RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 ITCHQ96J02 903 aa3.99□□□□□ -1.77
CCDC39-202ENST00000471307 OR52E6Q96RD3 313 aa3.99□□□□□ -1.77
CCDC39-202ENST00000471307 SH3GL1Q99961 368 aa3.99□□□□□ -1.77
CCDC39-202ENST00000471307 HOPXQ9BPY8 73 aaPredicted RBP3.99□□□□□ -1.77
CCDC39-202ENST00000471307 MAPKAP1Q9BPZ7 522 aa3.99□□□□□ -1.77
CCDC39-202ENST00000471307 EBPLQ9BY08 206 aa3.99□□□□□ -1.77
CCDC39-202ENST00000471307 YTHDF1Q9BYJ9 559 aaKnown RBP3.99□□□□□ -1.77
CCDC39-202ENST00000471307 PALMDQ9NP74 551 aa3.99□□□□□ -1.77
CCDC39-202ENST00000471307 MIEF1Q9NQG6 463 aa3.99□□□□□ -1.77
CCDC39-202ENST00000471307 STARD5Q9NSY2 213 aa3.99□□□□□ -1.77
CCDC39-202ENST00000471307 GID8Q9NWU2 228 aa3.99□□□□□ -1.77
CCDC39-202ENST00000471307 TAS2R1Q9NYW7 299 aa3.99□□□□□ -1.77
CCDC39-202ENST00000471307 PRO0461Q9UI25 63 aa3.99□□□□□ -1.77
CCDC39-202ENST00000471307 BTNL2Q9UIR0 455 aa3.99□□□□□ -1.77
CCDC39-202ENST00000471307 ERVK-19Q9WJR5 959 aa3.99□□□□□ -1.77
CCDC39-202ENST00000471307 ENTPD4Q9Y227 616 aa3.99□□□□□ -1.77
CCDC39-202ENST00000471307 MRPS33Q9Y291 106 aaKnown RBP3.99□□□□□ -1.77
CCDC39-202ENST00000471307 MRPS2Q9Y399 296 aaKnown RBP3.99□□□□□ -1.77
CCDC39-202ENST00000471307 ATG4BQ9Y4P1 393 aa3.99□□□□□ -1.77
CCDC39-202ENST00000471307 SCN2AQ99250 2005 aa3.99□□□□□ -1.77
CCDC39-202ENST00000471307 CEP250Q9BV73 2442 aa3.99□□□□□ -1.77
CCDC39-202ENST00000471307 A0A096LPI6 279 aa3.98□□□□□ -1.77
CCDC39-202ENST00000471307 A0A0G2JN53 185 aa3.98□□□□□ -1.77
CCDC39-202ENST00000471307 A0A1B0GX78 115 aa3.98□□□□□ -1.77
CCDC39-202ENST00000471307 LOC390937A0A1W2PQ73 354 aa3.98□□□□□ -1.77
CCDC39-202ENST00000471307 FAM220BPB1ANY3 271 aa3.98□□□□□ -1.77
CCDC39-202ENST00000471307 C4orf51C9J302 202 aa3.98□□□□□ -1.77
CCDC39-202ENST00000471307 SGK494L7N484 410 aa3.98□□□□□ -1.77
CCDC39-202ENST00000471307 RFXANKO14593 260 aa3.98□□□□□ -1.77
CCDC39-202ENST00000471307 MRASO14807 208 aa3.98□□□□□ -1.77
CCDC39-202ENST00000471307 AIM2O14862 343 aa3.98□□□□□ -1.77
CCDC39-202ENST00000471307 GYG2O15488 501 aa3.98□□□□□ -1.77
CCDC39-202ENST00000471307 CTNSO60931 367 aa3.98□□□□□ -1.77
CCDC39-202ENST00000471307 SCN2BO60939 215 aa3.98□□□□□ -1.77
CCDC39-202ENST00000471307 CSO75390 466 aaKnown RBP3.98□□□□□ -1.77
CCDC39-202ENST00000471307 SCRG1O75711 98 aa3.98□□□□□ -1.77
CCDC39-202ENST00000471307 LRATO95237 230 aa3.98□□□□□ -1.77
CCDC39-202ENST00000471307 GPR75O95800 540 aa3.98□□□□□ -1.77
CCDC39-202ENST00000471307 AIFM1O95831 613 aa3.98□□□□□ -1.77
CCDC39-202ENST00000471307 KLK3P07288 261 aaPredicted RBP3.98□□□□□ -1.77
CCDC39-202ENST00000471307 ZCCHC18P0CG32 403 aa3.98□□□□□ -1.77
CCDC39-202ENST00000471307 IL1RNP18510 177 aa3.98□□□□□ -1.77
CCDC39-202ENST00000471307 CSNK2A2P19784 350 aaPredicted RBP3.98□□□□□ -1.77
CCDC39-202ENST00000471307 PPP2R1BP30154 601 aa3.98□□□□□ -1.77
CCDC39-202ENST00000471307 RAB38P57729 211 aa3.98□□□□□ -1.77
CCDC39-202ENST00000471307 IGLV3-21P80748 117 aaPredicted RBP3.98□□□□□ -1.77
CCDC39-202ENST00000471307 DCDP81605 110 aaKnown RBP3.98□□□□□ -1.77
CCDC39-202ENST00000471307 SPIBQ01892 262 aa3.98□□□□□ -1.77
CCDC39-202ENST00000471307 TNFRSF17Q02223 184 aa3.98□□□□□ -1.77
CCDC39-202ENST00000471307 HSF2Q03933 536 aa3.98□□□□□ -1.77
CCDC39-202ENST00000471307 PCK2Q16822 640 aa3.98□□□□□ -1.77
CCDC39-202ENST00000471307 TIMM50Q3ZCQ8 353 aa3.98□□□□□ -1.77
CCDC39-202ENST00000471307 DNAL1Q4LDG9 190 aa3.98□□□□□ -1.77
CCDC39-202ENST00000471307 SPATA46Q5T0L3 261 aa3.98□□□□□ -1.77
CCDC39-202ENST00000471307 DCAF12Q5T6F0 453 aa3.98□□□□□ -1.77
CCDC39-202ENST00000471307 PRAMEF7Q5VXH5 474 aa3.98□□□□□ -1.77
CCDC39-202ENST00000471307 OR4F3Q6IEY1 312 aa3.98□□□□□ -1.77
CCDC39-202ENST00000471307 OR52E8Q6IFG1 317 aa3.98□□□□□ -1.77
CCDC39-202ENST00000471307 SLC48A1Q6P1K1 146 aa3.98□□□□□ -1.77
CCDC39-202ENST00000471307 PAMR1Q6UXH9 720 aa3.98□□□□□ -1.77
CCDC39-202ENST00000471307 ASRGL1Q7L266 308 aa3.98□□□□□ -1.77
CCDC39-202ENST00000471307 PRSS41Q7RTY9 318 aa3.98□□□□□ -1.77
CCDC39-202ENST00000471307 VASH2Q86V25 355 aa3.98□□□□□ -1.77
CCDC39-202ENST00000471307 SLC34A3Q8N130 599 aa3.98□□□□□ -1.77
CCDC39-202ENST00000471307 CA13Q8N1Q1 262 aa3.98□□□□□ -1.77
CCDC39-202ENST00000471307 TRIML2Q8N7C3 387 aa3.98□□□□□ -1.77
CCDC39-202ENST00000471307 DEFB124Q8NES8 71 aa3.98□□□□□ -1.77
CCDC39-202ENST00000471307 OR4K14Q8NGD5 310 aa3.98□□□□□ -1.77
CCDC39-202ENST00000471307 OR13C5Q8NGS8 318 aa3.98□□□□□ -1.77
CCDC39-202ENST00000471307 OR51Q1Q8NH59 317 aa3.98□□□□□ -1.77
CCDC39-202ENST00000471307 OR4A16Q8NH70 328 aa3.98□□□□□ -1.77
CCDC39-202ENST00000471307 CDC26Q8NHZ8 85 aa3.98□□□□□ -1.77
CCDC39-202ENST00000471307 WDR36Q8NI36 951 aaKnown RBP3.98□□□□□ -1.77
CCDC39-202ENST00000471307 OR5P2Q8WZ92 322 aa3.98□□□□□ -1.77
CCDC39-202ENST00000471307 GTF2H4Q92759 462 aa3.98□□□□□ -1.77
CCDC39-202ENST00000471307 HAS2Q92819 552 aa3.98□□□□□ -1.77
CCDC39-202ENST00000471307 RCN3Q96D15 328 aa3.98□□□□□ -1.77
CCDC39-202ENST00000471307 ZBED6CLQ96FA7 236 aaPredicted RBP3.98□□□□□ -1.77
CCDC39-202ENST00000471307 CCDC115Q96NT0 180 aa3.98□□□□□ -1.77
CCDC39-202ENST00000471307 COQ7Q99807 217 aa3.98□□□□□ -1.77
CCDC39-202ENST00000471307 SLC7A5P2Q9GIP4 190 aa3.98□□□□□ -1.77
CCDC39-202ENST00000471307 RPF2Q9H7B2 306 aaKnown RBP3.98□□□□□ -1.77
CCDC39-202ENST00000471307 SLC39A1Q9NY26 324 aa3.98□□□□□ -1.77
CCDC39-202ENST00000471307 TAS2R9Q9NYW1 312 aa3.98□□□□□ -1.77
CCDC39-202ENST00000471307 COPS7AQ9UBW8 275 aa3.98□□□□□ -1.77
CCDC39-202ENST00000471307 CES1P1Q9UKY3 287 aa3.98□□□□□ -1.77
CCDC39-202ENST00000471307 ZNF346Q9UL40 294 aaKnown RBP3.98□□□□□ -1.77
CCDC39-202ENST00000471307 AP3M1Q9Y2T2 418 aa3.98□□□□□ -1.77
CCDC39-202ENST00000471307 GMEB1Q9Y692 573 aa3.98□□□□□ -1.77
CCDC39-202ENST00000471307 ZNF780BQ9Y6R6 833 aa3.98□□□□□ -1.77
CCDC39-202ENST00000471307 COL27A1Q8IZC6 1860 aaPredicted RBP3.97□□□□□ -1.77
CCDC39-202ENST00000471307 IGLV3-12A0A075B6K2 115 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 SPAARA0A1B0GVQ0 90 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 ERICH4A6NGS2 130 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 ZNF860A6NHJ4 632 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 EVPLLA8MZ36 301 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 C9JVG2 144 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 CHEK1O14757 476 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 NME2P1O60361 137 aa3.97□□□□□ -1.77
CCDC39-202ENST00000471307 DNAJB6O75190 326 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms