RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 SHC1P29353 583 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 SUB1P53999 127 aaKnown RBP eCLIP2.07□□□□□ -2.08
XRN1-210ENST00000472697 AQP5P55064 265 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 CLDN12P56749 244 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 FBXW4P57775 412 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 OR10A3P58181 314 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 RND3P61587 244 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 NUTF2P61970 127 aaKnown RBP2.07□□□□□ -2.08
XRN1-210ENST00000472697 CACNG7P62955 275 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 MXD1Q05195 221 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 ZBTB6Q15916 424 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 PRSS8Q16651 343 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 EIPR1Q53HC9 387 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 SLC35E4Q6ICL7 350 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 ARCQ7LC44 396 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 FAM220AQ7Z4H9 259 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 FAM19A1Q7Z5A9 133 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 C15orf54Q8N8G6 183 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 PHOSPHO2Q8TCD6 241 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 WBP1Q96G27 269 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 ADTRPQ96IZ2 230 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 TMEM175Q9BSA9 504 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 PARLQ9H300 379 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 KIR3DX1Q9H7L2 352 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 MOB1AQ9H8S9 216 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 TRMT112Q9UI30 125 aaKnown RBP2.07□□□□□ -2.08
XRN1-210ENST00000472697 HYOU1Q9Y4L1 999 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 MRPS18BQ9Y676 258 aaKnown RBP2.07□□□□□ -2.08
XRN1-210ENST00000472697 TANC1Q9C0D5 1861 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 DOCK8Q8NF50 2099 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 FAM166BA8MTA8 275 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 VGLL3A8MV65 326 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 NUPL2O15504 423 aaKnown RBP2.06□□□□□ -2.08
XRN1-210ENST00000472697 AQP9O43315 295 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 ERLIN2O94905 339 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 UTS2O95399 124 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 KLK3P07288 261 aaPredicted RBP2.06□□□□□ -2.08
XRN1-210ENST00000472697 PGA5P0DJD9 388 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 FUT3P21217 361 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 FASP25445 335 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 GRPRP30550 384 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 SPRP35270 261 aaPredicted RBP2.06□□□□□ -2.08
XRN1-210ENST00000472697 GCKP35557 465 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 KIR2DS4P43632 304 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 GALR1P47211 349 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 CLDN18P56856 261 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 GSCP56915 257 aaPredicted RBP2.06□□□□□ -2.08
XRN1-210ENST00000472697 ZNF763Q0D2J5 394 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 LY6DQ14210 128 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 TAL2Q16559 108 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 KHDRBS2Q5VWX1 349 aaKnown RBP2.06□□□□□ -2.08
XRN1-210ENST00000472697 ZNF620Q6ZNG0 422 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 STXBP4Q6ZWJ1 553 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 UTS2BQ765I0 119 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 ZNF571Q7Z3V5 609 aaPredicted RBP2.06□□□□□ -2.08
XRN1-210ENST00000472697 HDDC2Q7Z4H3 204 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 PRIMA1Q86XR5 153 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 BLIDQ8IZY5 108 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 SVOPLQ8N434 492 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 C2orf73Q8N5S3 287 aaPredicted RBP2.06□□□□□ -2.08
XRN1-210ENST00000472697 NUP37Q8NFH4 326 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 OR2L5Q8NG80 312 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 OR4K2Q8NGD2 314 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 OR8J2Q8NGG1 315 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 CCDC26Q8TAB7 109 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 FLVCR1-AS1Q8TAF5 88 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 ACER1Q8TDN7 264 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 GTSF1Q8WW33 167 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 TAF15Q92804 592 aaKnown RBP eCLIP2.06□□□□□ -2.08
XRN1-210ENST00000472697 PAGE5Q96GU1 130 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 ZNF578Q96N58 590 aaPredicted RBP2.06□□□□□ -2.08
XRN1-210ENST00000472697 PLEKHF1Q96S99 279 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 RAB34Q9BZG1 259 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 SLC19A3Q9BZV2 496 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 C6orf106Q9H6K1 298 aaPredicted RBP2.06□□□□□ -2.08
XRN1-210ENST00000472697 ZNF556Q9HAH1 456 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 PATZ1Q9HBE1 687 aaKnown RBP2.06□□□□□ -2.08
XRN1-210ENST00000472697 TREM2Q9NZC2 230 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 WWOXQ9NZC7 414 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 UXTQ9UBK9 157 aaPredicted RBP2.06□□□□□ -2.08
XRN1-210ENST00000472697 DLG5Q8TDM6 1919 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 MYH13Q9UKX3 1938 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 CDK5RAP2Q96SN8 1893 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 FANCIQ9NVI1 1328 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 USP27XA6NNY8 438 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 MPTX1A8MV57 137 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 RSPH10B2B2RC85 870 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 E9PAM4 449 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 MKRN2OSH3BPM6 223 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 SHOX2O60902 331 aaPredicted RBP2.06□□□□□ -2.08
XRN1-210ENST00000472697 RENP00797 406 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 RSPH10BP0C881 870 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 CT45A10P0DMU9 189 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 IGFBP5P24593 272 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 VDAC2P45880 294 aaPredicted RBP2.06□□□□□ -2.08
XRN1-210ENST00000472697 FCHO2Q0JRZ9 810 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 GNA13Q14344 377 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 MESDQ14696 234 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 PSMD5Q16401 504 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 CNPY1Q3B7I2 92 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms