RNA–Protein interactions for RNA: ENST00000468792.1

COL6A3-208, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 329 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-208ENST00000468792 OR6N1Q8NGY5 312 aa6.73□□□□□ -1.33
COL6A3-208ENST00000468792 OR56B4Q8NH76 319 aa6.73□□□□□ -1.33
COL6A3-208ENST00000468792 OR14L1PQ8NHC6 308 aa6.73□□□□□ -1.33
COL6A3-208ENST00000468792 CPT1CQ8TCG5 803 aa6.73□□□□□ -1.33
COL6A3-208ENST00000468792 NKD1Q969G9 470 aa6.73□□□□□ -1.33
COL6A3-208ENST00000468792 NABP1Q96AH0 204 aa6.73□□□□□ -1.33
COL6A3-208ENST00000468792 UPRTQ96BW1 309 aa6.73□□□□□ -1.33
COL6A3-208ENST00000468792 ORAI1Q96D31 301 aa6.73□□□□□ -1.33
COL6A3-208ENST00000468792 SCMH1Q96GD3 660 aa6.73□□□□□ -1.33
COL6A3-208ENST00000468792 MED30Q96HR3 178 aa6.73□□□□□ -1.33
COL6A3-208ENST00000468792 SFXN2Q96NB2 322 aa6.73□□□□□ -1.33
COL6A3-208ENST00000468792 ZFP3Q96NJ6 502 aa6.73□□□□□ -1.33
COL6A3-208ENST00000468792 FOXN4Q96NZ1 517 aa6.73□□□□□ -1.33
COL6A3-208ENST00000468792 SORCS2Q96PQ0 1159 aa6.73□□□□□ -1.33
COL6A3-208ENST00000468792 METTL17Q9H7H0 456 aaPredicted RBP6.73□□□□□ -1.33
COL6A3-208ENST00000468792 SEC61A2Q9H9S3 476 aa6.73□□□□□ -1.33
COL6A3-208ENST00000468792 TMEM138Q9NPI0 162 aa6.73□□□□□ -1.33
COL6A3-208ENST00000468792 CENPMQ9NSP4 180 aa6.73□□□□□ -1.33
COL6A3-208ENST00000468792 DEPPQ9NTK1 212 aa6.73□□□□□ -1.33
COL6A3-208ENST00000468792 MTFP1Q9UDX5 166 aa6.73□□□□□ -1.33
COL6A3-208ENST00000468792 ZNF391Q9UJN7 358 aa6.73□□□□□ -1.33
COL6A3-208ENST00000468792 RHBDD3Q9Y3P4 386 aa6.73□□□□□ -1.33
COL6A3-208ENST00000468792 PCSK5Q92824 1860 aa6.73□□□□□ -1.33
COL6A3-208ENST00000468792 DOCK10Q96BY6 2186 aa6.72□□□□□ -1.33
COL6A3-208ENST00000468792 A0A1B0GVI7 797 aa6.72□□□□□ -1.33
COL6A3-208ENST00000468792 LINC00854A0A1B0GVQ3 168 aa6.72□□□□□ -1.33
COL6A3-208ENST00000468792 PMS2P1A4D2B8 440 aa6.72□□□□□ -1.33
COL6A3-208ENST00000468792 CDRT15L2A8MXV6 281 aa6.72□□□□□ -1.33
COL6A3-208ENST00000468792 TNFSF11O14788 317 aa6.72□□□□□ -1.33
COL6A3-208ENST00000468792 TFECO14948 347 aaPredicted RBP6.72□□□□□ -1.33
COL6A3-208ENST00000468792 DOK2O60496 412 aa6.72□□□□□ -1.33
COL6A3-208ENST00000468792 PRAF2O60831 178 aa6.72□□□□□ -1.33
COL6A3-208ENST00000468792 BPNT1O95861 308 aa6.72□□□□□ -1.33
COL6A3-208ENST00000468792 OPN1LWP04000 364 aa6.72□□□□□ -1.33
COL6A3-208ENST00000468792 MELTFP08582 738 aa6.72□□□□□ -1.33
COL6A3-208ENST00000468792 ADRB1P08588 477 aa6.72□□□□□ -1.33
COL6A3-208ENST00000468792 CD3GP09693 182 aa6.72□□□□□ -1.33
COL6A3-208ENST00000468792 ARSBP15848 533 aa6.72□□□□□ -1.33
COL6A3-208ENST00000468792 BDKRB2P30411 391 aa6.72□□□□□ -1.33
COL6A3-208ENST00000468792 FAUP35544 74 aaKnown RBP6.72□□□□□ -1.33
COL6A3-208ENST00000468792 ALDH3B1P43353 468 aa6.72□□□□□ -1.33
COL6A3-208ENST00000468792 POU3F4P49335 361 aa6.72□□□□□ -1.33
COL6A3-208ENST00000468792 CLDN6P56747 220 aa6.72□□□□□ -1.33
COL6A3-208ENST00000468792 RRAS2P62070 204 aaPredicted RBP6.72□□□□□ -1.33
COL6A3-208ENST00000468792 CD300CQ08708 224 aa6.72□□□□□ -1.33
COL6A3-208ENST00000468792 ENDOGQ14249 297 aaKnown RBP6.72□□□□□ -1.33
COL6A3-208ENST00000468792 KRTAP27-1Q3LI81 207 aa6.72□□□□□ -1.33
COL6A3-208ENST00000468792 CORO6Q6QEF8 472 aa6.72□□□□□ -1.33
COL6A3-208ENST00000468792 DHRS13Q6UX07 377 aa6.72□□□□□ -1.33
COL6A3-208ENST00000468792 KRT74Q7RTS7 529 aa6.72□□□□□ -1.33
COL6A3-208ENST00000468792 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.72□□□□□ -1.33
COL6A3-208ENST00000468792 ADGRE4PQ86SQ3 457 aa6.72□□□□□ -1.33
COL6A3-208ENST00000468792 GPR137CQ8N3F9 429 aa6.72□□□□□ -1.33
COL6A3-208ENST00000468792 SLC22A24Q8N4F4 322 aa6.72□□□□□ -1.33
COL6A3-208ENST00000468792 DNAAF1Q8NEP3 725 aa6.72□□□□□ -1.33
COL6A3-208ENST00000468792 OR2M7Q8NG81 312 aa6.72□□□□□ -1.33
COL6A3-208ENST00000468792 OR51D1Q8NGF3 324 aa6.72□□□□□ -1.33
COL6A3-208ENST00000468792 OR52I2Q8NH67 350 aa6.72□□□□□ -1.33
COL6A3-208ENST00000468792 PPP1R14AQ96A00 147 aa6.72□□□□□ -1.33
COL6A3-208ENST00000468792 JSRP1Q96MG2 331 aaPredicted RBP6.72□□□□□ -1.33
COL6A3-208ENST00000468792 ZNF385AQ96PM9 386 aaKnown RBP6.72□□□□□ -1.33
COL6A3-208ENST00000468792 UCN2Q96RP3 112 aa6.72□□□□□ -1.33
COL6A3-208ENST00000468792 PRRX2Q99811 253 aa6.72□□□□□ -1.33
COL6A3-208ENST00000468792 ZNF416Q9BWM5 594 aa6.72□□□□□ -1.33
COL6A3-208ENST00000468792 CACNG6Q9BXT2 260 aa6.72□□□□□ -1.33
COL6A3-208ENST00000468792 SRXN1Q9BYN0 137 aa6.72□□□□□ -1.33
COL6A3-208ENST00000468792 LINC00470Q9BZP3 86 aa6.72□□□□□ -1.33
COL6A3-208ENST00000468792 GHITMQ9H3K2 345 aa6.72□□□□□ -1.33
COL6A3-208ENST00000468792 ZNF703Q9H7S9 590 aaPredicted RBP6.72□□□□□ -1.33
COL6A3-208ENST00000468792 EMC7Q9NPA0 242 aa6.72□□□□□ -1.33
COL6A3-208ENST00000468792 ACKR4Q9NPB9 350 aa6.72□□□□□ -1.33
COL6A3-208ENST00000468792 TAS2R4Q9NYW5 299 aa6.72□□□□□ -1.33
COL6A3-208ENST00000468792 ASH2LQ9UBL3 628 aa6.72□□□□□ -1.33
COL6A3-208ENST00000468792 GHRLQ9UBU3 117 aa6.72□□□□□ -1.33
COL6A3-208ENST00000468792 ATPIF1Q9UII2 106 aa6.72□□□□□ -1.33
COL6A3-208ENST00000468792 RAB22AQ9UL26 194 aa6.72□□□□□ -1.33
COL6A3-208ENST00000468792 PAIP2BQ9ULR5 123 aaKnown RBP6.72□□□□□ -1.33
COL6A3-208ENST00000468792 SLC5A6Q9Y289 635 aa6.72□□□□□ -1.33
COL6A3-208ENST00000468792 MRPS7Q9Y2R9 242 aaKnown RBP6.72□□□□□ -1.33
COL6A3-208ENST00000468792 POLR1DQ9Y2S0 133 aa6.72□□□□□ -1.33
COL6A3-208ENST00000468792 KLF13Q9Y2Y9 288 aaPredicted RBP6.72□□□□□ -1.33
COL6A3-208ENST00000468792 ALG5Q9Y673 324 aa6.72□□□□□ -1.33
COL6A3-208ENST00000468792 ZNF318Q5VUA4 2279 aa6.72□□□□□ -1.33
COL6A3-208ENST00000468792 OTOGLQ3ZCN5 2332 aa6.72□□□□□ -1.33
COL6A3-208ENST00000468792 KIAA1549Q9HCM3 1950 aa6.71□□□□□ -1.33
COL6A3-208ENST00000468792 A0A0G2JMM0 328 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 TMEM272A0A1B0GTI8 110 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 A0A1B0GVC2 190 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 A0A1W2PPB8 328 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 A0A1W2PRS3 328 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 METTL21EPA6NDL7 271 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 A6NIN4 97 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 ZNF724A8MTY0 619 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 KIR3DP1A8MWS1 328 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 PRR33A8MZF0 331 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 H0YC42 278 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 KLRC4-KLRK1H3BQV0 150 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 RPL36A-HNRNPH2H7BZ11 118 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 P2RY10O00398 339 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 EIF1AYO14602 144 aaKnown RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms