RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 ADARB1P78563 741 aaKnown RBP10.26□□□□□ -0.77
VPS13D-204ENST00000469054 POU4F2Q12837 409 aa10.26□□□□□ -0.77
VPS13D-204ENST00000469054 ZNF718Q3SXZ3 478 aa10.26□□□□□ -0.77
VPS13D-204ENST00000469054 SPATA46Q5T0L3 261 aa10.26□□□□□ -0.77
VPS13D-204ENST00000469054 ZNF691Q5VV52 312 aa10.26□□□□□ -0.77
VPS13D-204ENST00000469054 MBNL2Q5VZF2 373 aaKnown RBP10.26□□□□□ -0.77
VPS13D-204ENST00000469054 COLCA1Q6ZS62 124 aa10.26□□□□□ -0.77
VPS13D-204ENST00000469054 SPATC1Q76KD6 591 aa10.26□□□□□ -0.77
VPS13D-204ENST00000469054 NAA40Q86UY6 237 aa10.26□□□□□ -0.77
VPS13D-204ENST00000469054 LRRC75A-AS1Q8N1F1 130 aa10.26□□□□□ -0.77
VPS13D-204ENST00000469054 OR51G2Q8NGK0 314 aa10.26□□□□□ -0.77
VPS13D-204ENST00000469054 OR5L1Q8NGL2 311 aa10.26□□□□□ -0.77
VPS13D-204ENST00000469054 APOBEC3DQ96AK3 386 aaPredicted RBP10.26□□□□□ -0.77
VPS13D-204ENST00000469054 TRMT61AQ96FX7 289 aaKnown RBP10.26□□□□□ -0.77
VPS13D-204ENST00000469054 ZNF799Q96GE5 643 aa10.26□□□□□ -0.77
VPS13D-204ENST00000469054 Q96MT0 163 aa10.26□□□□□ -0.77
VPS13D-204ENST00000469054 COG8Q96MW5 612 aa10.26□□□□□ -0.77
VPS13D-204ENST00000469054 MNTQ99583 582 aa10.26□□□□□ -0.77
VPS13D-204ENST00000469054 SYT3Q9BQG1 590 aa10.26□□□□□ -0.77
VPS13D-204ENST00000469054 ADI1Q9BV57 179 aa10.26□□□□□ -0.77
VPS13D-204ENST00000469054 C1QTNF5Q9BXJ0 243 aa10.26□□□□□ -0.77
VPS13D-204ENST00000469054 GSX2Q9BZM3 304 aa10.26□□□□□ -0.77
VPS13D-204ENST00000469054 HEATR1Q9H583 2144 aaKnown RBP10.26□□□□□ -0.77
VPS13D-204ENST00000469054 TUBG2Q9NRH3 451 aa10.26□□□□□ -0.77
VPS13D-204ENST00000469054 FBXO9Q9UK97 447 aaPredicted RBP10.26□□□□□ -0.77
VPS13D-204ENST00000469054 ITGB1BP2Q9UKP3 347 aa10.26□□□□□ -0.77
VPS13D-204ENST00000469054 KLHDC2Q9Y2U9 406 aa10.26□□□□□ -0.77
VPS13D-204ENST00000469054 STARD10Q9Y365 291 aa10.26□□□□□ -0.77
VPS13D-204ENST00000469054 TMEM14AQ9Y6G1 99 aa10.26□□□□□ -0.77
VPS13D-204ENST00000469054 CSMD2Q7Z408 3487 aa10.26□□□□□ -0.77
VPS13D-204ENST00000469054 RTTNQ86VV8 2226 aa10.26□□□□□ -0.77
VPS13D-204ENST00000469054 CENPEQ02224 2701 aa10.26□□□□□ -0.77
VPS13D-204ENST00000469054 RAI1Q7Z5J4 1906 aaPredicted RBP10.25□□□□□ -0.77
VPS13D-204ENST00000469054 H0YAE9 185 aa10.25□□□□□ -0.77
VPS13D-204ENST00000469054 H3BSA7 217 aa10.25□□□□□ -0.77
VPS13D-204ENST00000469054 CLIC3O95833 236 aa10.25□□□□□ -0.77
VPS13D-204ENST00000469054 CLPTM1O96005 669 aa10.25□□□□□ -0.77
VPS13D-204ENST00000469054 IGHV3-13P01766 116 aa10.25□□□□□ -0.77
VPS13D-204ENST00000469054 LCATP04180 440 aa10.25□□□□□ -0.77
VPS13D-204ENST00000469054 ATP6V1E1P36543 226 aa10.25□□□□□ -0.77
VPS13D-204ENST00000469054 CAPGP40121 348 aa10.25□□□□□ -0.77
VPS13D-204ENST00000469054 OPRL1P41146 370 aa10.25□□□□□ -0.77
VPS13D-204ENST00000469054 PRKXP51817 358 aa10.25□□□□□ -0.77
VPS13D-204ENST00000469054 ART1P52961 327 aa10.25□□□□□ -0.77
VPS13D-204ENST00000469054 KLF3P57682 345 aaPredicted RBP10.25□□□□□ -0.77
VPS13D-204ENST00000469054 DRAM2Q6UX65 266 aa10.25□□□□□ -0.77
VPS13D-204ENST00000469054 SLC35F2Q8IXU6 374 aa10.25□□□□□ -0.77
VPS13D-204ENST00000469054 KLF14Q8TD94 323 aaPredicted RBP10.25□□□□□ -0.77
VPS13D-204ENST00000469054 ASB17Q8WXJ9 295 aa10.25□□□□□ -0.77
VPS13D-204ENST00000469054 CLN6Q9NWW5 311 aa10.25□□□□□ -0.77
VPS13D-204ENST00000469054 SLCO1C1Q9NYB5 712 aa10.25□□□□□ -0.77
VPS13D-204ENST00000469054 MYEF2Q9P2K5 600 aaKnown RBP10.25□□□□□ -0.77
VPS13D-204ENST00000469054 COPS3Q9UNS2 423 aa10.25□□□□□ -0.77
VPS13D-204ENST00000469054 RRP15Q9Y3B9 282 aaKnown RBP10.25□□□□□ -0.77
VPS13D-204ENST00000469054 APCP25054 2843 aa10.25□□□□□ -0.77
VPS13D-204ENST00000469054 PLCE1Q9P212 2302 aa10.24□□□□□ -0.77
VPS13D-204ENST00000469054 NAV2Q8IVL1 2488 aa10.24□□□□□ -0.77
VPS13D-204ENST00000469054 A0A1W2PPW3 197 aa10.24□□□□□ -0.77
VPS13D-204ENST00000469054 H0YJX3 145 aa10.24□□□□□ -0.77
VPS13D-204ENST00000469054 H7C417 338 aa10.24□□□□□ -0.77
VPS13D-204ENST00000469054 PHYHO14832 338 aa10.24□□□□□ -0.77
VPS13D-204ENST00000469054 APOC1P02654 83 aa10.24□□□□□ -0.77
VPS13D-204ENST00000469054 H2BFMP0C1H6 154 aa10.24□□□□□ -0.77
VPS13D-204ENST00000469054 OR2T7P0C7T2 308 aa10.24□□□□□ -0.77
VPS13D-204ENST00000469054 HSD11B1P28845 292 aa10.24□□□□□ -0.77
VPS13D-204ENST00000469054 MPV17P39210 176 aa10.24□□□□□ -0.77
VPS13D-204ENST00000469054 MTNR1AP48039 350 aa10.24□□□□□ -0.77
VPS13D-204ENST00000469054 SLC6A9P48067 706 aa10.24□□□□□ -0.77
VPS13D-204ENST00000469054 PTH2RP49190 550 aa10.24□□□□□ -0.77
VPS13D-204ENST00000469054 ATP5J2P56134 94 aa10.24□□□□□ -0.77
VPS13D-204ENST00000469054 CXCR4P61073 352 aa10.24□□□□□ -0.77
VPS13D-204ENST00000469054 IL5RAQ01344 420 aa10.24□□□□□ -0.77
VPS13D-204ENST00000469054 IL18R1Q13478 541 aa10.24□□□□□ -0.77
VPS13D-204ENST00000469054 MAD2L1BPQ15013 274 aaPredicted RBP10.24□□□□□ -0.77
VPS13D-204ENST00000469054 MOGQ16653 247 aa10.24□□□□□ -0.77
VPS13D-204ENST00000469054 KCTD18Q6PI47 426 aaPredicted RBP10.24□□□□□ -0.77
VPS13D-204ENST00000469054 DEGS2Q6QHC5 323 aa10.24□□□□□ -0.77
VPS13D-204ENST00000469054 KRT77Q7Z794 578 aa10.24□□□□□ -0.77
VPS13D-204ENST00000469054 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.24□□□□□ -0.77
VPS13D-204ENST00000469054 ZNF283Q8N7M2 679 aa10.24□□□□□ -0.77
VPS13D-204ENST00000469054 SETD9Q8NE22 299 aa10.24□□□□□ -0.77
VPS13D-204ENST00000469054 OR2T27Q8NH04 317 aa10.24□□□□□ -0.77
VPS13D-204ENST00000469054 APH1BQ8WW43 257 aa10.24□□□□□ -0.77
VPS13D-204ENST00000469054 TFAP2CQ92754 450 aa10.24□□□□□ -0.77
VPS13D-204ENST00000469054 CMBLQ96DG6 245 aa10.24□□□□□ -0.77
VPS13D-204ENST00000469054 RNFT2Q96EX2 444 aa10.24□□□□□ -0.77
VPS13D-204ENST00000469054 PERPQ96FX8 193 aa10.24□□□□□ -0.77
VPS13D-204ENST00000469054 MROQ9BYG7 248 aa10.24□□□□□ -0.77
VPS13D-204ENST00000469054 CXXC4Q9H2H0 198 aa10.24□□□□□ -0.77
VPS13D-204ENST00000469054 VCX3BQ9H321 246 aa10.24□□□□□ -0.77
VPS13D-204ENST00000469054 MS4A5Q9H3V2 200 aa10.24□□□□□ -0.77
VPS13D-204ENST00000469054 POFUT1Q9H488 388 aa10.24□□□□□ -0.77
VPS13D-204ENST00000469054 DYNLRB1Q9NP97 96 aa10.24□□□□□ -0.77
VPS13D-204ENST00000469054 TAAR3PQ9P1P4 343 aa10.24□□□□□ -0.77
VPS13D-204ENST00000469054 GPR160Q9UJ42 338 aa10.24□□□□□ -0.77
VPS13D-204ENST00000469054 HSPE1-MOB4S4R3N1 261 aa10.24□□□□□ -0.77
VPS13D-204ENST00000469054 SETXQ7Z333 2677 aaKnown RBP10.24□□□□□ -0.77
VPS13D-204ENST00000469054 POLQO75417 2590 aa10.23□□□□□ -0.77
VPS13D-204ENST00000469054 ITPR2Q14571 2701 aa10.23□□□□□ -0.77
VPS13D-204ENST00000469054 PRR32B1ATL7 298 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms