RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 VDAC2P45880 294 aaPredicted RBP8.3□□□□□ -1.08
HDAC3-203ENST00000467533 RAD23AP54725 363 aa8.3□□□□□ -1.08
HDAC3-203ENST00000467533 UGT2B15P54855 530 aa8.3□□□□□ -1.08
HDAC3-203ENST00000467533 UFM1P61960 85 aa8.3□□□□□ -1.08
HDAC3-203ENST00000467533 CD83Q01151 205 aa8.3□□□□□ -1.08
HDAC3-203ENST00000467533 RPL18Q07020 188 aaKnown RBP8.3□□□□□ -1.08
HDAC3-203ENST00000467533 SCRN3Q0VDG4 424 aa8.3□□□□□ -1.08
HDAC3-203ENST00000467533 KHDC1LQ5JSQ8 128 aa8.3□□□□□ -1.08
HDAC3-203ENST00000467533 BEND6Q5SZJ8 279 aaPredicted RBP8.3□□□□□ -1.08
HDAC3-203ENST00000467533 NCR3LG1Q68D85 454 aa8.3□□□□□ -1.08
HDAC3-203ENST00000467533 NXNQ6DKJ4 435 aa8.3□□□□□ -1.08
HDAC3-203ENST00000467533 TTC33Q6PID6 262 aaPredicted RBP8.3□□□□□ -1.08
HDAC3-203ENST00000467533 SLC25A47Q6Q0C1 308 aa8.3□□□□□ -1.08
HDAC3-203ENST00000467533 Q8N2B8 174 aa8.3□□□□□ -1.08
HDAC3-203ENST00000467533 Q8N7P7 452 aa8.3□□□□□ -1.08
HDAC3-203ENST00000467533 CELF2-AS1Q8N7Q2 184 aa8.3□□□□□ -1.08
HDAC3-203ENST00000467533 LY6G5BQ8NDX9 201 aa8.3□□□□□ -1.08
HDAC3-203ENST00000467533 OR5L1Q8NGL2 311 aa8.3□□□□□ -1.08
HDAC3-203ENST00000467533 SLC7A6Q92536 515 aa8.3□□□□□ -1.08
HDAC3-203ENST00000467533 TFAP2CQ92754 450 aa8.3□□□□□ -1.08
HDAC3-203ENST00000467533 RASD2Q96D21 266 aa8.3□□□□□ -1.08
HDAC3-203ENST00000467533 NMD3Q96D46 503 aaKnown RBP8.3□□□□□ -1.08
HDAC3-203ENST00000467533 RCHY1Q96PM5 261 aa8.3□□□□□ -1.08
HDAC3-203ENST00000467533 SPATA5L1Q9BVQ7 753 aa8.3□□□□□ -1.08
HDAC3-203ENST00000467533 CDCA4Q9BXL8 241 aa8.3□□□□□ -1.08
HDAC3-203ENST00000467533 WNT10AQ9GZT5 417 aa8.3□□□□□ -1.08
HDAC3-203ENST00000467533 MUC13Q9H3R2 512 aa8.3□□□□□ -1.08
HDAC3-203ENST00000467533 INIPQ9NRY2 104 aa8.3□□□□□ -1.08
HDAC3-203ENST00000467533 ZMAT5Q9UDW3 170 aaKnown RBP8.3□□□□□ -1.08
HDAC3-203ENST00000467533 IGHV3OR15-7A0A075B7D8 119 aa8.29□□□□□ -1.08
HDAC3-203ENST00000467533 TRBV23-1A0A0A0MS06 115 aa8.29□□□□□ -1.08
HDAC3-203ENST00000467533 TCRBV4S1A1TA0A5B7 111 aa8.29□□□□□ -1.08
HDAC3-203ENST00000467533 MEGF11A6BM72 1044 aa8.29□□□□□ -1.08
HDAC3-203ENST00000467533 H0YHG0 523 aa8.29□□□□□ -1.08
HDAC3-203ENST00000467533 ASAH2BP0C7U1 165 aa8.29□□□□□ -1.08
HDAC3-203ENST00000467533 ETS2P15036 469 aa8.29□□□□□ -1.08
HDAC3-203ENST00000467533 PAICSP22234 425 aaKnown RBP8.29□□□□□ -1.08
HDAC3-203ENST00000467533 PRSS12P56730 875 aa8.29□□□□□ -1.08
HDAC3-203ENST00000467533 POU4F2Q12837 409 aa8.29□□□□□ -1.08
HDAC3-203ENST00000467533 ECH1Q13011 328 aa8.29□□□□□ -1.08
HDAC3-203ENST00000467533 TOP3AQ13472 1001 aaPredicted RBP8.29□□□□□ -1.08
HDAC3-203ENST00000467533 TMEM95Q3KNT9 176 aa8.29□□□□□ -1.08
HDAC3-203ENST00000467533 GTDC1Q4AE62 458 aa8.29□□□□□ -1.08
HDAC3-203ENST00000467533 ARMC4Q5T2S8 1044 aa8.29□□□□□ -1.08
HDAC3-203ENST00000467533 HHATQ5VTY9 493 aa8.29□□□□□ -1.08
HDAC3-203ENST00000467533 UNQ9370/PRO34162Q6UXP9 181 aa8.29□□□□□ -1.08
HDAC3-203ENST00000467533 TRMT10CQ7L0Y3 403 aaKnown RBP8.29□□□□□ -1.08
HDAC3-203ENST00000467533 ZNF572Q7Z3I7 529 aaPredicted RBP8.29□□□□□ -1.08
HDAC3-203ENST00000467533 SYT9Q86SS6 491 aa8.29□□□□□ -1.08
HDAC3-203ENST00000467533 KRT73Q86Y46 540 aa8.29□□□□□ -1.08
HDAC3-203ENST00000467533 FAM90A1Q86YD7 464 aa8.29□□□□□ -1.08
HDAC3-203ENST00000467533 LINC00482Q8N8I6 264 aa8.29□□□□□ -1.08
HDAC3-203ENST00000467533 PCYOX1LQ8NBM8 494 aa8.29□□□□□ -1.08
HDAC3-203ENST00000467533 OR5AU1Q8NGC0 362 aa8.29□□□□□ -1.08
HDAC3-203ENST00000467533 NFKBIDQ8NI38 313 aa8.29□□□□□ -1.08
HDAC3-203ENST00000467533 TNFRSF14Q92956 283 aa8.29□□□□□ -1.08
HDAC3-203ENST00000467533 VPS33AQ96AX1 596 aa8.29□□□□□ -1.08
HDAC3-203ENST00000467533 RBMXL1Q96E39 390 aaKnown RBP8.29□□□□□ -1.08
HDAC3-203ENST00000467533 ZBTB18Q99592 522 aa8.29□□□□□ -1.08
HDAC3-203ENST00000467533 PRSS22Q9GZN4 317 aa8.29□□□□□ -1.08
HDAC3-203ENST00000467533 WDR76Q9H967 626 aa8.29□□□□□ -1.08
HDAC3-203ENST00000467533 EMC7Q9NPA0 242 aa8.29□□□□□ -1.08
HDAC3-203ENST00000467533 TSSC4Q9Y5U2 329 aaPredicted RBP8.29□□□□□ -1.08
HDAC3-203ENST00000467533 CSMD3Q7Z407 3707 aa8.28□□□□□ -1.08
HDAC3-203ENST00000467533 A0A1B0GW55 424 aa8.28□□□□□ -1.08
HDAC3-203ENST00000467533 SMIM23A6NLE4 172 aa8.28□□□□□ -1.08
HDAC3-203ENST00000467533 CPSF4LA6NMK7 179 aaKnown RBP8.28□□□□□ -1.08
HDAC3-203ENST00000467533 J3QW42 95 aa8.28□□□□□ -1.08
HDAC3-203ENST00000467533 SYNGR1O43759 233 aa8.28□□□□□ -1.08
HDAC3-203ENST00000467533 TPST2O60704 377 aa8.28□□□□□ -1.08
HDAC3-203ENST00000467533 ALDOBP05062 364 aa8.28□□□□□ -1.08
HDAC3-203ENST00000467533 DUX4L2P0CJ85 424 aa8.28□□□□□ -1.08
HDAC3-203ENST00000467533 DUX4L3P0CJ86 424 aa8.28□□□□□ -1.08
HDAC3-203ENST00000467533 DUX4L4P0CJ87 422 aa8.28□□□□□ -1.08
HDAC3-203ENST00000467533 DUX4L5P0CJ88 424 aa8.28□□□□□ -1.08
HDAC3-203ENST00000467533 DUX4L6P0CJ89 424 aa8.28□□□□□ -1.08
HDAC3-203ENST00000467533 DUX4L7P0CJ90 424 aa8.28□□□□□ -1.08
HDAC3-203ENST00000467533 LBPP18428 481 aa8.28□□□□□ -1.08
HDAC3-203ENST00000467533 BGNP21810 368 aa8.28□□□□□ -1.08
HDAC3-203ENST00000467533 IL12AP29459 219 aa8.28□□□□□ -1.08
HDAC3-203ENST00000467533 CKAP4Q07065 602 aaKnown RBP8.28□□□□□ -1.08
HDAC3-203ENST00000467533 CNN3Q15417 329 aaKnown RBP8.28□□□□□ -1.08
HDAC3-203ENST00000467533 AANATQ16613 207 aa8.28□□□□□ -1.08
HDAC3-203ENST00000467533 TCTEX1D4Q5JR98 221 aa8.28□□□□□ -1.08
HDAC3-203ENST00000467533 ZNF613Q6PF04 617 aa8.28□□□□□ -1.08
HDAC3-203ENST00000467533 DUX4L9Q6RFH8 374 aaPredicted RBP8.28□□□□□ -1.08
HDAC3-203ENST00000467533 LINC00114Q6XXX2 140 aa8.28□□□□□ -1.08
HDAC3-203ENST00000467533 FOXL2NBQ6ZUU3 175 aa8.28□□□□□ -1.08
HDAC3-203ENST00000467533 H1FXQ92522 213 aaKnown RBP8.28□□□□□ -1.08
HDAC3-203ENST00000467533 RBP7Q96R05 134 aa8.28□□□□□ -1.08
HDAC3-203ENST00000467533 MCHR1Q99705 422 aa8.28□□□□□ -1.08
HDAC3-203ENST00000467533 WFDC6Q9BQY6 131 aa8.28□□□□□ -1.08
HDAC3-203ENST00000467533 MCRIP2Q9BUT9 160 aaKnown RBP8.28□□□□□ -1.08
HDAC3-203ENST00000467533 HCAR1Q9BXC0 346 aa8.28□□□□□ -1.08
HDAC3-203ENST00000467533 MEGF9Q9H1U4 602 aa8.28□□□□□ -1.08
HDAC3-203ENST00000467533 POLE4Q9NR33 117 aa8.28□□□□□ -1.08
HDAC3-203ENST00000467533 KAAG1Q9UBP8 84 aa8.28□□□□□ -1.08
HDAC3-203ENST00000467533 DUX4Q9UBX2 424 aa8.28□□□□□ -1.08
HDAC3-203ENST00000467533 LSM4Q9Y4Z0 139 aaKnown RBP8.28□□□□□ -1.08
HDAC3-203ENST00000467533 CAPN7Q9Y6W3 813 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms