RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 APOFQ13790 326 aa17.12■□□□□ 0.33
NPHP4-206ENST00000468253 NXNL2Q5VZ03 156 aa17.12■□□□□ 0.33
NPHP4-206ENST00000468253 DRAM2Q6UX65 266 aa17.12■□□□□ 0.33
NPHP4-206ENST00000468253 FBXW12Q6X9E4 464 aa17.12■□□□□ 0.33
NPHP4-206ENST00000468253 ZBTB49Q6ZSB9 765 aa17.12■□□□□ 0.33
NPHP4-206ENST00000468253 MEPCEQ7L2J0 689 aaKnown RBP17.12■□□□□ 0.33
NPHP4-206ENST00000468253 ZCCHC24Q8N2G6 241 aaKnown RBP17.12■□□□□ 0.33
NPHP4-206ENST00000468253 OTOSQ8NHW6 89 aa17.12■□□□□ 0.33
NPHP4-206ENST00000468253 SNX33Q8WV41 574 aa17.12■□□□□ 0.33
NPHP4-206ENST00000468253 RNF133Q8WVZ7 376 aa17.12■□□□□ 0.33
NPHP4-206ENST00000468253 SLAMF6Q96DU3 332 aa17.12■□□□□ 0.33
NPHP4-206ENST00000468253 KCNJ15Q99712 375 aa17.12■□□□□ 0.33
NPHP4-206ENST00000468253 YIPF3Q9GZM5 350 aa17.12■□□□□ 0.33
NPHP4-206ENST00000468253 TOR3AQ9H497 397 aa17.12■□□□□ 0.33
NPHP4-206ENST00000468253 HAO2Q9NYQ3 351 aa17.12■□□□□ 0.33
NPHP4-206ENST00000468253 TEP1Q99973 2627 aaKnown RBP17.12■□□□□ 0.33
NPHP4-206ENST00000468253 LOC390937A0A1W2PQ73 354 aa17.11■□□□□ 0.33
NPHP4-206ENST00000468253 EI24O14681 340 aa17.11■□□□□ 0.33
NPHP4-206ENST00000468253 BAG2O95816 211 aa17.11■□□□□ 0.33
NPHP4-206ENST00000468253 APOC1P02654 83 aa17.11■□□□□ 0.33
NPHP4-206ENST00000468253 ADH4P08319 380 aa17.11■□□□□ 0.33
NPHP4-206ENST00000468253 PSKH1P11801 424 aa17.11■□□□□ 0.33
NPHP4-206ENST00000468253 PDLIM4P50479 330 aa17.11■□□□□ 0.33
NPHP4-206ENST00000468253 MMP15P51511 669 aa17.11■□□□□ 0.33
NPHP4-206ENST00000468253 GRB2P62993 217 aaKnown RBP17.11■□□□□ 0.33
NPHP4-206ENST00000468253 FAM209AQ5JX71 171 aa17.11■□□□□ 0.33
NPHP4-206ENST00000468253 SPATA46Q5T0L3 261 aa17.11■□□□□ 0.33
NPHP4-206ENST00000468253 LCN1P1Q5VSP4 162 aa17.11■□□□□ 0.33
NPHP4-206ENST00000468253 ZNF786Q8N393 782 aa17.11■□□□□ 0.33
NPHP4-206ENST00000468253 ZNF540Q8NDQ6 660 aa17.11■□□□□ 0.33
NPHP4-206ENST00000468253 BBS1Q8NFJ9 593 aa17.11■□□□□ 0.33
NPHP4-206ENST00000468253 OR8J1Q8NGP2 316 aa17.11■□□□□ 0.33
NPHP4-206ENST00000468253 OR6N2Q8NGY6 317 aa17.11■□□□□ 0.33
NPHP4-206ENST00000468253 CMBLQ96DG6 245 aa17.11■□□□□ 0.33
NPHP4-206ENST00000468253 HRASLS5Q96KN8 279 aa17.11■□□□□ 0.33
NPHP4-206ENST00000468253 ABHD6Q9BV23 337 aa17.11■□□□□ 0.33
NPHP4-206ENST00000468253 REG4Q9BYZ8 158 aa17.11■□□□□ 0.33
NPHP4-206ENST00000468253 RIBC2Q9H4K1 309 aa17.11■□□□□ 0.33
NPHP4-206ENST00000468253 CENPMQ9NSP4 180 aa17.11■□□□□ 0.33
NPHP4-206ENST00000468253 TRIM64A6NGJ6 449 aa17.1■□□□□ 0.33
NPHP4-206ENST00000468253 TRIM64BA6NI03 449 aa17.1■□□□□ 0.33
NPHP4-206ENST00000468253 ZNF878C9JN71 531 aa17.1■□□□□ 0.33
NPHP4-206ENST00000468253 M0R135 149 aa17.1■□□□□ 0.33
NPHP4-206ENST00000468253 ALOX5APP20292 161 aa17.1■□□□□ 0.33
NPHP4-206ENST00000468253 CDC42P60953 191 aa17.1■□□□□ 0.33
NPHP4-206ENST00000468253 RPS7P62081 194 aaKnown RBP17.1■□□□□ 0.33
NPHP4-206ENST00000468253 EIF2B1Q14232 305 aaKnown RBP17.1■□□□□ 0.33
NPHP4-206ENST00000468253 MAD2L1BPQ15013 274 aaPredicted RBP17.1■□□□□ 0.33
NPHP4-206ENST00000468253 TAF13Q15543 124 aa17.1■□□□□ 0.33
NPHP4-206ENST00000468253 SLC16A9Q7RTY1 509 aa17.1■□□□□ 0.33
NPHP4-206ENST00000468253 C10orf105Q8TEF2 133 aa17.1■□□□□ 0.33
NPHP4-206ENST00000468253 UBASH3BQ8TF42 649 aa17.1■□□□□ 0.33
NPHP4-206ENST00000468253 FAM168AQ92567 244 aa17.1■□□□□ 0.33
NPHP4-206ENST00000468253 ZNF799Q96GE5 643 aa17.1■□□□□ 0.33
NPHP4-206ENST00000468253 COX4I2Q96KJ9 171 aa17.1■□□□□ 0.33
NPHP4-206ENST00000468253 DIRC2Q96SL1 478 aa17.1■□□□□ 0.33
NPHP4-206ENST00000468253 SLC29A1Q99808 456 aa17.1■□□□□ 0.33
NPHP4-206ENST00000468253 SP140LQ9H930 580 aa17.1■□□□□ 0.33
NPHP4-206ENST00000468253 PURGQ9UJV8 347 aaKnown RBP17.1■□□□□ 0.33
NPHP4-206ENST00000468253 ZDHHC8Q9ULC8 765 aa17.1■□□□□ 0.33
NPHP4-206ENST00000468253 PLSCR5A0PG75 271 aa17.09■□□□□ 0.33
NPHP4-206ENST00000468253 CCDC182A6NF36 153 aa17.09■□□□□ 0.33
NPHP4-206ENST00000468253 SLC22A31A6NKX4 558 aa17.09■□□□□ 0.33
NPHP4-206ENST00000468253 LCATP04180 440 aa17.09■□□□□ 0.33
NPHP4-206ENST00000468253 INHBBP09529 407 aa17.09■□□□□ 0.33
NPHP4-206ENST00000468253 NAT2P11245 290 aa17.09■□□□□ 0.33
NPHP4-206ENST00000468253 DAOP14920 347 aa17.09■□□□□ 0.33
NPHP4-206ENST00000468253 SLC25A16P16260 332 aa17.09■□□□□ 0.33
NPHP4-206ENST00000468253 ZNF81P51508 661 aa17.09■□□□□ 0.33
NPHP4-206ENST00000468253 MALLQ13021 153 aa17.09■□□□□ 0.33
NPHP4-206ENST00000468253 TMED1Q13445 227 aa17.09■□□□□ 0.33
NPHP4-206ENST00000468253 GGTLC2Q14390 218 aa17.09■□□□□ 0.33
NPHP4-206ENST00000468253 ZMAT1Q5H9K5 638 aa17.09■□□□□ 0.33
NPHP4-206ENST00000468253 SLC25A30Q5SVS4 291 aa17.09■□□□□ 0.33
NPHP4-206ENST00000468253 DEGS2Q6QHC5 323 aa17.09■□□□□ 0.33
NPHP4-206ENST00000468253 NAA40Q86UY6 237 aa17.09■□□□□ 0.33
NPHP4-206ENST00000468253 GID4Q8IVV7 300 aa17.09■□□□□ 0.33
NPHP4-206ENST00000468253 ZNF525Q8N782 197 aa17.09■□□□□ 0.33
NPHP4-206ENST00000468253 EME1Q96AY2 570 aa17.09■□□□□ 0.33
NPHP4-206ENST00000468253 IL4I1Q96RQ9 567 aa17.09■□□□□ 0.33
NPHP4-206ENST00000468253 MNTQ99583 582 aa17.09■□□□□ 0.33
NPHP4-206ENST00000468253 COPS4Q9BT78 406 aa17.09■□□□□ 0.33
NPHP4-206ENST00000468253 POFUT1Q9H488 388 aa17.09■□□□□ 0.33
NPHP4-206ENST00000468253 C8orf4Q9NR00 106 aa17.09■□□□□ 0.33
NPHP4-206ENST00000468253 TMEM14AQ9Y6G1 99 aa17.09■□□□□ 0.33
NPHP4-206ENST00000468253 MED13LQ71F56 2210 aa17.09■□□□□ 0.33
NPHP4-206ENST00000468253 H7C1Q1 480 aa17.08■□□□□ 0.32
NPHP4-206ENST00000468253 LYNP07948 512 aa17.08■□□□□ 0.32
NPHP4-206ENST00000468253 SELEP16581 610 aa17.08■□□□□ 0.32
NPHP4-206ENST00000468253 GIFP27352 417 aa17.08■□□□□ 0.32
NPHP4-206ENST00000468253 OPRL1P41146 370 aa17.08■□□□□ 0.32
NPHP4-206ENST00000468253 CDK5R2Q13319 367 aa17.08■□□□□ 0.32
NPHP4-206ENST00000468253 BIVMQ86UB2 503 aa17.08■□□□□ 0.32
NPHP4-206ENST00000468253 RDH5Q92781 318 aa17.08■□□□□ 0.32
NPHP4-206ENST00000468253 TPK1Q9H3S4 243 aa17.08■□□□□ 0.32
NPHP4-206ENST00000468253 NIPAL2Q9H841 368 aa17.08■□□□□ 0.32
NPHP4-206ENST00000468253 WARS2Q9UGM6 360 aaKnown RBP17.08■□□□□ 0.32
NPHP4-206ENST00000468253 IGHV4-30-2A0A087WSY4 118 aa17.07■□□□□ 0.32
NPHP4-206ENST00000468253 TIMM8AO60220 97 aaPredicted RBP17.07■□□□□ 0.32
NPHP4-206ENST00000468253 SELENOFO60613 162 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms