RNA–Protein interactions for RNA: ENST00000472441.1

TM4SF1-202, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2 BASIC

Gene TM4SF1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-202ENST00000472441 SRSF10O75494 262 aaKnown RBP4.31□□□□□ -1.72
TM4SF1-202ENST00000472441 TTRP02766 147 aa4.31□□□□□ -1.72
TM4SF1-202ENST00000472441 SERPINA7P05543 415 aa4.31□□□□□ -1.72
TM4SF1-202ENST00000472441 HLA-DMAP28067 261 aa4.31□□□□□ -1.72
TM4SF1-202ENST00000472441 HTR2CP28335 458 aa4.31□□□□□ -1.72
TM4SF1-202ENST00000472441 DCTDP32321 178 aa4.31□□□□□ -1.72
TM4SF1-202ENST00000472441 CARD18P57730 90 aa4.31□□□□□ -1.72
TM4SF1-202ENST00000472441 RAC1P63000 192 aa4.31□□□□□ -1.72
TM4SF1-202ENST00000472441 CSNK2A1P68400 391 aaPredicted RBP4.31□□□□□ -1.72
TM4SF1-202ENST00000472441 GUCA2AQ02747 115 aa4.31□□□□□ -1.72
TM4SF1-202ENST00000472441 SRYQ05066 204 aa4.31□□□□□ -1.72
TM4SF1-202ENST00000472441 PCK2Q16822 640 aa4.31□□□□□ -1.72
TM4SF1-202ENST00000472441 RSPO4Q2I0M5 234 aaPredicted RBP4.31□□□□□ -1.72
TM4SF1-202ENST00000472441 TMEM255AQ5JRV8 349 aa4.31□□□□□ -1.72
TM4SF1-202ENST00000472441 HES3Q5TGS1 186 aa4.31□□□□□ -1.72
TM4SF1-202ENST00000472441 HDDC2Q7Z4H3 204 aa4.31□□□□□ -1.72
TM4SF1-202ENST00000472441 ABHD12BQ7Z5M8 362 aaPredicted RBP4.31□□□□□ -1.72
TM4SF1-202ENST00000472441 NAA40Q86UY6 237 aa4.31□□□□□ -1.72
TM4SF1-202ENST00000472441 IL22RA1Q8N6P7 574 aa4.31□□□□□ -1.72
TM4SF1-202ENST00000472441 ADPRHL1Q8NDY3 354 aa4.31□□□□□ -1.72
TM4SF1-202ENST00000472441 OR8S1Q8NH09 359 aa4.31□□□□□ -1.72
TM4SF1-202ENST00000472441 LOXL4Q96JB6 756 aa4.31□□□□□ -1.72
TM4SF1-202ENST00000472441 RNF170Q96K19 258 aa4.31□□□□□ -1.72
TM4SF1-202ENST00000472441 CMTM3Q96MX0 182 aa4.31□□□□□ -1.72
TM4SF1-202ENST00000472441 SOX7Q9BT81 388 aa4.31□□□□□ -1.72
TM4SF1-202ENST00000472441 MRI1Q9BV20 369 aa4.31□□□□□ -1.72
TM4SF1-202ENST00000472441 ZNF416Q9BWM5 594 aa4.31□□□□□ -1.72
TM4SF1-202ENST00000472441 B3GNT4Q9C0J1 378 aa4.31□□□□□ -1.72
TM4SF1-202ENST00000472441 OR10A4Q9H209 315 aa4.31□□□□□ -1.72
TM4SF1-202ENST00000472441 HRASLSQ9HDD0 168 aa4.31□□□□□ -1.72
TM4SF1-202ENST00000472441 SH2D2AQ9NP31 389 aa4.31□□□□□ -1.72
TM4SF1-202ENST00000472441 TMEM9BQ9NQ34 198 aa4.31□□□□□ -1.72
TM4SF1-202ENST00000472441 FAM206AQ9NX38 181 aa4.31□□□□□ -1.72
TM4SF1-202ENST00000472441 IL17BQ9UHF5 180 aa4.31□□□□□ -1.72
TM4SF1-202ENST00000472441 ZNF222Q9UK12 451 aa4.31□□□□□ -1.72
TM4SF1-202ENST00000472441 SLC5A6Q9Y289 635 aa4.31□□□□□ -1.72
TM4SF1-202ENST00000472441 ETV7Q9Y603 341 aa4.31□□□□□ -1.72
TM4SF1-202ENST00000472441 ACACBO00763 2458 aa4.31□□□□□ -1.72
TM4SF1-202ENST00000472441 MYO7BQ6PIF6 2116 aa4.31□□□□□ -1.72
TM4SF1-202ENST00000472441 MYO18BQ8IUG5 2567 aa4.31□□□□□ -1.72
TM4SF1-202ENST00000472441 CCDC187A0A096LP49 1063 aa4.3□□□□□ -1.72
TM4SF1-202ENST00000472441 TMEM272A0A1B0GTI8 110 aa4.3□□□□□ -1.72
TM4SF1-202ENST00000472441 A0A1B0GVI7 797 aa4.3□□□□□ -1.72
TM4SF1-202ENST00000472441 PINLYPA6NC86 204 aa4.3□□□□□ -1.72
TM4SF1-202ENST00000472441 ZNF878C9JN71 531 aa4.3□□□□□ -1.72
TM4SF1-202ENST00000472441 SLC17A2O00624 439 aa4.3□□□□□ -1.72
TM4SF1-202ENST00000472441 CTDSPLO15194 276 aa4.3□□□□□ -1.72
TM4SF1-202ENST00000472441 GSTZ1O43708 216 aaPredicted RBP4.3□□□□□ -1.72
TM4SF1-202ENST00000472441 CTAG2O75638 210 aa4.3□□□□□ -1.72
TM4SF1-202ENST00000472441 RBBP9O75884 186 aa4.3□□□□□ -1.72
TM4SF1-202ENST00000472441 H2AFB2P0C5Z0 115 aa4.3□□□□□ -1.72
TM4SF1-202ENST00000472441 UBCP0CG48 685 aaKnown RBP4.3□□□□□ -1.72
TM4SF1-202ENST00000472441 ABOP16442 354 aa4.3□□□□□ -1.72
TM4SF1-202ENST00000472441 ACHEP22303 614 aa4.3□□□□□ -1.72
TM4SF1-202ENST00000472441 RCVRNP35243 200 aa4.3□□□□□ -1.72
TM4SF1-202ENST00000472441 CD96P40200 585 aa4.3□□□□□ -1.72
TM4SF1-202ENST00000472441 SLC6A9P48067 706 aa4.3□□□□□ -1.72
TM4SF1-202ENST00000472441 MMP16P51512 607 aa4.3□□□□□ -1.72
TM4SF1-202ENST00000472441 ZNF121P58317 390 aaPredicted RBP4.3□□□□□ -1.72
TM4SF1-202ENST00000472441 RRAS2P62070 204 aaPredicted RBP4.3□□□□□ -1.72
TM4SF1-202ENST00000472441 H3F3AP84243 136 aa4.3□□□□□ -1.72
TM4SF1-202ENST00000472441 KLF9Q13886 244 aaPredicted RBP4.3□□□□□ -1.72
TM4SF1-202ENST00000472441 SF3B4Q15427 424 aaKnown RBP eCLIP4.3□□□□□ -1.727e-7■□□□□ 10.8
TM4SF1-202ENST00000472441 ABHD17BQ5VST6 288 aa4.3□□□□□ -1.72
TM4SF1-202ENST00000472441 HACD4Q5VWC8 232 aa4.3□□□□□ -1.72
TM4SF1-202ENST00000472441 TMEM81Q6P7N7 255 aa4.3□□□□□ -1.72
TM4SF1-202ENST00000472441 DEGS2Q6QHC5 323 aa4.3□□□□□ -1.72
TM4SF1-202ENST00000472441 FAM57BQ71RH2 274 aa4.3□□□□□ -1.72
TM4SF1-202ENST00000472441 OR9K2Q8NGE7 335 aa4.3□□□□□ -1.72
TM4SF1-202ENST00000472441 OR13C9Q8NGT0 318 aa4.3□□□□□ -1.72
TM4SF1-202ENST00000472441 PSMF1Q92530 271 aa4.3□□□□□ -1.72
TM4SF1-202ENST00000472441 AKAP1Q92667 903 aaKnown RBP eCLIP4.3□□□□□ -1.72
TM4SF1-202ENST00000472441 THRSPQ92748 146 aa4.3□□□□□ -1.72
TM4SF1-202ENST00000472441 FAM46BQ96A09 425 aa4.3□□□□□ -1.72
TM4SF1-202ENST00000472441 ZNF837Q96EG3 531 aaPredicted RBP4.3□□□□□ -1.72
TM4SF1-202ENST00000472441 ADAT3Q96EY9 351 aaPredicted RBP4.3□□□□□ -1.72
TM4SF1-202ENST00000472441 TMEM41AQ96HV5 264 aa4.3□□□□□ -1.72
TM4SF1-202ENST00000472441 SIGLEC12Q96PQ1 595 aa4.3□□□□□ -1.72
TM4SF1-202ENST00000472441 DDA1Q9BW61 102 aa4.3□□□□□ -1.72
TM4SF1-202ENST00000472441 HES7Q9BYE0 225 aa4.3□□□□□ -1.72
TM4SF1-202ENST00000472441 MED28Q9H204 178 aa4.3□□□□□ -1.72
TM4SF1-202ENST00000472441 ZNF275Q9NSD4 429 aaPredicted RBP4.3□□□□□ -1.72
TM4SF1-202ENST00000472441 PAQR5Q9NXK6 330 aaPredicted RBP4.3□□□□□ -1.72
TM4SF1-202ENST00000472441 ING3Q9NXR8 418 aa4.3□□□□□ -1.72
TM4SF1-202ENST00000472441 NUBP2Q9Y5Y2 271 aa4.3□□□□□ -1.72
TM4SF1-202ENST00000472441 VPS13CQ709C8 3753 aa4.3□□□□□ -1.72
TM4SF1-202ENST00000472441 LOC100289279A0A1B0GTE1 492 aa4.3□□□□□ -1.72
TM4SF1-202ENST00000472441 OR5H15A6NDH6 313 aa4.3□□□□□ -1.72
TM4SF1-202ENST00000472441 ACOT7O00154 380 aa4.3□□□□□ -1.72
TM4SF1-202ENST00000472441 XRCC3O43542 346 aa4.3□□□□□ -1.72
TM4SF1-202ENST00000472441 GLSO94925 669 aaPredicted RBP4.3□□□□□ -1.72
TM4SF1-202ENST00000472441 ZNF20P17024 532 aa4.3□□□□□ -1.72
TM4SF1-202ENST00000472441 ANOS1P23352 680 aa4.3□□□□□ -1.72
TM4SF1-202ENST00000472441 SRD5A2P31213 254 aa4.3□□□□□ -1.72
TM4SF1-202ENST00000472441 MNDAP41218 407 aa4.3□□□□□ -1.72
TM4SF1-202ENST00000472441 CX3CR1P49238 355 aa4.3□□□□□ -1.72
TM4SF1-202ENST00000472441 SUCLG1P53597 346 aaKnown RBP4.3□□□□□ -1.72
TM4SF1-202ENST00000472441 CHAF1BQ13112 559 aa4.3□□□□□ -1.72
TM4SF1-202ENST00000472441 FCN2Q15485 313 aa4.3□□□□□ -1.72
TM4SF1-202ENST00000472441 PCGF3Q3KNV8 242 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms