RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 MEP1BQ16820 701 aa14.67□□□□□ -0.06
COL7A1-208ENST00000470076 ZNF181Q2M3W8 571 aa14.67□□□□□ -0.06
COL7A1-208ENST00000470076 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.67□□□□□ -0.06
COL7A1-208ENST00000470076 FAM86B1Q8N7N1 296 aa14.67□□□□□ -0.06
COL7A1-208ENST00000470076 OR52J3Q8NH60 311 aa14.67□□□□□ -0.06
COL7A1-208ENST00000470076 ZNF420Q8TAQ5 688 aaPredicted RBP14.67□□□□□ -0.06
COL7A1-208ENST00000470076 FANK1Q8TC84 345 aa14.67□□□□□ -0.06
COL7A1-208ENST00000470076 SSBP3Q9BWW4 388 aaPredicted RBP14.67□□□□□ -0.06
COL7A1-208ENST00000470076 HCAR1Q9BXC0 346 aa14.67□□□□□ -0.06
COL7A1-208ENST00000470076 TMEM165Q9HC07 324 aa14.67□□□□□ -0.06
COL7A1-208ENST00000470076 MIOXQ9UGB7 285 aa14.67□□□□□ -0.06
COL7A1-208ENST00000470076 B9D1Q9UPM9 204 aa14.67□□□□□ -0.06
COL7A1-208ENST00000470076 LRRC30A6NM36 301 aa14.66□□□□□ -0.06
COL7A1-208ENST00000470076 ARPC3O15145 178 aa14.66□□□□□ -0.06
COL7A1-208ENST00000470076 RENP00797 406 aa14.66□□□□□ -0.06
COL7A1-208ENST00000470076 PPIAL4GP0DN37 164 aa14.66□□□□□ -0.06
COL7A1-208ENST00000470076 RPS2P15880 293 aaKnown RBP14.66□□□□□ -0.06
COL7A1-208ENST00000470076 SLC6A6P31641 620 aa14.66□□□□□ -0.06
COL7A1-208ENST00000470076 PAX8Q06710 450 aa14.66□□□□□ -0.06
COL7A1-208ENST00000470076 ECH1Q13011 328 aa14.66□□□□□ -0.06
COL7A1-208ENST00000470076 RFX4Q33E94 735 aa14.66□□□□□ -0.06
COL7A1-208ENST00000470076 SLC36A3Q495N2 470 aa14.66□□□□□ -0.06
COL7A1-208ENST00000470076 LEG1Q6P5S2 330 aa14.66□□□□□ -0.06
COL7A1-208ENST00000470076 CORO6Q6QEF8 472 aa14.66□□□□□ -0.06
COL7A1-208ENST00000470076 COLCA1Q6ZS62 124 aa14.66□□□□□ -0.06
COL7A1-208ENST00000470076 JAZF1Q86VZ6 243 aa14.66□□□□□ -0.06
COL7A1-208ENST00000470076 C1orf87Q8N0U7 546 aa14.66□□□□□ -0.06
COL7A1-208ENST00000470076 OR6V1Q8N148 313 aa14.66□□□□□ -0.06
COL7A1-208ENST00000470076 SLC26A10Q8NG04 563 aa14.66□□□□□ -0.06
COL7A1-208ENST00000470076 C1QTNF5Q9BXJ0 243 aa14.66□□□□□ -0.06
COL7A1-208ENST00000470076 OR52D1Q9H346 318 aa14.66□□□□□ -0.06
COL7A1-208ENST00000470076 GORASP2Q9H8Y8 452 aa14.66□□□□□ -0.06
COL7A1-208ENST00000470076 SRA1Q9HD15 236 aaKnown RBP14.66□□□□□ -0.06
COL7A1-208ENST00000470076 MED4Q9NPJ6 270 aa14.66□□□□□ -0.06
COL7A1-208ENST00000470076 ADA2Q9NZK5 511 aa14.66□□□□□ -0.06
COL7A1-208ENST00000470076 A0A1B0GWJ7 208 aa14.65□□□□□ -0.06
COL7A1-208ENST00000470076 DNAJC9-AS1A6NH13 148 aa14.65□□□□□ -0.06
COL7A1-208ENST00000470076 H0YL77 283 aa14.65□□□□□ -0.06
COL7A1-208ENST00000470076 MLNRO43193 412 aa14.65□□□□□ -0.06
COL7A1-208ENST00000470076 GADD45GO95257 159 aa14.65□□□□□ -0.06
COL7A1-208ENST00000470076 CYB5R3P00387 301 aaPredicted RBP14.65□□□□□ -0.06
COL7A1-208ENST00000470076 PRDX6P30041 224 aa14.65□□□□□ -0.06
COL7A1-208ENST00000470076 CD80P33681 288 aa14.65□□□□□ -0.06
COL7A1-208ENST00000470076 GNB2P62879 340 aa14.65□□□□□ -0.06
COL7A1-208ENST00000470076 PAX2Q02962 417 aa14.65□□□□□ -0.06
COL7A1-208ENST00000470076 RSPO1Q2MKA7 263 aaPredicted RBP14.65□□□□□ -0.06
COL7A1-208ENST00000470076 KRTAP27-1Q3LI81 207 aa14.65□□□□□ -0.06
COL7A1-208ENST00000470076 BTNL3Q6UXE8 466 aa14.65□□□□□ -0.06
COL7A1-208ENST00000470076 LRRN1Q6UXK5 716 aa14.65□□□□□ -0.06
COL7A1-208ENST00000470076 KLBQ86Z14 1044 aa14.65□□□□□ -0.06
COL7A1-208ENST00000470076 BCL6BQ8N143 479 aaPredicted RBP14.65□□□□□ -0.06
COL7A1-208ENST00000470076 BHLHE23Q8NDY6 225 aa14.65□□□□□ -0.06
COL7A1-208ENST00000470076 NEIL1Q96FI4 390 aaPredicted RBP14.65□□□□□ -0.06
COL7A1-208ENST00000470076 PYURFQ96I23 114 aa14.65□□□□□ -0.06
COL7A1-208ENST00000470076 PLEKHA8Q96JA3 519 aa14.65□□□□□ -0.06
COL7A1-208ENST00000470076 NMNAT3Q96T66 252 aa14.65□□□□□ -0.06
COL7A1-208ENST00000470076 ZNF747Q9BV97 191 aa14.65□□□□□ -0.06
COL7A1-208ENST00000470076 MYLK2Q9H1R3 596 aa14.65□□□□□ -0.06
COL7A1-208ENST00000470076 TMEM100Q9NV29 134 aa14.65□□□□□ -0.06
COL7A1-208ENST00000470076 MEGF8Q7Z7M0 2845 aa14.65□□□□□ -0.06
COL7A1-208ENST00000470076 F5H5P2 479 aa14.64□□□□□ -0.07
COL7A1-208ENST00000470076 ZNF205O95201 554 aa14.64□□□□□ -0.07
COL7A1-208ENST00000470076 HIST1H1CP16403 213 aaKnown RBP14.64□□□□□ -0.07
COL7A1-208ENST00000470076 FPR3P25089 353 aa14.64□□□□□ -0.07
COL7A1-208ENST00000470076 NOS3P29474 1203 aa14.64□□□□□ -0.07
COL7A1-208ENST00000470076 GATA4P43694 442 aa14.64□□□□□ -0.07
COL7A1-208ENST00000470076 BAMBIQ13145 260 aa14.64□□□□□ -0.07
COL7A1-208ENST00000470076 ZNF404Q494X3 552 aa14.64□□□□□ -0.07
COL7A1-208ENST00000470076 SLC18B1Q6NT16 456 aa14.64□□□□□ -0.07
COL7A1-208ENST00000470076 NLRC3Q7RTR2 1065 aa14.64□□□□□ -0.07
COL7A1-208ENST00000470076 ZBTB46Q86UZ6 589 aa14.64□□□□□ -0.07
COL7A1-208ENST00000470076 MOGAT3Q86VF5 341 aa14.64□□□□□ -0.07
COL7A1-208ENST00000470076 RNF148Q8N7C7 305 aa14.64□□□□□ -0.07
COL7A1-208ENST00000470076 OR52E2Q8NGJ4 325 aa14.64□□□□□ -0.07
COL7A1-208ENST00000470076 OR2AJ1Q8NGZ0 328 aa14.64□□□□□ -0.07
COL7A1-208ENST00000470076 OR4K13Q8NH42 304 aa14.64□□□□□ -0.07
COL7A1-208ENST00000470076 PITX2Q99697 317 aa14.64□□□□□ -0.07
COL7A1-208ENST00000470076 ATF6BQ99941 703 aa14.64□□□□□ -0.07
COL7A1-208ENST00000470076 TMEM246Q9BRR3 403 aa14.64□□□□□ -0.07
COL7A1-208ENST00000470076 IFT27Q9BW83 186 aa14.64□□□□□ -0.07
COL7A1-208ENST00000470076 CDADC1Q9BWV3 514 aa14.64□□□□□ -0.07
COL7A1-208ENST00000470076 MS4A7Q9GZW8 240 aaPredicted RBP14.64□□□□□ -0.07
COL7A1-208ENST00000470076 WDR76Q9H967 626 aa14.64□□□□□ -0.07
COL7A1-208ENST00000470076 RPRD1BQ9NQG5 326 aaKnown RBP14.64□□□□□ -0.07
COL7A1-208ENST00000470076 IGHV2-70DA0A0C4DH43 119 aa14.63□□□□□ -0.07
COL7A1-208ENST00000470076 F5H5K5 113 aa14.63□□□□□ -0.07
COL7A1-208ENST00000470076 IDH3BO43837 385 aa14.63□□□□□ -0.07
COL7A1-208ENST00000470076 OR10H3O60404 316 aa14.63□□□□□ -0.07
COL7A1-208ENST00000470076 SEMG1P04279 462 aa14.63□□□□□ -0.07
COL7A1-208ENST00000470076 ACSM4P0C7M7 580 aa14.63□□□□□ -0.07
COL7A1-208ENST00000470076 IFNGR2P38484 337 aa14.63□□□□□ -0.07
COL7A1-208ENST00000470076 MTNR1AP48039 350 aa14.63□□□□□ -0.07
COL7A1-208ENST00000470076 SPIBQ01892 262 aa14.63□□□□□ -0.07
COL7A1-208ENST00000470076 MALLQ13021 153 aa14.63□□□□□ -0.07
COL7A1-208ENST00000470076 GK2Q14410 553 aaPredicted RBP14.63□□□□□ -0.07
COL7A1-208ENST00000470076 SHISA2Q6UWI4 295 aa14.63□□□□□ -0.07
COL7A1-208ENST00000470076 CFAP77Q6ZQR2 320 aa14.63□□□□□ -0.07
COL7A1-208ENST00000470076 C9orf139Q6ZV77 190 aa14.63□□□□□ -0.07
COL7A1-208ENST00000470076 LINC00346Q8IVM7 164 aa14.63□□□□□ -0.07
COL7A1-208ENST00000470076 PARP8Q8N3A8 854 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms