RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 GYPAP02724 150 aa7.52□□□□□ -1.21
CCDC171-204ENST00000470191 COX5BP10606 129 aa7.52□□□□□ -1.21
CCDC171-204ENST00000470191 GABRA5P31644 462 aa7.52□□□□□ -1.21
CCDC171-204ENST00000470191 MTPNP58546 118 aa7.52□□□□□ -1.21
CCDC171-204ENST00000470191 SCRN3Q0VDG4 424 aa7.52□□□□□ -1.21
CCDC171-204ENST00000470191 COX10Q12887 443 aa7.52□□□□□ -1.21
CCDC171-204ENST00000470191 KLRD1Q13241 179 aa7.52□□□□□ -1.21
CCDC171-204ENST00000470191 SELPLGQ14242 412 aa7.52□□□□□ -1.21
CCDC171-204ENST00000470191 MPPED2Q15777 294 aa7.52□□□□□ -1.21
CCDC171-204ENST00000470191 ZBTB37Q5TC79 503 aa7.52□□□□□ -1.21
CCDC171-204ENST00000470191 CCBE1Q6UXH8 406 aaPredicted RBP7.52□□□□□ -1.21
CCDC171-204ENST00000470191 FOXL2NBQ6ZUU3 175 aa7.52□□□□□ -1.21
CCDC171-204ENST00000470191 BTN2A1Q7KYR7 527 aa7.52□□□□□ -1.21
CCDC171-204ENST00000470191 SYT9Q86SS6 491 aa7.52□□□□□ -1.21
CCDC171-204ENST00000470191 FGFRL1Q8N441 504 aa7.52□□□□□ -1.21
CCDC171-204ENST00000470191 TMEM239Q8WW34 195 aa7.52□□□□□ -1.21
CCDC171-204ENST00000470191 ST8SIA4Q92187 359 aa7.52□□□□□ -1.21
CCDC171-204ENST00000470191 PPP1R14AQ96A00 147 aa7.52□□□□□ -1.21
CCDC171-204ENST00000470191 TAMM41Q96BW9 452 aa7.52□□□□□ -1.21
CCDC171-204ENST00000470191 SSU72Q9NP77 194 aaKnown RBP7.52□□□□□ -1.21
CCDC171-204ENST00000470191 TMEM100Q9NV29 134 aa7.52□□□□□ -1.21
CCDC171-204ENST00000470191 NECAP2Q9NVZ3 263 aa7.52□□□□□ -1.21
CCDC171-204ENST00000470191 RIMS3Q9UJD0 308 aa7.52□□□□□ -1.21
CCDC171-204ENST00000470191 VPREB3Q9UKI3 123 aa7.52□□□□□ -1.21
CCDC171-204ENST00000470191 SH3GLB1Q9Y371 365 aa7.52□□□□□ -1.21
CCDC171-204ENST00000470191 KMT2CQ8NEZ4 4911 aaKnown RBP7.52□□□□□ -1.21
CCDC171-204ENST00000470191 IGHV3OR15-7A0A075B7D8 119 aa7.51□□□□□ -1.21
CCDC171-204ENST00000470191 TRAV27A0A087WT01 109 aa7.51□□□□□ -1.21
CCDC171-204ENST00000470191 TRBV5-3A0A0A0MS03 114 aa7.51□□□□□ -1.21
CCDC171-204ENST00000470191 TSPAN9O75954 239 aa7.51□□□□□ -1.21
CCDC171-204ENST00000470191 LIPFP07098 398 aa7.51□□□□□ -1.21
CCDC171-204ENST00000470191 VIMP08670 466 aaKnown RBP7.51□□□□□ -1.21
CCDC171-204ENST00000470191 FBP1P09467 338 aa7.51□□□□□ -1.21
CCDC171-204ENST00000470191 VSIG10L2P0DP72 767 aa7.51□□□□□ -1.21
CCDC171-204ENST00000470191 IFI30P13284 250 aa7.51□□□□□ -1.21
CCDC171-204ENST00000470191 TUBG1P23258 451 aa7.51□□□□□ -1.21
CCDC171-204ENST00000470191 LORP23490 312 aaPredicted RBP7.51□□□□□ -1.21
CCDC171-204ENST00000470191 TGFBR2P37173 567 aa7.51□□□□□ -1.21
CCDC171-204ENST00000470191 PSMB10P40306 273 aa7.51□□□□□ -1.21
CCDC171-204ENST00000470191 CENPAP49450 140 aa7.51□□□□□ -1.21
CCDC171-204ENST00000470191 NPY4RP50391 375 aa7.51□□□□□ -1.21
CCDC171-204ENST00000470191 WDR4P57081 412 aaKnown RBP7.51□□□□□ -1.21
CCDC171-204ENST00000470191 MAB21L1Q13394 359 aa7.51□□□□□ -1.21
CCDC171-204ENST00000470191 PIN1Q13526 163 aaPredicted RBP7.51□□□□□ -1.21
CCDC171-204ENST00000470191 LY6EQ16553 131 aa7.51□□□□□ -1.21
CCDC171-204ENST00000470191 ZNF181Q2M3W8 571 aa7.51□□□□□ -1.21
CCDC171-204ENST00000470191 AGKQ53H12 422 aa7.51□□□□□ -1.21
CCDC171-204ENST00000470191 CLEC12AQ5QGZ9 265 aa7.51□□□□□ -1.21
CCDC171-204ENST00000470191 FBXW12Q6X9E4 464 aa7.51□□□□□ -1.21
CCDC171-204ENST00000470191 PNKDQ8N490 385 aa7.51□□□□□ -1.21
CCDC171-204ENST00000470191 KLHDC1Q8N7A1 406 aa7.51□□□□□ -1.21
CCDC171-204ENST00000470191 OR5L1Q8NGL2 311 aa7.51□□□□□ -1.21
CCDC171-204ENST00000470191 OR51A7Q8NH64 312 aa7.51□□□□□ -1.21
CCDC171-204ENST00000470191 OR1F12Q8NHA8 337 aa7.51□□□□□ -1.21
CCDC171-204ENST00000470191 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.51□□□□□ -1.21
CCDC171-204ENST00000470191 PHF21AQ96BD5 680 aa7.51□□□□□ -1.21
CCDC171-204ENST00000470191 COG8Q96MW5 612 aa7.51□□□□□ -1.21
CCDC171-204ENST00000470191 ECSITQ9BQ95 431 aa7.51□□□□□ -1.21
CCDC171-204ENST00000470191 SIRT7Q9NRC8 400 aa7.51□□□□□ -1.21
CCDC171-204ENST00000470191 TUBG2Q9NRH3 451 aa7.51□□□□□ -1.21
CCDC171-204ENST00000470191 ZNRD1Q9P1U0 126 aa7.51□□□□□ -1.21
CCDC171-204ENST00000470191 RNF7Q9UBF6 113 aa7.51□□□□□ -1.21
CCDC171-204ENST00000470191 POLR1DQ9Y2S0 133 aa7.51□□□□□ -1.21
CCDC171-204ENST00000470191 MED31Q9Y3C7 131 aa7.51□□□□□ -1.21
CCDC171-204ENST00000470191 USH1CQ9Y6N9 552 aa7.51□□□□□ -1.21
CCDC171-204ENST00000470191 COL7A1Q02388 2944 aa7.51□□□□□ -1.21
CCDC171-204ENST00000470191 A6NIZ1 184 aa7.5□□□□□ -1.21
CCDC171-204ENST00000470191 NPIPB13A6NJU9 1138 aa7.5□□□□□ -1.21
CCDC171-204ENST00000470191 IQCF6A8MYZ5 107 aa7.5□□□□□ -1.21
CCDC171-204ENST00000470191 NPIPB4C9JG80 1138 aa7.5□□□□□ -1.21
CCDC171-204ENST00000470191 DVL1O14640 695 aa7.5□□□□□ -1.21
CCDC171-204ENST00000470191 RER1O15258 196 aa7.5□□□□□ -1.21
CCDC171-204ENST00000470191 POLR3GO15318 223 aaPredicted RBP7.5□□□□□ -1.21
CCDC171-204ENST00000470191 FCN3O75636 299 aa7.5□□□□□ -1.21
CCDC171-204ENST00000470191 PAHP00439 452 aa7.5□□□□□ -1.21
CCDC171-204ENST00000470191 RPL4P36578 427 aaKnown RBP7.5□□□□□ -1.21
CCDC171-204ENST00000470191 RBM34P42696 430 aaKnown RBP7.5□□□□□ -1.21
CCDC171-204ENST00000470191 OR1E2P47887 323 aa7.5□□□□□ -1.21
CCDC171-204ENST00000470191 RAP1BP61224 184 aa7.5□□□□□ -1.21
CCDC171-204ENST00000470191 RAP1AP62834 184 aa7.5□□□□□ -1.21
CCDC171-204ENST00000470191 ELF3P78545 371 aaPredicted RBP7.5□□□□□ -1.21
CCDC171-204ENST00000470191 AQP6Q13520 282 aa7.5□□□□□ -1.21
CCDC171-204ENST00000470191 OR8G1Q15617 311 aa7.5□□□□□ -1.21
CCDC171-204ENST00000470191 CCDC92Q53HC0 331 aaPredicted RBP7.5□□□□□ -1.21
CCDC171-204ENST00000470191 DEFB121Q5J5C9 76 aa7.5□□□□□ -1.21
CCDC171-204ENST00000470191 BEND6Q5SZJ8 279 aaPredicted RBP7.5□□□□□ -1.21
CCDC171-204ENST00000470191 INTS11Q5TA45 600 aaKnown RBP7.5□□□□□ -1.21
CCDC171-204ENST00000470191 FOXB2Q5VYV0 432 aa7.5□□□□□ -1.21
CCDC171-204ENST00000470191 PATL1Q86TB9 770 aaKnown RBP7.5□□□□□ -1.21
CCDC171-204ENST00000470191 FNDC8Q8TC99 324 aa7.5□□□□□ -1.21
CCDC171-204ENST00000470191 RASD2Q96D21 266 aa7.5□□□□□ -1.21
CCDC171-204ENST00000470191 BPIFA2Q96DR5 249 aa7.5□□□□□ -1.21
CCDC171-204ENST00000470191 TMEM109Q9BVC6 243 aa7.5□□□□□ -1.21
CCDC171-204ENST00000470191 HCAR1Q9BXC0 346 aa7.5□□□□□ -1.21
CCDC171-204ENST00000470191 PCDHAC1Q9H158 963 aa7.5□□□□□ -1.21
CCDC171-204ENST00000470191 MMP28Q9H239 520 aa7.5□□□□□ -1.21
CCDC171-204ENST00000470191 HIF3AQ9Y2N7 669 aa7.5□□□□□ -1.21
CCDC171-204ENST00000470191 CAB39Q9Y376 341 aaPredicted RBP7.5□□□□□ -1.21
CCDC171-204ENST00000470191 ADAM18Q9Y3Q7 739 aa7.5□□□□□ -1.21
CCDC171-204ENST00000470191 RYR3Q15413 4870 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms