Q9H1N7 401 aa4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 TSPAN16Q9UKR8 245 aa4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 JAG2Q9Y219 1238 aa4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 FARSAQ9Y285 508 aaKnown RBP4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 EXOGQ9Y2C4 368 aaKnown RBP4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 ZFP37Q9Y6Q3 630 aaPredicted RBP4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 SIP14410 1827 aa4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 IGHV2-70DA0A0C4DH43 119 aa4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 A0A1B0GV72 72 aa4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 C5orf51A6NDU8 294 aa4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 PEX12O00623 359 aa4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 WDR1O75083 606 aa4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 SOX14O95416 240 aa4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 MBPP02686 304 aaPredicted RBP4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 IFNW1P05000 195 aa4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 DCNP07585 359 aaKnown RBP4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 OR4A8P0C604 315 aa4.59□□□□□ -1.67
TMEM39A-206ENST00000473684 OR12D1P0DN82 309 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms