RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 HIST2H3PS2Q5TEC6 136 aa18.35■□□□□ 0.53
TTC28-204ENST00000468807 SLC27A4Q6P1M0 643 aa18.35■□□□□ 0.53
TTC28-204ENST00000468807 PGBD2Q6P3X8 592 aa18.35■□□□□ 0.53
TTC28-204ENST00000468807 ZNF620Q6ZNG0 422 aa18.35■□□□□ 0.53
TTC28-204ENST00000468807 HIST2H3AQ71DI3 136 aa18.35■□□□□ 0.53
TTC28-204ENST00000468807 OR8G5Q8NG78 346 aa18.35■□□□□ 0.53
TTC28-204ENST00000468807 OR52L1Q8NGH7 329 aa18.35■□□□□ 0.53
TTC28-204ENST00000468807 OR13G1Q8NGZ3 307 aa18.35■□□□□ 0.53
TTC28-204ENST00000468807 ZNF420Q8TAQ5 688 aaPredicted RBP18.35■□□□□ 0.53
TTC28-204ENST00000468807 SLC6A7Q99884 636 aa18.35■□□□□ 0.53
TTC28-204ENST00000468807 HCAR1Q9BXC0 346 aa18.35■□□□□ 0.53
TTC28-204ENST00000468807 H0YL77 283 aa18.34■□□□□ 0.53
TTC28-204ENST00000468807 MMP16P51512 607 aa18.34■□□□□ 0.53
TTC28-204ENST00000468807 PRSS12P56730 875 aa18.34■□□□□ 0.53
TTC28-204ENST00000468807 SEC61A1P61619 476 aaKnown RBP18.34■□□□□ 0.53
TTC28-204ENST00000468807 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.34■□□□□ 0.53
TTC28-204ENST00000468807 TMEM155Q4W5P6 130 aa18.34■□□□□ 0.53
TTC28-204ENST00000468807 SLC18B1Q6NT16 456 aa18.34■□□□□ 0.53
TTC28-204ENST00000468807 ZFAND2BQ8WV99 257 aa18.34■□□□□ 0.53
TTC28-204ENST00000468807 C22orf15Q8WYQ4 148 aa18.34■□□□□ 0.53
TTC28-204ENST00000468807 MEGF10Q96KG7 1140 aa18.34■□□□□ 0.53
TTC28-204ENST00000468807 SIGLEC11Q96RL6 698 aa18.34■□□□□ 0.53
TTC28-204ENST00000468807 ATF6BQ99941 703 aa18.34■□□□□ 0.53
TTC28-204ENST00000468807 SUCNR1Q9BXA5 334 aa18.34■□□□□ 0.53
TTC28-204ENST00000468807 PATZ1Q9HBE1 687 aaKnown RBP18.34■□□□□ 0.53
TTC28-204ENST00000468807 GCM1Q9NP62 436 aa18.34■□□□□ 0.53
TTC28-204ENST00000468807 MMP26Q9NRE1 261 aa18.34■□□□□ 0.53
TTC28-204ENST00000468807 TMEM178BH3BS89 294 aa18.33■□□□□ 0.52
TTC28-204ENST00000468807 TRIM77I1YAP6 450 aa18.33■□□□□ 0.52
TTC28-204ENST00000468807 TNFRSF11BO00300 401 aa18.33■□□□□ 0.52
TTC28-204ENST00000468807 IDH3BO43837 385 aa18.33■□□□□ 0.52
TTC28-204ENST00000468807 ZNF205O95201 554 aa18.33■□□□□ 0.52
TTC28-204ENST00000468807 SRP9P49458 86 aaKnown RBP18.33■□□□□ 0.52
TTC28-204ENST00000468807 HILS1P60008 231 aa18.33■□□□□ 0.52
TTC28-204ENST00000468807 ZBTB46Q86UZ6 589 aa18.33■□□□□ 0.52
TTC28-204ENST00000468807 LRRC28Q86X40 367 aaPredicted RBP18.33■□□□□ 0.52
TTC28-204ENST00000468807 PROKR2Q8NFJ6 384 aa18.33■□□□□ 0.52
TTC28-204ENST00000468807 OR9Q2Q8NGE9 314 aa18.33■□□□□ 0.52
TTC28-204ENST00000468807 JMJD8Q96S16 334 aa18.33■□□□□ 0.52
TTC28-204ENST00000468807 OPN4Q9UHM6 478 aa18.33■□□□□ 0.52
TTC28-204ENST00000468807 F5H5P2 479 aa18.32■□□□□ 0.52
TTC28-204ENST00000468807 KRT36O76013 467 aa18.32■□□□□ 0.52
TTC28-204ENST00000468807 CYB5R3P00387 301 aaPredicted RBP18.32■□□□□ 0.52
TTC28-204ENST00000468807 LCATP04180 440 aa18.32■□□□□ 0.52
TTC28-204ENST00000468807 ACSM4P0C7M7 580 aa18.32■□□□□ 0.52
TTC28-204ENST00000468807 ZNF823P16415 610 aa18.32■□□□□ 0.52
TTC28-204ENST00000468807 PYCR1P32322 319 aa18.32■□□□□ 0.52
TTC28-204ENST00000468807 MDH2P40926 338 aaKnown RBP18.32■□□□□ 0.52
TTC28-204ENST00000468807 ECH1Q13011 328 aa18.32■□□□□ 0.52
TTC28-204ENST00000468807 MALLQ13021 153 aa18.32■□□□□ 0.52
TTC28-204ENST00000468807 USP43Q70EL4 1123 aa18.32■□□□□ 0.52
TTC28-204ENST00000468807 PIGWQ7Z7B1 504 aa18.32■□□□□ 0.52
TTC28-204ENST00000468807 MOGAT3Q86VF5 341 aa18.32■□□□□ 0.52
TTC28-204ENST00000468807 MUC20Q8N307 709 aaPredicted RBP18.32■□□□□ 0.52
TTC28-204ENST00000468807 CYB561A3Q8NBI2 242 aa18.32■□□□□ 0.52
TTC28-204ENST00000468807 C1QTNF5Q9BXJ0 243 aa18.32■□□□□ 0.52
TTC28-204ENST00000468807 TMEM100Q9NV29 134 aa18.32■□□□□ 0.52
TTC28-204ENST00000468807 CDH10Q9Y6N8 788 aa18.32■□□□□ 0.52
TTC28-204ENST00000468807 IQCF6A8MYZ5 107 aa18.31■□□□□ 0.52
TTC28-204ENST00000468807 MLNRO43193 412 aa18.31■□□□□ 0.52
TTC28-204ENST00000468807 HLA-DPB1P04440 258 aa18.31■□□□□ 0.52
TTC28-204ENST00000468807 SELEP16581 610 aa18.31■□□□□ 0.52
TTC28-204ENST00000468807 ATP6V1B2P21281 511 aa18.31■□□□□ 0.52
TTC28-204ENST00000468807 GGT2P36268 569 aa18.31■□□□□ 0.52
TTC28-204ENST00000468807 RPS27P42677 84 aaKnown RBP18.31■□□□□ 0.52
TTC28-204ENST00000468807 SLC6A9P48067 706 aa18.31■□□□□ 0.52
TTC28-204ENST00000468807 TRAP1Q12931 704 aaKnown RBP18.31■□□□□ 0.52
TTC28-204ENST00000468807 RSPO1Q2MKA7 263 aaPredicted RBP18.31■□□□□ 0.52
TTC28-204ENST00000468807 ESCO2Q56NI9 601 aa18.31■□□□□ 0.52
TTC28-204ENST00000468807 ARMCX4Q5H9R4 360 aa18.31■□□□□ 0.52
TTC28-204ENST00000468807 NAA40Q86UY6 237 aa18.31■□□□□ 0.52
TTC28-204ENST00000468807 SLC30A2Q9BRI3 323 aa18.31■□□□□ 0.52
TTC28-204ENST00000468807 TBC1D23Q9NUY8 699 aa18.31■□□□□ 0.52
TTC28-204ENST00000468807 MRPL22Q9NWU5 206 aaKnown RBP18.31■□□□□ 0.52
TTC28-204ENST00000468807 OR5V1Q9UGF6 321 aa18.31■□□□□ 0.52
TTC28-204ENST00000468807 CYB5R1Q9UHQ9 305 aa18.31■□□□□ 0.52
TTC28-204ENST00000468807 LYVE1Q9Y5Y7 322 aa18.31■□□□□ 0.52
TTC28-204ENST00000468807 PPIAL4EA0A075B759 164 aa18.3■□□□□ 0.52
TTC28-204ENST00000468807 PPIAL4CA0A0B4J2A2 164 aa18.3■□□□□ 0.52
TTC28-204ENST00000468807 TVP23AA6NH52 213 aa18.3■□□□□ 0.52
TTC28-204ENST00000468807 CEACAM18A8MTB9 384 aa18.3■□□□□ 0.52
TTC28-204ENST00000468807 PPIAL4DF5H284 164 aa18.3■□□□□ 0.52
TTC28-204ENST00000468807 TRAPPC2LH3BP13 241 aa18.3■□□□□ 0.52
TTC28-204ENST00000468807 IFNL4K9M1U5 179 aa18.3■□□□□ 0.52
TTC28-204ENST00000468807 CCNB2O95067 398 aa18.3■□□□□ 0.52
TTC28-204ENST00000468807 PPIAL4FP0DN26 164 aa18.3■□□□□ 0.52
TTC28-204ENST00000468807 FPR2P25090 351 aa18.3■□□□□ 0.52
TTC28-204ENST00000468807 MNAT1P51948 309 aa18.3■□□□□ 0.52
TTC28-204ENST00000468807 PPP1R8Q12972 351 aaKnown RBP18.3■□□□□ 0.52
TTC28-204ENST00000468807 GK2Q14410 553 aaPredicted RBP18.3■□□□□ 0.52
TTC28-204ENST00000468807 SPATS1Q496A3 300 aa18.3■□□□□ 0.52
TTC28-204ENST00000468807 RPL13AP3Q6NVV1 102 aa18.3■□□□□ 0.52
TTC28-204ENST00000468807 OR51L1Q8NGJ5 315 aa18.3■□□□□ 0.52
TTC28-204ENST00000468807 GCDHQ92947 438 aaPredicted RBP18.3■□□□□ 0.52
TTC28-204ENST00000468807 SLCO4A1Q96BD0 722 aa18.3■□□□□ 0.52
TTC28-204ENST00000468807 BTBD10Q9BSF8 475 aa18.3■□□□□ 0.52
TTC28-204ENST00000468807 MRI1Q9BV20 369 aa18.3■□□□□ 0.52
TTC28-204ENST00000468807 AUP1Q9Y679 476 aa18.3■□□□□ 0.52
TTC28-204ENST00000468807 LRRC30A6NM36 301 aa18.29■□□□□ 0.52
TTC28-204ENST00000468807 B2RBV5 119 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms