RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 OR6K6Q8NGW6 343 aa13.25□□□□□ -0.29
MRPL55-226ENST00000473066 SPTSSAQ969W0 71 aa13.25□□□□□ -0.29
MRPL55-226ENST00000473066 HAVCR1Q96D42 359 aa13.25□□□□□ -0.29
MRPL55-226ENST00000473066 FEVQ99581 238 aa13.25□□□□□ -0.29
MRPL55-226ENST00000473066 TREM2Q9NZC2 230 aa13.25□□□□□ -0.29
MRPL55-226ENST00000473066 CYB5R1Q9UHQ9 305 aa13.25□□□□□ -0.29
MRPL55-226ENST00000473066 WIPI2Q9Y4P8 454 aa13.25□□□□□ -0.29
MRPL55-226ENST00000473066 TVP23AA6NH52 213 aa13.24□□□□□ -0.29
MRPL55-226ENST00000473066 LCATP04180 440 aa13.24□□□□□ -0.29
MRPL55-226ENST00000473066 SPARCP09486 303 aa13.24□□□□□ -0.29
MRPL55-226ENST00000473066 PAICSP22234 425 aaKnown RBP13.24□□□□□ -0.29
MRPL55-226ENST00000473066 SRP14P37108 136 aaKnown RBP13.24□□□□□ -0.29
MRPL55-226ENST00000473066 SLC6A9P48067 706 aa13.24□□□□□ -0.29
MRPL55-226ENST00000473066 RASSF2P50749 326 aa13.24□□□□□ -0.29
MRPL55-226ENST00000473066 DBPQ10586 325 aaPredicted RBP13.24□□□□□ -0.29
MRPL55-226ENST00000473066 CDK5R2Q13319 367 aa13.24□□□□□ -0.29
MRPL55-226ENST00000473066 FBXW12Q6X9E4 464 aa13.24□□□□□ -0.29
MRPL55-226ENST00000473066 OR5AS1Q8N127 324 aa13.24□□□□□ -0.29
MRPL55-226ENST00000473066 OR51L1Q8NGJ5 315 aa13.24□□□□□ -0.29
MRPL55-226ENST00000473066 OR4Q3Q8NH05 313 aa13.24□□□□□ -0.29
MRPL55-226ENST00000473066 OR51F2Q8NH61 342 aa13.24□□□□□ -0.29
MRPL55-226ENST00000473066 OTULINQ96BN8 352 aa13.24□□□□□ -0.29
MRPL55-226ENST00000473066 C1orf159Q96HA4 380 aa13.24□□□□□ -0.29
MRPL55-226ENST00000473066 GAL3ST1Q99999 423 aa13.24□□□□□ -0.29
MRPL55-226ENST00000473066 NIPSNAP1Q9BPW8 284 aa13.24□□□□□ -0.29
MRPL55-226ENST00000473066 LPAR2Q9HBW0 351 aa13.24□□□□□ -0.29
MRPL55-226ENST00000473066 MRPL22Q9NWU5 206 aaKnown RBP13.24□□□□□ -0.29
MRPL55-226ENST00000473066 PDP1Q9P0J1 537 aaPredicted RBP13.24□□□□□ -0.29
MRPL55-226ENST00000473066 TMEFF2Q9UIK5 374 aaPredicted RBP13.24□□□□□ -0.29
MRPL55-226ENST00000473066 CACNG2Q9Y698 323 aa13.24□□□□□ -0.29
MRPL55-226ENST00000473066 COMMD3-BMI1R4GMX3 469 aa13.24□□□□□ -0.29
MRPL55-226ENST00000473066 WNK2Q9Y3S1 2297 aa13.24□□□□□ -0.29
MRPL55-226ENST00000473066 M0R135 149 aa13.23□□□□□ -0.29
MRPL55-226ENST00000473066 FKBP6O75344 327 aa13.23□□□□□ -0.29
MRPL55-226ENST00000473066 MSMBP08118 114 aa13.23□□□□□ -0.29
MRPL55-226ENST00000473066 ACSM4P0C7M7 580 aa13.23□□□□□ -0.29
MRPL55-226ENST00000473066 ANPEPP15144 967 aa13.23□□□□□ -0.29
MRPL55-226ENST00000473066 SELEP16581 610 aa13.23□□□□□ -0.29
MRPL55-226ENST00000473066 SPI1P17947 270 aa13.23□□□□□ -0.29
MRPL55-226ENST00000473066 POU1F1P28069 291 aa13.23□□□□□ -0.29
MRPL55-226ENST00000473066 GRK5P34947 590 aa13.23□□□□□ -0.29
MRPL55-226ENST00000473066 GGT2P36268 569 aa13.23□□□□□ -0.29
MRPL55-226ENST00000473066 ENTPD1P49961 510 aa13.23□□□□□ -0.29
MRPL55-226ENST00000473066 SLC25A1P53007 311 aa13.23□□□□□ -0.29
MRPL55-226ENST00000473066 CBX1P83916 185 aa13.23□□□□□ -0.29
MRPL55-226ENST00000473066 TAF13Q15543 124 aa13.23□□□□□ -0.29
MRPL55-226ENST00000473066 OR2T2Q6IF00 324 aa13.23□□□□□ -0.29
MRPL55-226ENST00000473066 SLC27A4Q6P1M0 643 aa13.23□□□□□ -0.29
MRPL55-226ENST00000473066 SHQ1Q6PI26 577 aaKnown RBP13.23□□□□□ -0.29
MRPL55-226ENST00000473066 CD300LDQ6UXZ3 194 aa13.23□□□□□ -0.29
MRPL55-226ENST00000473066 ATG16L2Q8NAA4 619 aa13.23□□□□□ -0.29
MRPL55-226ENST00000473066 SLC7A6OSQ96CW6 309 aaPredicted RBP13.23□□□□□ -0.29
MRPL55-226ENST00000473066 ZNF799Q96GE5 643 aa13.23□□□□□ -0.29
MRPL55-226ENST00000473066 ZNF582Q96NG8 517 aaPredicted RBP13.23□□□□□ -0.29
MRPL55-226ENST00000473066 COPS4Q9BT78 406 aa13.23□□□□□ -0.29
MRPL55-226ENST00000473066 RBM4Q9BWF3 364 aaKnown RBP13.23□□□□□ -0.29
MRPL55-226ENST00000473066 TEX12Q9BXU0 123 aa13.23□□□□□ -0.29
MRPL55-226ENST00000473066 ZNF665Q9H7R5 613 aa13.23□□□□□ -0.29
MRPL55-226ENST00000473066 CMC2Q9NRP2 79 aa13.23□□□□□ -0.29
MRPL55-226ENST00000473066 KIF17Q9P2E2 1029 aa13.23□□□□□ -0.29
MRPL55-226ENST00000473066 POMPQ9Y244 141 aa13.23□□□□□ -0.29
MRPL55-226ENST00000473066 ANK3Q12955 4377 aaKnown RBP13.22□□□□□ -0.29
MRPL55-226ENST00000473066 GYPBP06028 91 aa13.22□□□□□ -0.29
MRPL55-226ENST00000473066 HLXQ14774 488 aaPredicted RBP13.22□□□□□ -0.29
MRPL55-226ENST00000473066 MRPL21Q7Z2W9 205 aaKnown RBP13.22□□□□□ -0.29
MRPL55-226ENST00000473066 BHLHE23Q8NDY6 225 aa13.22□□□□□ -0.29
MRPL55-226ENST00000473066 OR8G5Q8NG78 346 aa13.22□□□□□ -0.29
MRPL55-226ENST00000473066 OR13G1Q8NGZ3 307 aa13.22□□□□□ -0.29
MRPL55-226ENST00000473066 ITLN1Q8WWA0 313 aa13.22□□□□□ -0.29
MRPL55-226ENST00000473066 TMEM186Q96B77 213 aa13.22□□□□□ -0.29
MRPL55-226ENST00000473066 PLEKHA8Q96JA3 519 aa13.22□□□□□ -0.29
MRPL55-226ENST00000473066 C1QTNF5Q9BXJ0 243 aa13.22□□□□□ -0.29
MRPL55-226ENST00000473066 DNAJB9Q9UBS3 223 aa13.22□□□□□ -0.29
MRPL55-226ENST00000473066 IL19Q9UHD0 177 aa13.22□□□□□ -0.29
MRPL55-226ENST00000473066 TRAV20A0A0B4J274 112 aa13.21□□□□□ -0.29
MRPL55-226ENST00000473066 TCRBV3S1A0A5B6 114 aa13.21□□□□□ -0.29
MRPL55-226ENST00000473066 FAM157AC9JC47 383 aa13.21□□□□□ -0.29
MRPL55-226ENST00000473066 ZNF878C9JN71 531 aa13.21□□□□□ -0.29
MRPL55-226ENST00000473066 WNT9BO14905 357 aa13.21□□□□□ -0.29
MRPL55-226ENST00000473066 DEAF1O75398 565 aaPredicted RBP13.21□□□□□ -0.29
MRPL55-226ENST00000473066 ATP5HO75947 161 aa13.21□□□□□ -0.29
MRPL55-226ENST00000473066 ANXA8P13928 327 aa13.21□□□□□ -0.29
MRPL55-226ENST00000473066 RPS27P42677 84 aaKnown RBP13.21□□□□□ -0.29
MRPL55-226ENST00000473066 SRP9P49458 86 aaKnown RBP13.21□□□□□ -0.29
MRPL55-226ENST00000473066 ERFP50548 548 aa13.21□□□□□ -0.29
MRPL55-226ENST00000473066 LMO4P61968 165 aa13.21□□□□□ -0.29
MRPL55-226ENST00000473066 ACSM5Q6NUN0 579 aa13.21□□□□□ -0.29
MRPL55-226ENST00000473066 LYPD4Q6UWN0 246 aa13.21□□□□□ -0.29
MRPL55-226ENST00000473066 Q6ZR03 302 aa13.21□□□□□ -0.29
MRPL55-226ENST00000473066 DCXRQ7Z4W1 244 aa13.21□□□□□ -0.29
MRPL55-226ENST00000473066 IQCF1Q8N6M8 205 aa13.21□□□□□ -0.29
MRPL55-226ENST00000473066 OR6N2Q8NGY6 317 aa13.21□□□□□ -0.29
MRPL55-226ENST00000473066 ST7LQ8TDW4 575 aa13.21□□□□□ -0.29
MRPL55-226ENST00000473066 MAP6Q96JE9 813 aa13.21□□□□□ -0.29
MRPL55-226ENST00000473066 OR2V2Q96R30 315 aa13.21□□□□□ -0.29
MRPL55-226ENST00000473066 DDOQ99489 341 aa13.21□□□□□ -0.29
MRPL55-226ENST00000473066 WDR76Q9H967 626 aa13.21□□□□□ -0.29
MRPL55-226ENST00000473066 PNRC2Q9NPJ4 139 aaKnown RBP13.21□□□□□ -0.29
MRPL55-226ENST00000473066 CENPMQ9NSP4 180 aa13.21□□□□□ -0.29
MRPL55-226ENST00000473066 TMEM106BQ9NUM4 274 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms