RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 DBTP11182 482 aaKnown RBP3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 FCGR2AP12318 317 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 BMP5P22003 454 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 CRHBPP24387 322 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 LAP3P28838 519 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 CRABP1P29762 137 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 C21orf33P30042 268 aaPredicted RBP3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 AGTR1P30556 359 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 HTR1FP30939 366 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 PTGER4P35408 488 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 CAPZA2P47755 286 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 MTNR1AP48039 350 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 ZNF84P51523 738 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 SLC25A1P53007 311 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 ELLP55199 621 aaPredicted RBP3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 FOXG1P55316 489 aaPredicted RBP3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 CXCR4P61073 352 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 CSNK2BP67870 215 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 ARF1P84077 181 aaKnown RBP3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 ROR2Q01974 943 aaKnown RBP3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 ZNF91Q05481 1191 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 TSC22D1Q15714 1073 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 NEDD8Q15843 81 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 EIF2S3LQ2VIR3 472 aaKnown RBP3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 CEACAM16Q2WEN9 425 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 RNASE12Q5GAN4 147 aaKnown RBP3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 SLC35D3Q5M8T2 416 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 FAM205BPQ63HN1 556 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 NSUN5P2Q63ZY6 315 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 OR2A2Q6IF42 318 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 CORO6Q6QEF8 472 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 KCTD8Q6ZWB6 473 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 LINGO2Q7L985 606 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 HDDC2Q7Z4H3 204 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 LUZP2Q86TE4 346 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 ADCK1Q86TW2 530 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 LINC00346Q8IVM7 164 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 SLC35F2Q8IXU6 374 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 BOLLQ8N9W6 283 aaKnown RBP3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 ST6GALNAC3Q8NDV1 305 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 NOXO1Q8NFA2 376 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 TSPAN14Q8NG11 270 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 OR52I1Q8NGK6 324 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 OR6N2Q8NGY6 317 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 C11orf40Q8WZ69 217 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 APH1AQ96BI3 265 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 WBP1Q96G27 269 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 GMPPAQ96IJ6 420 aaPredicted RBP3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 ALKBH3Q96Q83 286 aaPredicted RBP3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 SNX18Q96RF0 628 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 SH3GL3Q99963 347 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 SLX1AQ9BQ83 275 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 TTYH2Q9BSA4 534 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 MRPL13Q9BYD1 178 aaKnown RBP3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 YTHDF1Q9BYJ9 559 aaKnown RBP3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 NMNAT2Q9BZQ4 307 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 ZNF407Q9C0G0 2248 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 OPN3Q9H1Y3 402 aaPredicted RBP3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 SLCO5A1Q9H2Y9 848 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 TP63Q9H3D4 680 aaPredicted RBP3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 RNF121Q9H920 327 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 WDR76Q9H967 626 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 RNF122Q9H9V4 155 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 CRLF2Q9HC73 371 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 FANCFQ9NPI8 374 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 GLRX2Q9NS18 164 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 SLC7A10Q9NS82 523 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 CENPMQ9NSP4 180 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 PLCXD1Q9NUJ7 323 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 PAK1IP1Q9NWT1 392 aaPredicted RBP3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 TAS2R16Q9NYV7 291 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 CLCF1Q9UBD9 225 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 MGAT4CQ9UBM8 478 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 WARS2Q9UGM6 360 aaKnown RBP3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 CLEC2DQ9UHP7 191 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 PSORS1C1Q9UIG5 152 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 RALYQ9UKM9 306 aaKnown RBP3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 BLOC1S6Q9UL45 172 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 PTPRQQ9UMZ3 2332 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 PROCRQ9UNN8 238 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 MOKQ9UQ07 419 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 POLR1DQ9Y2S0 133 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 FAM215AQ9Y5M1 114 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 N6AMT1Q9Y5N5 214 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 FKBP7Q9Y680 259 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 CELSR3Q9NYQ7 3312 aa3.57□□□□□ -1.84
TMEM39A-204ENST00000468545 IGKV3D-15A0A087WSY6 115 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 A0A087WXM4 84 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 IGLV1-36A0A0B4J1U3 117 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 A0A1W2PR80 420 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 IRGMA1A4Y4 181 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 C12orf71A8MTZ7 269 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 EEF1E1-BLOC1S5C9J1V9 151 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 ZNF587BE7ETH6 402 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 H7C1Q1 480 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 J3QLW9 94 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 OVOL3O00110 214 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 MYL12BO14950 172 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 EEF1E1O43324 174 aaKnown RBP3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 AHCYL1O43865 530 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms