RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 DNAJC3Q13217 504 aa3.06□□□□□ -1.92
GAPVD1-211ENST00000467707 EIF4EBP1Q13541 118 aaPredicted RBP3.06□□□□□ -1.92
GAPVD1-211ENST00000467707 TRMT5Q32P41 509 aaKnown RBP3.06□□□□□ -1.92
GAPVD1-211ENST00000467707 Q5W150 140 aa3.06□□□□□ -1.92
GAPVD1-211ENST00000467707 Q6ZR03 302 aa3.06□□□□□ -1.92
GAPVD1-211ENST00000467707 NTM-AS1Q6ZSK4 140 aa3.06□□□□□ -1.92
GAPVD1-211ENST00000467707 UBN2Q6ZU65 1347 aa3.06□□□□□ -1.92
GAPVD1-211ENST00000467707 WDR86Q86TI4 376 aa3.06□□□□□ -1.92
GAPVD1-211ENST00000467707 OR11H7Q8NGC8 314 aa3.06□□□□□ -1.92
GAPVD1-211ENST00000467707 OR56A4Q8NGH8 313 aa3.06□□□□□ -1.92
GAPVD1-211ENST00000467707 OR52E5Q8NH55 327 aa3.06□□□□□ -1.92
GAPVD1-211ENST00000467707 OR10G6Q8NH81 332 aa3.06□□□□□ -1.92
GAPVD1-211ENST00000467707 LRRC29Q8WV35 223 aa3.06□□□□□ -1.92
GAPVD1-211ENST00000467707 PALLDQ8WX93 1383 aa3.06□□□□□ -1.92
GAPVD1-211ENST00000467707 PEX13Q92968 403 aa3.06□□□□□ -1.92
GAPVD1-211ENST00000467707 PTX4Q96A99 478 aa3.06□□□□□ -1.92
GAPVD1-211ENST00000467707 NARS2Q96I59 477 aaKnown RBP3.06□□□□□ -1.92
GAPVD1-211ENST00000467707 FOXC2Q99958 501 aa3.06□□□□□ -1.92
GAPVD1-211ENST00000467707 PLEKHG2Q9H7P9 1386 aa3.06□□□□□ -1.92
GAPVD1-211ENST00000467707 AGPAT4Q9NRZ5 378 aa3.06□□□□□ -1.92
GAPVD1-211ENST00000467707 DDX18Q9NVP1 670 aaKnown RBP3.06□□□□□ -1.92
GAPVD1-211ENST00000467707 SLC39A1Q9NY26 324 aa3.06□□□□□ -1.92
GAPVD1-211ENST00000467707 ARHGAP21Q5T5U3 1957 aa3.05□□□□□ -1.92
GAPVD1-211ENST00000467707 TTC41PQ6P2S7 1318 aa3.05□□□□□ -1.92
GAPVD1-211ENST00000467707 IGHV1OR15-9A0A0B4J2B8 117 aa3.05□□□□□ -1.92
GAPVD1-211ENST00000467707 A0A1B0GTQ1 180 aa3.05□□□□□ -1.92
GAPVD1-211ENST00000467707 TMEM120BA0PK00 339 aa3.05□□□□□ -1.92
GAPVD1-211ENST00000467707 SYCE1LA8MT33 242 aa3.05□□□□□ -1.92
GAPVD1-211ENST00000467707 H7C417 338 aa3.05□□□□□ -1.92
GAPVD1-211ENST00000467707 L7N2F9 121 aa3.05□□□□□ -1.92
GAPVD1-211ENST00000467707 XRCC2O43543 280 aa3.05□□□□□ -1.92
GAPVD1-211ENST00000467707 GCM2O75603 506 aaPredicted RBP3.05□□□□□ -1.92
GAPVD1-211ENST00000467707 MRPL3P09001 348 aaKnown RBP3.05□□□□□ -1.92
GAPVD1-211ENST00000467707 CCT6AP40227 531 aaKnown RBP3.05□□□□□ -1.92
GAPVD1-211ENST00000467707 RBM34P42696 430 aaKnown RBP3.05□□□□□ -1.92
GAPVD1-211ENST00000467707 SLC1A2P43004 574 aa3.05□□□□□ -1.92
GAPVD1-211ENST00000467707 SMUG1Q53HV7 270 aa3.05□□□□□ -1.92
GAPVD1-211ENST00000467707 PRMT9Q6P2P2 845 aa3.05□□□□□ -1.92
GAPVD1-211ENST00000467707 HORMAD1Q86X24 394 aa3.05□□□□□ -1.92
GAPVD1-211ENST00000467707 RIMKLAQ8IXN7 391 aa3.05□□□□□ -1.92
GAPVD1-211ENST00000467707 SNX31Q8N9S9 440 aa3.05□□□□□ -1.92
GAPVD1-211ENST00000467707 C11orf72Q8NBR9 251 aa3.05□□□□□ -1.92
GAPVD1-211ENST00000467707 RGP1Q92546 391 aaPredicted RBP3.05□□□□□ -1.92
GAPVD1-211ENST00000467707 FRZBQ92765 325 aa3.05□□□□□ -1.92
GAPVD1-211ENST00000467707 ISG20Q96AZ6 181 aaKnown RBP3.05□□□□□ -1.92
GAPVD1-211ENST00000467707 COL21A1Q96P44 957 aa3.05□□□□□ -1.92
GAPVD1-211ENST00000467707 RNF157Q96PX1 679 aa3.05□□□□□ -1.92
GAPVD1-211ENST00000467707 HSD17B10Q99714 261 aaKnown RBP3.05□□□□□ -1.92
GAPVD1-211ENST00000467707 SPIN2AQ99865 258 aa3.05□□□□□ -1.92
GAPVD1-211ENST00000467707 SPIN2BQ9BPZ2 258 aa3.05□□□□□ -1.92
GAPVD1-211ENST00000467707 EDA2RQ9HAV5 297 aa3.05□□□□□ -1.92
GAPVD1-211ENST00000467707 ACP6Q9NPH0 428 aa3.05□□□□□ -1.92
GAPVD1-211ENST00000467707 ZC4H2Q9NQZ6 224 aa3.05□□□□□ -1.92
GAPVD1-211ENST00000467707 PEF1Q9UBV8 284 aaKnown RBP3.05□□□□□ -1.92
GAPVD1-211ENST00000467707 MTFP1Q9UDX5 166 aa3.05□□□□□ -1.92
GAPVD1-211ENST00000467707 IGSF9BQ9UPX0 1349 aa3.04□□□□□ -1.92
GAPVD1-211ENST00000467707 IGHV3OR16-9A0A0B4J2B5 98 aa3.04□□□□□ -1.92
GAPVD1-211ENST00000467707 GOLGA6L7A0A1B0GV03 622 aa3.04□□□□□ -1.92
GAPVD1-211ENST00000467707 TEX46H3BTG2 121 aa3.04□□□□□ -1.92
GAPVD1-211ENST00000467707 RBFOX2O43251 390 aaKnown RBP eCLIP3.04□□□□□ -1.92
GAPVD1-211ENST00000467707 APCSP02743 223 aa3.04□□□□□ -1.92
GAPVD1-211ENST00000467707 RHOXF2BP0C7M4 288 aa3.04□□□□□ -1.92
GAPVD1-211ENST00000467707 OR56A5P0C7T3 313 aa3.04□□□□□ -1.92
GAPVD1-211ENST00000467707 C1GALT1C1LP0DN25 315 aa3.04□□□□□ -1.92
GAPVD1-211ENST00000467707 GFAPP14136 432 aa3.04□□□□□ -1.92
GAPVD1-211ENST00000467707 CSNK2A2P19784 350 aaPredicted RBP3.04□□□□□ -1.92
GAPVD1-211ENST00000467707 MYL9P24844 172 aa3.04□□□□□ -1.92
GAPVD1-211ENST00000467707 PFN2P35080 140 aa3.04□□□□□ -1.92
GAPVD1-211ENST00000467707 RFC3P40938 356 aa3.04□□□□□ -1.92
GAPVD1-211ENST00000467707 SLC11A1P49279 550 aa3.04□□□□□ -1.92
GAPVD1-211ENST00000467707 CDKN2DP55273 166 aa3.04□□□□□ -1.92
GAPVD1-211ENST00000467707 CLDN8P56748 225 aa3.04□□□□□ -1.92
GAPVD1-211ENST00000467707 RPS23P62266 143 aaKnown RBP3.04□□□□□ -1.92
GAPVD1-211ENST00000467707 RAB11AP62491 216 aa3.04□□□□□ -1.92
GAPVD1-211ENST00000467707 RCAN2Q14206 197 aa3.04□□□□□ -1.92
GAPVD1-211ENST00000467707 RAB11BQ15907 218 aa3.04□□□□□ -1.92
GAPVD1-211ENST00000467707 KLHL40Q2TBA0 621 aa3.04□□□□□ -1.92
GAPVD1-211ENST00000467707 LINC00483Q53H64 154 aa3.04□□□□□ -1.92
GAPVD1-211ENST00000467707 PIP5KL1Q5T9C9 394 aa3.04□□□□□ -1.92
GAPVD1-211ENST00000467707 RWDD4Q6NW29 188 aaKnown RBP3.04□□□□□ -1.92
GAPVD1-211ENST00000467707 H3F3CQ6NXT2 135 aa3.04□□□□□ -1.92
GAPVD1-211ENST00000467707 WDR82Q6UXN9 313 aa3.04□□□□□ -1.92
GAPVD1-211ENST00000467707 CDKL3Q8IVW4 592 aaPredicted RBP3.04□□□□□ -1.92
GAPVD1-211ENST00000467707 VKORC1L1Q8N0U8 176 aa3.04□□□□□ -1.92
GAPVD1-211ENST00000467707 FAM184AQ8NB25 1140 aa3.04□□□□□ -1.92
GAPVD1-211ENST00000467707 INO80EQ8NBZ0 244 aaPredicted RBP3.04□□□□□ -1.92
GAPVD1-211ENST00000467707 RPEQ96AT9 228 aa3.04□□□□□ -1.92
GAPVD1-211ENST00000467707 BEX1Q9HBH7 125 aa3.04□□□□□ -1.92
GAPVD1-211ENST00000467707 MYOZ1Q9NP98 299 aaPredicted RBP3.04□□□□□ -1.92
GAPVD1-211ENST00000467707 PXMP2Q9NR77 195 aa3.04□□□□□ -1.92
GAPVD1-211ENST00000467707 CHRAC1Q9NRG0 131 aa3.04□□□□□ -1.92
GAPVD1-211ENST00000467707 AHSPQ9NZD4 102 aa3.04□□□□□ -1.92
GAPVD1-211ENST00000467707 NACAE9PAV3 2078 aa3.04□□□□□ -1.92
GAPVD1-211ENST00000467707 TRAV19A0A0A6YYK7 116 aa3.03□□□□□ -1.92
GAPVD1-211ENST00000467707 A0A0J9YXV3 536 aa3.03□□□□□ -1.92
GAPVD1-211ENST00000467707 SLC22A5O76082 557 aa3.03□□□□□ -1.92
GAPVD1-211ENST00000467707 GLAP06280 429 aa3.03□□□□□ -1.92
GAPVD1-211ENST00000467707 TACSTD2P09758 323 aa3.03□□□□□ -1.92
GAPVD1-211ENST00000467707 POLR2MP0CAP2 368 aa3.03□□□□□ -1.92
GAPVD1-211ENST00000467707 RAB5AP20339 215 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms