RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 MYLK2Q9H1R3 596 aa14.77□□□□□ -0.05
COL7A1-206ENST00000466591 GCM1Q9NP62 436 aa14.77□□□□□ -0.05
COL7A1-206ENST00000466591 PPIAL4AQ9Y536 164 aa14.77□□□□□ -0.05
COL7A1-206ENST00000466591 LHFPL6Q9Y693 200 aa14.77□□□□□ -0.05
COL7A1-206ENST00000466591 PPIAL4EA0A075B759 164 aa14.76□□□□□ -0.05
COL7A1-206ENST00000466591 PPIAL4CA0A0B4J2A2 164 aa14.76□□□□□ -0.05
COL7A1-206ENST00000466591 PPIAL4DF5H284 164 aa14.76□□□□□ -0.05
COL7A1-206ENST00000466591 TMEM178BH3BS89 294 aa14.76□□□□□ -0.05
COL7A1-206ENST00000466591 ZNF205O95201 554 aa14.76□□□□□ -0.05
COL7A1-206ENST00000466591 CYB5R3P00387 301 aaPredicted RBP14.76□□□□□ -0.05
COL7A1-206ENST00000466591 PPIAL4FP0DN26 164 aa14.76□□□□□ -0.05
COL7A1-206ENST00000466591 HIST1H1CP16403 213 aaKnown RBP14.76□□□□□ -0.05
COL7A1-206ENST00000466591 CFPP27918 469 aa14.76□□□□□ -0.05
COL7A1-206ENST00000466591 MSX2P35548 267 aaPredicted RBP14.76□□□□□ -0.05
COL7A1-206ENST00000466591 TPTEP56180 551 aa14.76□□□□□ -0.05
COL7A1-206ENST00000466591 GNB2P62879 340 aa14.76□□□□□ -0.05
COL7A1-206ENST00000466591 HNRNPA0Q13151 305 aaKnown RBP14.76□□□□□ -0.05
COL7A1-206ENST00000466591 ZMYND11Q15326 602 aa14.76□□□□□ -0.05
COL7A1-206ENST00000466591 CLEC12AQ5QGZ9 265 aa14.76□□□□□ -0.05
COL7A1-206ENST00000466591 SLC35F1Q5T1Q4 408 aa14.76□□□□□ -0.05
COL7A1-206ENST00000466591 FBXW12Q6X9E4 464 aa14.76□□□□□ -0.05
COL7A1-206ENST00000466591 MRPL21Q7Z2W9 205 aaKnown RBP14.76□□□□□ -0.05
COL7A1-206ENST00000466591 MOGAT3Q86VF5 341 aa14.76□□□□□ -0.05
COL7A1-206ENST00000466591 PROKR2Q8NFJ6 384 aa14.76□□□□□ -0.05
COL7A1-206ENST00000466591 OR52E2Q8NGJ4 325 aa14.76□□□□□ -0.05
COL7A1-206ENST00000466591 ZNF420Q8TAQ5 688 aaPredicted RBP14.76□□□□□ -0.05
COL7A1-206ENST00000466591 SPTSSAQ969W0 71 aa14.76□□□□□ -0.05
COL7A1-206ENST00000466591 ZMYND19Q96E35 227 aaPredicted RBP14.76□□□□□ -0.05
COL7A1-206ENST00000466591 MEGF10Q96KG7 1140 aa14.76□□□□□ -0.05
COL7A1-206ENST00000466591 GPA33Q99795 319 aa14.76□□□□□ -0.05
COL7A1-206ENST00000466591 SSBP3Q9BWW4 388 aaPredicted RBP14.76□□□□□ -0.05
COL7A1-206ENST00000466591 FN3KQ9H479 309 aa14.76□□□□□ -0.05
COL7A1-206ENST00000466591 LRCH1Q9Y2L9 728 aa14.76□□□□□ -0.05
COL7A1-206ENST00000466591 TANC2Q9HCD6 1990 aa14.75□□□□□ -0.05
COL7A1-206ENST00000466591 ARPC2O15144 300 aa14.75□□□□□ -0.05
COL7A1-206ENST00000466591 IDH3BO43837 385 aa14.75□□□□□ -0.05
COL7A1-206ENST00000466591 SNX3O60493 162 aa14.75□□□□□ -0.05
COL7A1-206ENST00000466591 DCTN3O75935 186 aa14.75□□□□□ -0.05
COL7A1-206ENST00000466591 HSD17B1P14061 328 aa14.75□□□□□ -0.05
COL7A1-206ENST00000466591 ZFP36P26651 326 aaKnown RBP14.75□□□□□ -0.05
COL7A1-206ENST00000466591 GGT2P36268 569 aa14.75□□□□□ -0.05
COL7A1-206ENST00000466591 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.75□□□□□ -0.05
COL7A1-206ENST00000466591 COX10Q12887 443 aa14.75□□□□□ -0.05
COL7A1-206ENST00000466591 ZNF154Q13106 437 aa14.75□□□□□ -0.05
COL7A1-206ENST00000466591 TAF13Q15543 124 aa14.75□□□□□ -0.05
COL7A1-206ENST00000466591 RPL13AP3Q6NVV1 102 aa14.75□□□□□ -0.05
COL7A1-206ENST00000466591 PGAP1Q75T13 922 aa14.75□□□□□ -0.05
COL7A1-206ENST00000466591 ZDHHC21Q8IVQ6 265 aa14.75□□□□□ -0.05
COL7A1-206ENST00000466591 OR6V1Q8N148 313 aa14.75□□□□□ -0.05
COL7A1-206ENST00000466591 SLC26A10Q8NG04 563 aa14.75□□□□□ -0.05
COL7A1-206ENST00000466591 OR8B3Q8NGG8 313 aa14.75□□□□□ -0.05
COL7A1-206ENST00000466591 DHRS1Q96LJ7 313 aa14.75□□□□□ -0.05
COL7A1-206ENST00000466591 OR8B2Q96RD0 313 aa14.75□□□□□ -0.05
COL7A1-206ENST00000466591 MS4A7Q9GZW8 240 aaPredicted RBP14.75□□□□□ -0.05
COL7A1-206ENST00000466591 MIOXQ9UGB7 285 aa14.75□□□□□ -0.05
COL7A1-206ENST00000466591 TAGLN3Q9UI15 199 aa14.75□□□□□ -0.05
COL7A1-206ENST00000466591 NUP50Q9UKX7 468 aa14.75□□□□□ -0.05
COL7A1-206ENST00000466591 NOP16Q9Y3C1 178 aaKnown RBP14.75□□□□□ -0.05
COL7A1-206ENST00000466591 DYSFO75923 2080 aa14.75□□□□□ -0.05
COL7A1-206ENST00000466591 IGLV1-36A0A0B4J1U3 117 aa14.74□□□□□ -0.05
COL7A1-206ENST00000466591 CEACAM18A8MTB9 384 aa14.74□□□□□ -0.05
COL7A1-206ENST00000466591 F5H5P2 479 aa14.74□□□□□ -0.05
COL7A1-206ENST00000466591 DCTN6O00399 190 aa14.74□□□□□ -0.05
COL7A1-206ENST00000466591 ARPC3O15145 178 aa14.74□□□□□ -0.05
COL7A1-206ENST00000466591 ATP8B1O43520 1251 aa14.74□□□□□ -0.05
COL7A1-206ENST00000466591 FXYD6P3P58550 94 aa14.74□□□□□ -0.05
COL7A1-206ENST00000466591 SEC61A1P61619 476 aaKnown RBP14.74□□□□□ -0.05
COL7A1-206ENST00000466591 TRAP1Q12931 704 aaKnown RBP14.74□□□□□ -0.05
COL7A1-206ENST00000466591 CFAP77Q6ZQR2 320 aa14.74□□□□□ -0.05
COL7A1-206ENST00000466591 DEFB107AQ8IZN7 70 aa14.74□□□□□ -0.05
COL7A1-206ENST00000466591 OR4C15Q8NGM1 316 aa14.74□□□□□ -0.05
COL7A1-206ENST00000466591 MMP26Q9NRE1 261 aa14.74□□□□□ -0.05
COL7A1-206ENST00000466591 OPN4Q9UHM6 478 aa14.74□□□□□ -0.05
COL7A1-206ENST00000466591 N6AMT1Q9Y5N5 214 aa14.74□□□□□ -0.05
COL7A1-206ENST00000466591 GGT3PA6NGU5 568 aa14.73□□□□□ -0.05
COL7A1-206ENST00000466591 IQCF6A8MYZ5 107 aa14.73□□□□□ -0.05
COL7A1-206ENST00000466591 TNFRSF11BO00300 401 aa14.73□□□□□ -0.05
COL7A1-206ENST00000466591 KRT36O76013 467 aa14.73□□□□□ -0.05
COL7A1-206ENST00000466591 HLA-DPB1P04440 258 aa14.73□□□□□ -0.05
COL7A1-206ENST00000466591 RBMXP38159 391 aaKnown RBP14.73□□□□□ -0.05
COL7A1-206ENST00000466591 MNAT1P51948 309 aa14.73□□□□□ -0.05
COL7A1-206ENST00000466591 GNGT1P63211 74 aa14.73□□□□□ -0.05
COL7A1-206ENST00000466591 TSPAN31Q12999 210 aa14.73□□□□□ -0.05
COL7A1-206ENST00000466591 BAMBIQ13145 260 aa14.73□□□□□ -0.05
COL7A1-206ENST00000466591 OR8G1Q15617 311 aa14.73□□□□□ -0.05
COL7A1-206ENST00000466591 SLC18B1Q6NT16 456 aa14.73□□□□□ -0.05
COL7A1-206ENST00000466591 ZNF620Q6ZNG0 422 aa14.73□□□□□ -0.05
COL7A1-206ENST00000466591 LINC00471Q8N535 108 aa14.73□□□□□ -0.05
COL7A1-206ENST00000466591 SIGLECL1Q8N7X8 197 aa14.73□□□□□ -0.05
COL7A1-206ENST00000466591 DEFB108BQ8NET1 73 aa14.73□□□□□ -0.05
COL7A1-206ENST00000466591 OR2T4Q8NH00 348 aa14.73□□□□□ -0.05
COL7A1-206ENST00000466591 SLCO4A1Q96BD0 722 aa14.73□□□□□ -0.05
COL7A1-206ENST00000466591 NEIL1Q96FI4 390 aaPredicted RBP14.73□□□□□ -0.05
COL7A1-206ENST00000466591 SIGLEC11Q96RL6 698 aa14.73□□□□□ -0.05
COL7A1-206ENST00000466591 SLC30A2Q9BRI3 323 aa14.73□□□□□ -0.05
COL7A1-206ENST00000466591 IL1RAPQ9NPH3 570 aa14.73□□□□□ -0.05
COL7A1-206ENST00000466591 TBC1D23Q9NUY8 699 aa14.73□□□□□ -0.05
COL7A1-206ENST00000466591 KCNG2Q9UJ96 466 aa14.73□□□□□ -0.05
COL7A1-206ENST00000466591 ARL2BPQ9Y2Y0 163 aa14.73□□□□□ -0.05
COL7A1-206ENST00000466591 INSIG2Q9Y5U4 225 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms