RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 LDLRAD4O15165 306 aa13.31□□□□□ -0.28
UBXN11-213ENST00000472155 SMAD9O15198 467 aaKnown RBP13.31□□□□□ -0.28
UBXN11-213ENST00000472155 SYT7O43581 403 aa13.31□□□□□ -0.28
UBXN11-213ENST00000472155 Q0VFX4 171 aa13.31□□□□□ -0.28
UBXN11-213ENST00000472155 SLC25A47Q6Q0C1 308 aa13.31□□□□□ -0.28
UBXN11-213ENST00000472155 LUZP2Q86TE4 346 aa13.31□□□□□ -0.28
UBXN11-213ENST00000472155 ELMOD2Q8IZ81 293 aa13.31□□□□□ -0.28
UBXN11-213ENST00000472155 PNRC2Q9NPJ4 139 aaKnown RBP13.31□□□□□ -0.28
UBXN11-213ENST00000472155 SLC39A1Q9NY26 324 aa13.31□□□□□ -0.28
UBXN11-213ENST00000472155 LAMA5O15230 3695 aa13.3□□□□□ -0.28
UBXN11-213ENST00000472155 OR2M5A3KFT3 312 aa13.3□□□□□ -0.28
UBXN11-213ENST00000472155 MPC2O95563 127 aa13.3□□□□□ -0.28
UBXN11-213ENST00000472155 CSN2P05814 226 aa13.3□□□□□ -0.28
UBXN11-213ENST00000472155 ZNF704Q6ZNC4 412 aaPredicted RBP13.3□□□□□ -0.28
UBXN11-213ENST00000472155 TMPPEQ6ZT21 453 aa13.3□□□□□ -0.28
UBXN11-213ENST00000472155 GVQW1Q8N7I0 195 aa13.3□□□□□ -0.28
UBXN11-213ENST00000472155 OR6M1Q8NGM8 313 aa13.3□□□□□ -0.28
UBXN11-213ENST00000472155 GPX8Q8TED1 209 aa13.3□□□□□ -0.28
UBXN11-213ENST00000472155 GPR137Q96N19 417 aa13.3□□□□□ -0.28
UBXN11-213ENST00000472155 ZNF700Q9H0M5 742 aa13.3□□□□□ -0.28
UBXN11-213ENST00000472155 KLK13Q9UKR3 277 aa13.3□□□□□ -0.28
UBXN11-213ENST00000472155 A0A1B0GVI7 797 aa13.3□□□□□ -0.28
UBXN11-213ENST00000472155 AQP7P3A6NL99 342 aa13.3□□□□□ -0.28
UBXN11-213ENST00000472155 TMEM127O75204 238 aa13.3□□□□□ -0.28
UBXN11-213ENST00000472155 WDPCPO95876 746 aa13.3□□□□□ -0.28
UBXN11-213ENST00000472155 ZNF17P17021 662 aa13.3□□□□□ -0.28
UBXN11-213ENST00000472155 ZNF81P51508 661 aa13.3□□□□□ -0.28
UBXN11-213ENST00000472155 ZNF121P58317 390 aaPredicted RBP13.3□□□□□ -0.28
UBXN11-213ENST00000472155 MC2RQ01718 297 aa13.3□□□□□ -0.28
UBXN11-213ENST00000472155 PMPCAQ10713 525 aa13.3□□□□□ -0.28
UBXN11-213ENST00000472155 TMEM244Q5VVB8 128 aa13.3□□□□□ -0.28
UBXN11-213ENST00000472155 METTL11BQ5VVY1 283 aa13.3□□□□□ -0.28
UBXN11-213ENST00000472155 C17orf107Q6ZR85 190 aa13.3□□□□□ -0.28
UBXN11-213ENST00000472155 SLC36A1Q7Z2H8 476 aa13.3□□□□□ -0.28
UBXN11-213ENST00000472155 COMMD2Q86X83 199 aa13.3□□□□□ -0.28
UBXN11-213ENST00000472155 OR8B12Q8NGG6 310 aa13.3□□□□□ -0.28
UBXN11-213ENST00000472155 OR2Y1Q8NGV0 311 aa13.3□□□□□ -0.28
UBXN11-213ENST00000472155 OXGR1Q96P68 337 aa13.3□□□□□ -0.28
UBXN11-213ENST00000472155 CITED4Q96RK1 184 aa13.3□□□□□ -0.28
UBXN11-213ENST00000472155 NPTNQ9Y639 398 aa13.3□□□□□ -0.28
UBXN11-213ENST00000472155 A0A1W2PP11 408 aa13.29□□□□□ -0.28
UBXN11-213ENST00000472155 TP53I11O14683 189 aa13.29□□□□□ -0.28
UBXN11-213ENST00000472155 UBCP0CG48 685 aaKnown RBP13.29□□□□□ -0.28
UBXN11-213ENST00000472155 CD37P11049 281 aa13.29□□□□□ -0.28
UBXN11-213ENST00000472155 TOMM20Q15388 145 aa13.29□□□□□ -0.28
UBXN11-213ENST00000472155 SGCAQ16586 387 aa13.29□□□□□ -0.28
UBXN11-213ENST00000472155 PEAR1Q5VY43 1037 aaPredicted RBP13.29□□□□□ -0.28
UBXN11-213ENST00000472155 CREB3L2Q70SY1 520 aa13.29□□□□□ -0.28
UBXN11-213ENST00000472155 TIPARPQ7Z3E1 657 aaKnown RBP13.29□□□□□ -0.28
UBXN11-213ENST00000472155 ADGRE4PQ86SQ3 457 aa13.29□□□□□ -0.28
UBXN11-213ENST00000472155 GABRG1Q8N1C3 465 aa13.29□□□□□ -0.28
UBXN11-213ENST00000472155 TMEM156Q8N614 296 aa13.29□□□□□ -0.28
UBXN11-213ENST00000472155 OR6X1Q8NH79 312 aa13.29□□□□□ -0.28
UBXN11-213ENST00000472155 FAM71F1Q96KD3 344 aaPredicted RBP13.29□□□□□ -0.28
UBXN11-213ENST00000472155 TRAF4Q9BUZ4 470 aaPredicted RBP13.29□□□□□ -0.28
UBXN11-213ENST00000472155 DPCDQ9BVM2 203 aaPredicted RBP13.29□□□□□ -0.28
UBXN11-213ENST00000472155 ZNF416Q9BWM5 594 aa13.29□□□□□ -0.28
UBXN11-213ENST00000472155 RANBP3Q9H6Z4 567 aaPredicted RBP13.29□□□□□ -0.28
UBXN11-213ENST00000472155 RABL2AQ9UBK7 228 aaPredicted RBP13.29□□□□□ -0.28
UBXN11-213ENST00000472155 RABL2BQ9UNT1 228 aa13.29□□□□□ -0.28
UBXN11-213ENST00000472155 NSG1A0A0A6YYJ2 146 aa13.29□□□□□ -0.28
UBXN11-213ENST00000472155 CFDP00746 253 aaPredicted RBP13.29□□□□□ -0.28
UBXN11-213ENST00000472155 LIPCP11150 499 aa13.29□□□□□ -0.28
UBXN11-213ENST00000472155 LIFP15018 202 aa13.29□□□□□ -0.28
UBXN11-213ENST00000472155 OTX2P32243 289 aa13.29□□□□□ -0.28
UBXN11-213ENST00000472155 PER3P56645 1201 aa13.29□□□□□ -0.28
UBXN11-213ENST00000472155 SCAND1P57086 179 aa13.29□□□□□ -0.28
UBXN11-213ENST00000472155 GPR85P60893 370 aa13.29□□□□□ -0.28
UBXN11-213ENST00000472155 HIST3H3Q16695 136 aa13.29□□□□□ -0.28
UBXN11-213ENST00000472155 C1orf100Q5SVJ3 147 aa13.29□□□□□ -0.28
UBXN11-213ENST00000472155 ZNF626Q68DY1 528 aa13.29□□□□□ -0.28
UBXN11-213ENST00000472155 STEAP1BQ6NZ63 245 aa13.29□□□□□ -0.28
UBXN11-213ENST00000472155 DEGS2Q6QHC5 323 aa13.29□□□□□ -0.28
UBXN11-213ENST00000472155 KLHL24Q6TFL4 600 aa13.29□□□□□ -0.28
UBXN11-213ENST00000472155 ABHD12BQ7Z5M8 362 aaPredicted RBP13.29□□□□□ -0.28
UBXN11-213ENST00000472155 RPS19BP1Q86WX3 136 aaKnown RBP13.29□□□□□ -0.28
UBXN11-213ENST00000472155 LRRC18Q8N456 261 aa13.29□□□□□ -0.28
UBXN11-213ENST00000472155 NICN1Q9BSH3 213 aa13.29□□□□□ -0.28
UBXN11-213ENST00000472155 LOC390937A0A1W2PQ73 354 aa13.28□□□□□ -0.28
UBXN11-213ENST00000472155 TNFSF11O14788 317 aa13.28□□□□□ -0.28
UBXN11-213ENST00000472155 HSD11B1P28845 292 aa13.28□□□□□ -0.28
UBXN11-213ENST00000472155 NTF4P34130 210 aa13.28□□□□□ -0.28
UBXN11-213ENST00000472155 PRSS12P56730 875 aa13.28□□□□□ -0.28
UBXN11-213ENST00000472155 H2BFSP57053 126 aa13.28□□□□□ -0.28
UBXN11-213ENST00000472155 GABREP78334 506 aa13.28□□□□□ -0.28
UBXN11-213ENST00000472155 DCAF12L2Q5VW00 463 aa13.28□□□□□ -0.28
UBXN11-213ENST00000472155 FAM57BQ71RH2 274 aa13.28□□□□□ -0.28
UBXN11-213ENST00000472155 MUC20Q8N307 709 aaPredicted RBP13.28□□□□□ -0.28
UBXN11-213ENST00000472155 MEIOBQ8N635 442 aa13.28□□□□□ -0.28
UBXN11-213ENST00000472155 LIN37Q96GY3 246 aaPredicted RBP13.28□□□□□ -0.28
UBXN11-213ENST00000472155 SRXN1Q9BYN0 137 aa13.28□□□□□ -0.28
UBXN11-213ENST00000472155 GPR84Q9NQS5 396 aa13.28□□□□□ -0.28
UBXN11-213ENST00000472155 LOC100509620A0A075B734 347 aa13.28□□□□□ -0.28
UBXN11-213ENST00000472155 A0A0J9YW62 118 aa13.28□□□□□ -0.28
UBXN11-213ENST00000472155 TTLL8A6PVC2 850 aa13.28□□□□□ -0.28
UBXN11-213ENST00000472155 C9J4A7 227 aa13.28□□□□□ -0.28
UBXN11-213ENST00000472155 TNFRSF10AO00220 468 aa13.28□□□□□ -0.28
UBXN11-213ENST00000472155 CD63P08962 238 aa13.28□□□□□ -0.28
UBXN11-213ENST00000472155 CSF1P09603 554 aa13.28□□□□□ -0.28
UBXN11-213ENST00000472155 RFPL3SP0C7P2 107 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms