RNA–Protein interactions for RNA: ENST00000472348.1

PCOLCE-205, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 960 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-205ENST00000472348 COL8A1P27658 744 aa13.9□□□□□ -0.18
PCOLCE-205ENST00000472348 APEX1P27695 318 aaKnown RBP13.9□□□□□ -0.18
PCOLCE-205ENST00000472348 HSD11B1P28845 292 aa13.9□□□□□ -0.18
PCOLCE-205ENST00000472348 RAD52P43351 418 aa13.9□□□□□ -0.18
PCOLCE-205ENST00000472348 TGM4P49221 684 aa13.9□□□□□ -0.18
PCOLCE-205ENST00000472348 TAF13Q15543 124 aa13.9□□□□□ -0.18
PCOLCE-205ENST00000472348 TBCEQ15813 527 aaPredicted RBP13.9□□□□□ -0.18
PCOLCE-205ENST00000472348 ZNF544Q6NX49 715 aa13.9□□□□□ -0.18
PCOLCE-205ENST00000472348 FAM220AQ7Z4H9 259 aa13.9□□□□□ -0.18
PCOLCE-205ENST00000472348 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.9□□□□□ -0.18
PCOLCE-205ENST00000472348 KLHL36Q8N4N3 616 aa13.9□□□□□ -0.18
PCOLCE-205ENST00000472348 SVOPQ8N4V2 548 aa13.9□□□□□ -0.18
PCOLCE-205ENST00000472348 NANOGP1Q8N7R0 232 aa13.9□□□□□ -0.18
PCOLCE-205ENST00000472348 ZNF485Q8NCK3 441 aa13.9□□□□□ -0.18
PCOLCE-205ENST00000472348 APOBEC3DQ96AK3 386 aaPredicted RBP13.9□□□□□ -0.18
PCOLCE-205ENST00000472348 ZNF799Q96GE5 643 aa13.9□□□□□ -0.18
PCOLCE-205ENST00000472348 DOK1Q99704 481 aa13.9□□□□□ -0.18
PCOLCE-205ENST00000472348 KCNS3Q9BQ31 491 aa13.9□□□□□ -0.18
PCOLCE-205ENST00000472348 RGCCQ9H4X1 137 aa13.9□□□□□ -0.18
PCOLCE-205ENST00000472348 OPA3Q9H6K4 179 aa13.9□□□□□ -0.18
PCOLCE-205ENST00000472348 CDH20Q9HBT6 801 aa13.9□□□□□ -0.18
PCOLCE-205ENST00000472348 ISYNA1Q9NPH2 558 aa13.9□□□□□ -0.18
PCOLCE-205ENST00000472348 CENPMQ9NSP4 180 aa13.9□□□□□ -0.18
PCOLCE-205ENST00000472348 PAK1IP1Q9NWT1 392 aaPredicted RBP13.9□□□□□ -0.18
PCOLCE-205ENST00000472348 EIF3KQ9UBQ5 218 aaKnown RBP13.9□□□□□ -0.18
PCOLCE-205ENST00000472348 MRM2Q9UI43 246 aaKnown RBP13.9□□□□□ -0.18
PCOLCE-205ENST00000472348 LRP12Q9Y561 859 aa13.9□□□□□ -0.18
PCOLCE-205ENST00000472348 RTTNQ86VV8 2226 aa13.89□□□□□ -0.19
PCOLCE-205ENST00000472348 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.89□□□□□ -0.19
PCOLCE-205ENST00000472348 M0R1B8 84 aa13.89□□□□□ -0.19
PCOLCE-205ENST00000472348 SRSF10O75494 262 aaKnown RBP13.89□□□□□ -0.19
PCOLCE-205ENST00000472348 MT-ND5P03915 603 aa13.89□□□□□ -0.19
PCOLCE-205ENST00000472348 CD3EP07766 207 aa13.89□□□□□ -0.19
PCOLCE-205ENST00000472348 LOXP28300 417 aaPredicted RBP13.89□□□□□ -0.19
PCOLCE-205ENST00000472348 C21orf33P30042 268 aaPredicted RBP13.89□□□□□ -0.19
PCOLCE-205ENST00000472348 GLRXP35754 106 aa13.89□□□□□ -0.19
PCOLCE-205ENST00000472348 ZNF83P51522 516 aa13.89□□□□□ -0.19
PCOLCE-205ENST00000472348 CCR9P51686 369 aa13.89□□□□□ -0.19
PCOLCE-205ENST00000472348 HCCSP53701 268 aa13.89□□□□□ -0.19
PCOLCE-205ENST00000472348 TAS2R43P59537 309 aa13.89□□□□□ -0.19
PCOLCE-205ENST00000472348 RPS23P62266 143 aaKnown RBP13.89□□□□□ -0.19
PCOLCE-205ENST00000472348 SP5Q6BEB4 398 aaPredicted RBP13.89□□□□□ -0.19
PCOLCE-205ENST00000472348 LRRN1Q6UXK5 716 aa13.89□□□□□ -0.19
PCOLCE-205ENST00000472348 SSX6Q7RTT6 188 aa13.89□□□□□ -0.19
PCOLCE-205ENST00000472348 PRSS45Q7RTY3 260 aa13.89□□□□□ -0.19
PCOLCE-205ENST00000472348 CCDC54Q8NEL0 328 aa13.89□□□□□ -0.19
PCOLCE-205ENST00000472348 OR5L1Q8NGL2 311 aa13.89□□□□□ -0.19
PCOLCE-205ENST00000472348 C14orf79Q96F83 325 aa13.89□□□□□ -0.19
PCOLCE-205ENST00000472348 MS4A3Q96HJ5 214 aa13.89□□□□□ -0.19
PCOLCE-205ENST00000472348 C4orf45Q96LM5 186 aa13.89□□□□□ -0.19
PCOLCE-205ENST00000472348 RHNO1Q9BSD3 238 aa13.89□□□□□ -0.19
PCOLCE-205ENST00000472348 MND1Q9BWT6 205 aa13.89□□□□□ -0.19
PCOLCE-205ENST00000472348 ZNF442Q9H7R0 627 aa13.89□□□□□ -0.19
PCOLCE-205ENST00000472348 SLCO1C1Q9NYB5 712 aa13.89□□□□□ -0.19
PCOLCE-205ENST00000472348 C5orf49A4QMS7 147 aa13.88□□□□□ -0.19
PCOLCE-205ENST00000472348 TRIM64CA6NLI5 447 aa13.88□□□□□ -0.19
PCOLCE-205ENST00000472348 A6NNC1 897 aa13.88□□□□□ -0.19
PCOLCE-205ENST00000472348 APOL3O95236 402 aa13.88□□□□□ -0.19
PCOLCE-205ENST00000472348 CD1AP06126 327 aa13.88□□□□□ -0.19
PCOLCE-205ENST00000472348 NR4A1P22736 598 aa13.88□□□□□ -0.19
PCOLCE-205ENST00000472348 CFL1P23528 166 aaKnown RBP13.88□□□□□ -0.19
PCOLCE-205ENST00000472348 EEF1B2P24534 225 aaKnown RBP13.88□□□□□ -0.19
PCOLCE-205ENST00000472348 ETV1P50549 477 aa13.88□□□□□ -0.19
PCOLCE-205ENST00000472348 UCP2P55851 309 aa13.88□□□□□ -0.19
PCOLCE-205ENST00000472348 WNT4P56705 351 aa13.88□□□□□ -0.19
PCOLCE-205ENST00000472348 NKX6-1P78426 367 aaPredicted RBP13.88□□□□□ -0.19
PCOLCE-205ENST00000472348 GALK2Q01415 458 aa13.88□□□□□ -0.19
PCOLCE-205ENST00000472348 BSPH1Q075Z2 132 aa13.88□□□□□ -0.19
PCOLCE-205ENST00000472348 LIPNQ5VXI9 398 aa13.88□□□□□ -0.19
PCOLCE-205ENST00000472348 OTPQ5XKR4 325 aa13.88□□□□□ -0.19
PCOLCE-205ENST00000472348 TMEM154Q6P9G4 183 aa13.88□□□□□ -0.19
PCOLCE-205ENST00000472348 LHFPL3Q86UP9 236 aa13.88□□□□□ -0.19
PCOLCE-205ENST00000472348 RPS4Y2Q8TD47 263 aa13.88□□□□□ -0.19
PCOLCE-205ENST00000472348 FCGR1BQ92637 280 aa13.88□□□□□ -0.19
PCOLCE-205ENST00000472348 PLPPR2Q96GM1 343 aa13.88□□□□□ -0.19
PCOLCE-205ENST00000472348 ZC3HAV1LQ96H79 300 aaKnown RBP13.88□□□□□ -0.19
PCOLCE-205ENST00000472348 NUFIP1Q9UHK0 495 aaKnown RBP13.88□□□□□ -0.19
PCOLCE-205ENST00000472348 FBXO9Q9UK97 447 aaPredicted RBP13.88□□□□□ -0.19
PCOLCE-205ENST00000472348 IKZF2Q9UKS7 526 aa13.88□□□□□ -0.19
PCOLCE-205ENST00000472348 RNF115Q9Y4L5 304 aa13.88□□□□□ -0.19
PCOLCE-205ENST00000472348 SNX5Q9Y5X3 404 aa13.88□□□□□ -0.19
PCOLCE-205ENST00000472348 R4GMQ9 66 aa13.88□□□□□ -0.19
PCOLCE-205ENST00000472348 UTP20O75691 2785 aaKnown RBP13.87□□□□□ -0.19
PCOLCE-205ENST00000472348 A0A0U1RQV5 110 aa13.87□□□□□ -0.19
PCOLCE-205ENST00000472348 VSTM5A8MXK1 200 aa13.87□□□□□ -0.19
PCOLCE-205ENST00000472348 PRR32B1ATL7 298 aa13.87□□□□□ -0.19
PCOLCE-205ENST00000472348 MYL12BO14950 172 aa13.87□□□□□ -0.19
PCOLCE-205ENST00000472348 XRCC2O43543 280 aa13.87□□□□□ -0.19
PCOLCE-205ENST00000472348 CELA3BP08861 270 aa13.87□□□□□ -0.19
PCOLCE-205ENST00000472348 HTR1AP08908 422 aa13.87□□□□□ -0.19
PCOLCE-205ENST00000472348 COX6B1P14854 86 aa13.87□□□□□ -0.19
PCOLCE-205ENST00000472348 GPR50Q13585 617 aa13.87□□□□□ -0.19
PCOLCE-205ENST00000472348 ZNF773Q6PK81 442 aa13.87□□□□□ -0.19
PCOLCE-205ENST00000472348 MYPOPQ86VE0 399 aaPredicted RBP13.87□□□□□ -0.19
PCOLCE-205ENST00000472348 RFLNBQ8N5W9 214 aa13.87□□□□□ -0.19
PCOLCE-205ENST00000472348 YIPF7Q8N8F6 280 aa13.87□□□□□ -0.19
PCOLCE-205ENST00000472348 SPSB4Q96A44 273 aa13.87□□□□□ -0.19
PCOLCE-205ENST00000472348 PELI1Q96FA3 418 aa13.87□□□□□ -0.19
PCOLCE-205ENST00000472348 TBX5Q99593 518 aa13.87□□□□□ -0.19
PCOLCE-205ENST00000472348 TRIM36Q9NQ86 728 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms