RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 ARL5CA6NH57 179 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 NPIPB15A6NHN6 443 aaPredicted RBP3.81□□□□□ -1.8
VPS50-210ENST00000471188 DHRS7CA6NNS2 312 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 ZNF724A8MTY0 619 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 FAM157AC9JC47 383 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 H3BQ15 152 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 K7EPK0 472 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 MASP2O00187 686 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 BHLHE40O14503 412 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 DVL1O14640 695 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 SLC16A5O15375 505 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 CRYABP02511 175 aaKnown RBP3.81□□□□□ -1.8
VPS50-210ENST00000471188 RPLP2P05387 115 aaKnown RBP3.81□□□□□ -1.8
VPS50-210ENST00000471188 CTSHP09668 335 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 OR4A8P0C604 315 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 CSF2RAP15509 400 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 COL8A1P27658 744 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 KIR3DL2P43630 455 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 CCR4P51679 360 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 LBX1P52954 281 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 PTTG1IPP53801 180 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 NANOS3P60323 173 aaKnown RBP3.81□□□□□ -1.8
VPS50-210ENST00000471188 VAMP2P63027 116 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 NKAIN1Q4KMZ8 207 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 PLEKHS1Q5SXH7 462 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 RTL6Q6ICC9 239 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 LEG1Q6P5S2 330 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 GALNTL5Q7Z4T8 443 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 FAM71E2Q8N5Q1 922 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 C11orf42Q8N5U0 333 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 TTC9BQ8N6N2 239 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 ZNF417Q8TAU3 575 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 FAM213BQ8TBF2 198 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 GRHL3Q8TE85 626 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 ABHD5Q8WTS1 349 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 FGF13Q92913 245 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 SCAMP4Q969E2 229 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 FAM3DQ96BQ1 224 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 SEH1LQ96EE3 360 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 MRGPRX4Q96LA9 322 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 Q96M85 177 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 SERINC2Q96SA4 455 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 ZNF700Q9H0M5 742 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 SERINC1Q9NRX5 453 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 MYOTQ9UBF9 498 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 PITPNC1Q9UKF7 332 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 RAB22AQ9UL26 194 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 PADI1Q9ULC6 663 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 ICKQ9UPZ9 632 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 MRPS18CQ9Y3D5 142 aaKnown RBP3.81□□□□□ -1.8
VPS50-210ENST00000471188 V9GYS6 101 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 FRMPD3Q5JV73 1810 aa3.81□□□□□ -1.8
VPS50-210ENST00000471188 SCN2AQ99250 2005 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 KIF26AQ9ULI4 1882 aaPredicted RBP3.8□□□□□ -1.8
VPS50-210ENST00000471188 TRBV5-4A0A0C4DH59 114 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.8□□□□□ -1.8
VPS50-210ENST00000471188 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.8□□□□□ -1.8
VPS50-210ENST00000471188 A0A1W2PPC1 479 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 CCDC85CA6NKD9 419 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 H0YL77 283 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 M0QZQ0 153 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 RAB27BO00194 218 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 PEX12O00623 359 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 TP53I11O14683 189 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 SYT7O43581 403 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 FCMRO60667 390 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 LEFTY1O75610 366 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 KLF8O95600 359 aaPredicted RBP3.8□□□□□ -1.8
VPS50-210ENST00000471188 AMBPP02760 352 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 PET100P0DJ07 73 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 LAMP2P13473 410 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 GDI1P31150 447 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 CCKBRP32239 447 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 FRKP42685 505 aaPredicted RBP3.8□□□□□ -1.8
VPS50-210ENST00000471188 CX3CR1P49238 355 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 POLR2HP52434 150 aaKnown RBP3.8□□□□□ -1.8
VPS50-210ENST00000471188 ERVFC1-1P60608 527 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 HSD11B2P80365 405 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 DLK1P80370 383 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 CDC42EP1Q00587 391 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 EGR3Q06889 387 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 PMS2P11Q13670 270 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 RAB11BQ15907 218 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 HAGHQ16775 308 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 DNLZQ5SXM8 178 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 ZNF774Q6NX45 483 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 PRSS54Q6PEW0 395 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 ANKRD33Q7Z3H0 272 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 SLC25A42Q86VD7 318 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 C1orf87Q8N0U7 546 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 SYS1Q8N2H4 156 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 C17orf78Q8N4C9 275 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 COMMD1Q8N668 190 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 TMEM229BQ8NBD8 167 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 APCDD1LQ8NCL9 501 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 MARCH1Q8TCQ1 289 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 GPX8Q8TED1 209 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 TMEM239Q8WW34 195 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 COL26A1Q96A83 441 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 BPIFA2Q96DR5 249 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms