RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 TRUB1Q8WWH5 349 aaKnown RBP9.46□□□□□ -0.9
MSH5-212ENST00000467319 APOBEC3DQ96AK3 386 aaPredicted RBP9.46□□□□□ -0.9
MSH5-212ENST00000467319 TRMT61AQ96FX7 289 aaKnown RBP9.46□□□□□ -0.9
MSH5-212ENST00000467319 ZNF799Q96GE5 643 aa9.46□□□□□ -0.9
MSH5-212ENST00000467319 ZNF582Q96NG8 517 aaPredicted RBP9.46□□□□□ -0.9
MSH5-212ENST00000467319 CNN2Q99439 309 aaKnown RBP9.46□□□□□ -0.9
MSH5-212ENST00000467319 OR2J1Q9GZK6 312 aa9.46□□□□□ -0.9
MSH5-212ENST00000467319 YIPF3Q9GZM5 350 aa9.46□□□□□ -0.9
MSH5-212ENST00000467319 DCLRE1BQ9H816 532 aa9.46□□□□□ -0.9
MSH5-212ENST00000467319 BARX1Q9HBU1 254 aaPredicted RBP9.46□□□□□ -0.9
MSH5-212ENST00000467319 IMPAD1Q9NX62 359 aa9.46□□□□□ -0.9
MSH5-212ENST00000467319 SMPD3Q9NY59 655 aaPredicted RBP9.46□□□□□ -0.9
MSH5-212ENST00000467319 ACANP16112 2415 aa9.46□□□□□ -0.9
MSH5-212ENST00000467319 MTORP42345 2549 aa9.45□□□□□ -0.9
MSH5-212ENST00000467319 A0A1W2PPW3 197 aa9.45□□□□□ -0.9
MSH5-212ENST00000467319 PRR32B1ATL7 298 aa9.45□□□□□ -0.9
MSH5-212ENST00000467319 SLC16A6O15403 523 aa9.45□□□□□ -0.9
MSH5-212ENST00000467319 KITLGP21583 273 aa9.45□□□□□ -0.9
MSH5-212ENST00000467319 ALDH3B1P43353 468 aa9.45□□□□□ -0.9
MSH5-212ENST00000467319 EFNA4P52798 201 aa9.45□□□□□ -0.9
MSH5-212ENST00000467319 NUDT6P53370 316 aa9.45□□□□□ -0.9
MSH5-212ENST00000467319 TMED1Q13445 227 aa9.45□□□□□ -0.9
MSH5-212ENST00000467319 LPCAT4Q643R3 524 aa9.45□□□□□ -0.9
MSH5-212ENST00000467319 DRAM2Q6UX65 266 aa9.45□□□□□ -0.9
MSH5-212ENST00000467319 FBXW12Q6X9E4 464 aa9.45□□□□□ -0.9
MSH5-212ENST00000467319 PRSS45Q7RTY3 260 aa9.45□□□□□ -0.9
MSH5-212ENST00000467319 TGIF2LYQ8IUE0 185 aa9.45□□□□□ -0.9
MSH5-212ENST00000467319 RFLNBQ8N5W9 214 aa9.45□□□□□ -0.9
MSH5-212ENST00000467319 SPTSSAQ969W0 71 aa9.45□□□□□ -0.9
MSH5-212ENST00000467319 COG8Q96MW5 612 aa9.45□□□□□ -0.9
MSH5-212ENST00000467319 KCNJ15Q99712 375 aa9.45□□□□□ -0.9
MSH5-212ENST00000467319 COPS4Q9BT78 406 aa9.45□□□□□ -0.9
MSH5-212ENST00000467319 RNPEPL1Q9HAU8 725 aa9.45□□□□□ -0.9
MSH5-212ENST00000467319 DYNLRB1Q9NP97 96 aa9.45□□□□□ -0.9
MSH5-212ENST00000467319 FAM118AQ9NWS6 357 aa9.45□□□□□ -0.9
MSH5-212ENST00000467319 DNAJC27Q9NZQ0 273 aa9.45□□□□□ -0.9
MSH5-212ENST00000467319 NKX1-2Q9UD57 310 aaPredicted RBP9.45□□□□□ -0.9
MSH5-212ENST00000467319 WARS2Q9UGM6 360 aaKnown RBP9.45□□□□□ -0.9
MSH5-212ENST00000467319 STARD10Q9Y365 291 aa9.45□□□□□ -0.9
MSH5-212ENST00000467319 GRIP1Q9Y3R0 1128 aa9.45□□□□□ -0.9
MSH5-212ENST00000467319 PMF1-BGLAPU3KQ54 211 aa9.45□□□□□ -0.9
MSH5-212ENST00000467319 TEP1Q99973 2627 aaKnown RBP9.45□□□□□ -0.9
MSH5-212ENST00000467319 A0A1B0GWJ7 208 aa9.44□□□□□ -0.9
MSH5-212ENST00000467319 C5orf63A6NC05 138 aa9.44□□□□□ -0.9
MSH5-212ENST00000467319 F5H5K5 113 aa9.44□□□□□ -0.9
MSH5-212ENST00000467319 LYNP07948 512 aa9.44□□□□□ -0.9
MSH5-212ENST00000467319 ADH4P08319 380 aa9.44□□□□□ -0.9
MSH5-212ENST00000467319 ADRA2AP08913 450 aa9.44□□□□□ -0.9
MSH5-212ENST00000467319 MRPL3P09001 348 aaKnown RBP9.44□□□□□ -0.9
MSH5-212ENST00000467319 RAC2P15153 192 aa9.44□□□□□ -0.9
MSH5-212ENST00000467319 MMP15P51511 669 aa9.44□□□□□ -0.9
MSH5-212ENST00000467319 TPTEP56180 551 aa9.44□□□□□ -0.9
MSH5-212ENST00000467319 PSMA6P60900 246 aaKnown RBP9.44□□□□□ -0.9
MSH5-212ENST00000467319 GRB2P62993 217 aaKnown RBP9.44□□□□□ -0.9
MSH5-212ENST00000467319 ROM1Q03395 351 aa9.44□□□□□ -0.9
MSH5-212ENST00000467319 OCLNQ16625 522 aa9.44□□□□□ -0.9
MSH5-212ENST00000467319 LRRC36Q1X8D7 754 aa9.44□□□□□ -0.9
MSH5-212ENST00000467319 SNAI3Q3KNW1 292 aa9.44□□□□□ -0.9
MSH5-212ENST00000467319 ZNF718Q3SXZ3 478 aa9.44□□□□□ -0.9
MSH5-212ENST00000467319 ENTHD1Q8IYW4 607 aa9.44□□□□□ -0.9
MSH5-212ENST00000467319 GTF3AQ92664 365 aaKnown RBP9.44□□□□□ -0.9
MSH5-212ENST00000467319 UBE2FQ969M7 185 aa9.44□□□□□ -0.9
MSH5-212ENST00000467319 DLL4Q9NR61 685 aa9.44□□□□□ -0.9
MSH5-212ENST00000467319 SLCO1C1Q9NYB5 712 aa9.44□□□□□ -0.9
MSH5-212ENST00000467319 TAAR3PQ9P1P4 343 aa9.44□□□□□ -0.9
MSH5-212ENST00000467319 CGGBP1Q9UFW8 167 aaPredicted RBP9.44□□□□□ -0.9
MSH5-212ENST00000467319 DUSP13Q9UII6 198 aa9.44□□□□□ -0.9
MSH5-212ENST00000467319 COPS3Q9UNS2 423 aa9.44□□□□□ -0.9
MSH5-212ENST00000467319 GMPPBQ9Y5P6 360 aa9.44□□□□□ -0.9
MSH5-212ENST00000467319 LOC100130705A0A1B0GUX0 176 aa9.43□□□□□ -0.9
MSH5-212ENST00000467319 ZSCAN5BA6NJL1 495 aa9.43□□□□□ -0.9
MSH5-212ENST00000467319 ENTPD6O75354 484 aa9.43□□□□□ -0.9
MSH5-212ENST00000467319 NCR1O76036 304 aa9.43□□□□□ -0.9
MSH5-212ENST00000467319 LY6HO94772 140 aa9.43□□□□□ -0.9
MSH5-212ENST00000467319 F12P00748 615 aaPredicted RBP9.43□□□□□ -0.9
MSH5-212ENST00000467319 SBK2P0C263 348 aa9.43□□□□□ -0.9
MSH5-212ENST00000467319 GCH1P30793 250 aa9.43□□□□□ -0.9
MSH5-212ENST00000467319 SLC15A1P46059 708 aa9.43□□□□□ -0.9
MSH5-212ENST00000467319 SELENOVP59797 346 aa9.43□□□□□ -0.9
MSH5-212ENST00000467319 SLC34A1Q06495 639 aa9.43□□□□□ -0.9
MSH5-212ENST00000467319 POU4F2Q12837 409 aa9.43□□□□□ -0.9
MSH5-212ENST00000467319 PSG7Q13046 419 aa9.43□□□□□ -0.9
MSH5-212ENST00000467319 NKPD1Q17RQ9 610 aa9.43□□□□□ -0.9
MSH5-212ENST00000467319 ALKBH6Q3KRA9 238 aa9.43□□□□□ -0.9
MSH5-212ENST00000467319 MEDAGQ5VYS4 303 aa9.43□□□□□ -0.9
MSH5-212ENST00000467319 SPATC1Q76KD6 591 aa9.43□□□□□ -0.9
MSH5-212ENST00000467319 NAA40Q86UY6 237 aa9.43□□□□□ -0.9
MSH5-212ENST00000467319 ZCCHC24Q8N2G6 241 aaKnown RBP9.43□□□□□ -0.9
MSH5-212ENST00000467319 GALNT4Q8N4A0 578 aa9.43□□□□□ -0.9
MSH5-212ENST00000467319 RHOXF1Q8NHV9 184 aa9.43□□□□□ -0.9
MSH5-212ENST00000467319 RFKQ969G6 155 aa9.43□□□□□ -0.9
MSH5-212ENST00000467319 HAVCR1Q96D42 359 aa9.43□□□□□ -0.9
MSH5-212ENST00000467319 MNTQ99583 582 aa9.43□□□□□ -0.9
MSH5-212ENST00000467319 TPK1Q9H3S4 243 aa9.43□□□□□ -0.9
MSH5-212ENST00000467319 MS4A5Q9H3V2 200 aa9.43□□□□□ -0.9
MSH5-212ENST00000467319 CENPMQ9NSP4 180 aa9.43□□□□□ -0.9
MSH5-212ENST00000467319 CLN6Q9NWW5 311 aa9.43□□□□□ -0.9
MSH5-212ENST00000467319 NKIRAS2Q9NYR9 191 aa9.43□□□□□ -0.9
MSH5-212ENST00000467319 LAMP5Q9UJQ1 280 aa9.43□□□□□ -0.9
MSH5-212ENST00000467319 PURGQ9UJV8 347 aaKnown RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms