RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 RHCEP18577 417 aa11.55□□□□□ -0.56
HMGN1-211ENST00000471260 PRKACGP22612 351 aa11.55□□□□□ -0.56
HMGN1-211ENST00000471260 APEX1P27695 318 aaKnown RBP11.55□□□□□ -0.56
HMGN1-211ENST00000471260 FMODQ06828 376 aa11.55□□□□□ -0.56
HMGN1-211ENST00000471260 AQP6Q13520 282 aa11.55□□□□□ -0.56
HMGN1-211ENST00000471260 FHL1Q13642 323 aa11.55□□□□□ -0.56
HMGN1-211ENST00000471260 DGCR6Q14129 220 aa11.55□□□□□ -0.56
HMGN1-211ENST00000471260 FAM120AOSQ5T036 256 aa11.55□□□□□ -0.56
HMGN1-211ENST00000471260 LINC01356Q8N9X3 169 aa11.55□□□□□ -0.56
HMGN1-211ENST00000471260 CPEB3Q8NE35 698 aaKnown RBP11.55□□□□□ -0.56
HMGN1-211ENST00000471260 OR4C15Q8NGM1 316 aa11.55□□□□□ -0.56
HMGN1-211ENST00000471260 NSMAFQ92636 917 aa11.55□□□□□ -0.56
HMGN1-211ENST00000471260 POM121L2Q96KW2 1035 aa11.55□□□□□ -0.56
HMGN1-211ENST00000471260 CCDC90BQ9GZT6 254 aa11.55□□□□□ -0.56
HMGN1-211ENST00000471260 HINT3Q9NQE9 182 aaKnown RBP11.55□□□□□ -0.56
HMGN1-211ENST00000471260 FZR1Q9UM11 496 aa11.55□□□□□ -0.56
HMGN1-211ENST00000471260 FAM32AQ9Y421 112 aaKnown RBP11.55□□□□□ -0.56
HMGN1-211ENST00000471260 TIMM10BQ9Y5J6 103 aa11.55□□□□□ -0.56
HMGN1-211ENST00000471260 DNHD1Q96M86 4753 aa11.54□□□□□ -0.56
HMGN1-211ENST00000471260 TNFRSF11BO00300 401 aa11.54□□□□□ -0.56
HMGN1-211ENST00000471260 MITFO75030 526 aaPredicted RBP11.54□□□□□ -0.56
HMGN1-211ENST00000471260 INMTO95050 263 aa11.54□□□□□ -0.56
HMGN1-211ENST00000471260 IGHV3-13P01766 116 aa11.54□□□□□ -0.56
HMGN1-211ENST00000471260 MT-ND2P03891 347 aa11.54□□□□□ -0.56
HMGN1-211ENST00000471260 CD14P08571 375 aa11.54□□□□□ -0.56
HMGN1-211ENST00000471260 NAT2P11245 290 aa11.54□□□□□ -0.56
HMGN1-211ENST00000471260 MSR1P21757 451 aa11.54□□□□□ -0.56
HMGN1-211ENST00000471260 COL8A2P25067 703 aa11.54□□□□□ -0.56
HMGN1-211ENST00000471260 RRM2P31350 389 aa11.54□□□□□ -0.56
HMGN1-211ENST00000471260 LIPAP38571 399 aa11.54□□□□□ -0.56
HMGN1-211ENST00000471260 GPR6P46095 362 aaPredicted RBP11.54□□□□□ -0.56
HMGN1-211ENST00000471260 GDI2P50395 445 aaKnown RBP11.54□□□□□ -0.56
HMGN1-211ENST00000471260 PSG4Q00888 419 aa11.54□□□□□ -0.56
HMGN1-211ENST00000471260 SPCS2Q15005 226 aa11.54□□□□□ -0.56
HMGN1-211ENST00000471260 ZNF718Q3SXZ3 478 aa11.54□□□□□ -0.56
HMGN1-211ENST00000471260 FAM209AQ5JX71 171 aa11.54□□□□□ -0.56
HMGN1-211ENST00000471260 OR10G2Q8NGC3 310 aa11.54□□□□□ -0.56
HMGN1-211ENST00000471260 OR1J1Q8NGS3 322 aa11.54□□□□□ -0.56
HMGN1-211ENST00000471260 DYNC2LI1Q8TCX1 351 aa11.54□□□□□ -0.56
HMGN1-211ENST00000471260 TSPAN32Q96QS1 320 aa11.54□□□□□ -0.56
HMGN1-211ENST00000471260 SNX18Q96RF0 628 aa11.54□□□□□ -0.56
HMGN1-211ENST00000471260 ZNF556Q9HAH1 456 aa11.54□□□□□ -0.56
HMGN1-211ENST00000471260 KRCC1Q9NPI7 259 aaPredicted RBP11.54□□□□□ -0.56
HMGN1-211ENST00000471260 CNOT2Q9NZN8 540 aaKnown RBP11.54□□□□□ -0.56
HMGN1-211ENST00000471260 CCDC59Q9P031 241 aaKnown RBP11.54□□□□□ -0.56
HMGN1-211ENST00000471260 GRHPRQ9UBQ7 328 aa11.54□□□□□ -0.56
HMGN1-211ENST00000471260 C5orf49A4QMS7 147 aa11.53□□□□□ -0.56
HMGN1-211ENST00000471260 C12orf71A8MTZ7 269 aa11.53□□□□□ -0.56
HMGN1-211ENST00000471260 B4DSR2 109 aa11.53□□□□□ -0.56
HMGN1-211ENST00000471260 PTGES3LE9PB15 166 aa11.53□□□□□ -0.56
HMGN1-211ENST00000471260 LYNX1G3V0Z9 82 aa11.53□□□□□ -0.56
HMGN1-211ENST00000471260 XKRYO14609 159 aa11.53□□□□□ -0.56
HMGN1-211ENST00000471260 CDC42EP2O14613 210 aa11.53□□□□□ -0.56
HMGN1-211ENST00000471260 XPNPEP2O43895 674 aa11.53□□□□□ -0.56
HMGN1-211ENST00000471260 WBP4O75554 376 aaKnown RBP11.53□□□□□ -0.56
HMGN1-211ENST00000471260 TFP02787 698 aa11.53□□□□□ -0.56
HMGN1-211ENST00000471260 H1F0P07305 194 aaKnown RBP11.53□□□□□ -0.56
HMGN1-211ENST00000471260 HNRNPCP07910 306 aaKnown RBP eCLIP11.53□□□□□ -0.56
HMGN1-211ENST00000471260 LYNX1P0DP58 116 aa11.53□□□□□ -0.56
HMGN1-211ENST00000471260 COX5BP10606 129 aa11.53□□□□□ -0.56
HMGN1-211ENST00000471260 PIPP12273 146 aaPredicted RBP11.53□□□□□ -0.56
HMGN1-211ENST00000471260 FUT4P22083 530 aa11.53□□□□□ -0.56
HMGN1-211ENST00000471260 CCNOP22674 350 aa11.53□□□□□ -0.56
HMGN1-211ENST00000471260 TUBG1P23258 451 aa11.53□□□□□ -0.56
HMGN1-211ENST00000471260 PSMB9P28065 219 aa11.53□□□□□ -0.56
HMGN1-211ENST00000471260 LAP3P28838 519 aa11.53□□□□□ -0.56
HMGN1-211ENST00000471260 CD40LGP29965 261 aa11.53□□□□□ -0.56
HMGN1-211ENST00000471260 GCH1P30793 250 aa11.53□□□□□ -0.56
HMGN1-211ENST00000471260 FMO3P31513 532 aa11.53□□□□□ -0.56
HMGN1-211ENST00000471260 RPL4P36578 427 aaKnown RBP11.53□□□□□ -0.56
HMGN1-211ENST00000471260 HMGA2P52926 109 aa11.53□□□□□ -0.56
HMGN1-211ENST00000471260 ERVK-25P63136 954 aa11.53□□□□□ -0.56
HMGN1-211ENST00000471260 MICAQ29983 383 aa11.53□□□□□ -0.56
HMGN1-211ENST00000471260 TIMM50Q3ZCQ8 353 aa11.53□□□□□ -0.56
HMGN1-211ENST00000471260 MBNL2Q5VZF2 373 aaKnown RBP11.53□□□□□ -0.56
HMGN1-211ENST00000471260 GPR139Q6DWJ6 353 aa11.53□□□□□ -0.56
HMGN1-211ENST00000471260 ARL9Q6T311 187 aa11.53□□□□□ -0.56
HMGN1-211ENST00000471260 TSEN54Q7Z6J9 526 aaKnown RBP11.53□□□□□ -0.56
HMGN1-211ENST00000471260 IGFN1Q86VF2 1251 aa11.53□□□□□ -0.56
HMGN1-211ENST00000471260 ENTHD1Q8IYW4 607 aa11.53□□□□□ -0.56
HMGN1-211ENST00000471260 CENPSQ8N2Z9 138 aa11.53□□□□□ -0.56
HMGN1-211ENST00000471260 OR13C2Q8NGS9 318 aa11.53□□□□□ -0.56
HMGN1-211ENST00000471260 SLC7A13Q8TCU3 470 aa11.53□□□□□ -0.56
HMGN1-211ENST00000471260 SOX7Q9BT81 388 aa11.53□□□□□ -0.56
HMGN1-211ENST00000471260 MROQ9BYG7 248 aa11.53□□□□□ -0.56
HMGN1-211ENST00000471260 OR2H1Q9GZK4 316 aa11.53□□□□□ -0.56
HMGN1-211ENST00000471260 ELOVL3Q9HB03 270 aa11.53□□□□□ -0.56
HMGN1-211ENST00000471260 TUBG2Q9NRH3 451 aa11.53□□□□□ -0.56
HMGN1-211ENST00000471260 ZNF275Q9NSD4 429 aaPredicted RBP11.53□□□□□ -0.56
HMGN1-211ENST00000471260 NDUFAF4Q9P032 175 aa11.53□□□□□ -0.56
HMGN1-211ENST00000471260 ERVK-18Q9QC07 812 aa11.53□□□□□ -0.56
HMGN1-211ENST00000471260 CGGBP1Q9UFW8 167 aaPredicted RBP11.53□□□□□ -0.56
HMGN1-211ENST00000471260 PSORS1C1Q9UIG5 152 aa11.53□□□□□ -0.56
HMGN1-211ENST00000471260 COL6A5A8TX70 2615 aa11.53□□□□□ -0.56
HMGN1-211ENST00000471260 LOC100509620A0A075B734 347 aa11.52□□□□□ -0.57
HMGN1-211ENST00000471260 ISPDA4D126 451 aa11.52□□□□□ -0.57
HMGN1-211ENST00000471260 EFCAB10A6NFE3 127 aa11.52□□□□□ -0.57
HMGN1-211ENST00000471260 RNF212BA8MTL3 300 aa11.52□□□□□ -0.57
HMGN1-211ENST00000471260 PTP4A3O75365 173 aa11.52□□□□□ -0.57
HMGN1-211ENST00000471260 RP2O75695 350 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms