RNA–Protein interactions for RNA: ENST00000466448.4

SRSF4-202, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS ALT2 TSL 3

Gene SRSF4, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-202ENST00000466448 SRRM5B3KS81 715 aa15.68■□□□□ 0.1
SRSF4-202ENST00000466448 SOCS2O14508 198 aa15.68■□□□□ 0.1
SRSF4-202ENST00000466448 PTP4A3O75365 173 aa15.68■□□□□ 0.1
SRSF4-202ENST00000466448 NDUFB2O95178 105 aa15.68■□□□□ 0.1
SRSF4-202ENST00000466448 KNG1P01042 644 aa15.68■□□□□ 0.1
SRSF4-202ENST00000466448 PRSS12P56730 875 aa15.68■□□□□ 0.1
SRSF4-202ENST00000466448 HIST1H3AP68431 136 aa15.68■□□□□ 0.1
SRSF4-202ENST00000466448 KCNMB1Q16558 191 aa15.68■□□□□ 0.1
SRSF4-202ENST00000466448 MEP1BQ16820 701 aa15.68■□□□□ 0.1
SRSF4-202ENST00000466448 IFI44LQ53G44 452 aa15.68■□□□□ 0.1
SRSF4-202ENST00000466448 HIST2H3PS2Q5TEC6 136 aa15.68■□□□□ 0.1
SRSF4-202ENST00000466448 WDR25Q64LD2 544 aaPredicted RBP15.68■□□□□ 0.1
SRSF4-202ENST00000466448 GPR139Q6DWJ6 353 aa15.68■□□□□ 0.1
SRSF4-202ENST00000466448 ZNF841Q6ZN19 808 aa15.68■□□□□ 0.1
SRSF4-202ENST00000466448 PTCHD4Q6ZW05 846 aa15.68■□□□□ 0.1
SRSF4-202ENST00000466448 HIST2H3AQ71DI3 136 aa15.68■□□□□ 0.1
SRSF4-202ENST00000466448 C1orf87Q8N0U7 546 aa15.68■□□□□ 0.1
SRSF4-202ENST00000466448 KIR3DL3Q8N743 410 aa15.68■□□□□ 0.1
SRSF4-202ENST00000466448 HSH2DQ96JZ2 352 aa15.68■□□□□ 0.1
SRSF4-202ENST00000466448 HDHD2Q9H0R4 259 aa15.68■□□□□ 0.1
SRSF4-202ENST00000466448 MARCH7Q9H992 704 aa15.68■□□□□ 0.1
SRSF4-202ENST00000466448 BEX1Q9HBH7 125 aa15.68■□□□□ 0.1
SRSF4-202ENST00000466448 SIGLEC7Q9Y286 467 aa15.68■□□□□ 0.1
SRSF4-202ENST00000466448 POLR1DQ9Y2S0 133 aa15.68■□□□□ 0.1
SRSF4-202ENST00000466448 LHFPL6Q9Y693 200 aa15.68■□□□□ 0.1
SRSF4-202ENST00000466448 A0A1B0GUS0 222 aa15.67■□□□□ 0.1
SRSF4-202ENST00000466448 C22orf46C9J442 243 aa15.67■□□□□ 0.1
SRSF4-202ENST00000466448 PHYHO14832 338 aa15.67■□□□□ 0.1
SRSF4-202ENST00000466448 FPR3P25089 353 aa15.67■□□□□ 0.1
SRSF4-202ENST00000466448 GATA4P43694 442 aa15.67■□□□□ 0.1
SRSF4-202ENST00000466448 RAG2P55895 527 aa15.67■□□□□ 0.1
SRSF4-202ENST00000466448 RELBQ01201 579 aa15.67■□□□□ 0.1
SRSF4-202ENST00000466448 SF3A3Q12874 501 aaKnown RBP eCLIP15.67■□□□□ 0.14e-6■■□□□ 11.7
SRSF4-202ENST00000466448 MAB21L1Q13394 359 aa15.67■□□□□ 0.1
SRSF4-202ENST00000466448 OCLNQ16625 522 aa15.67■□□□□ 0.1
SRSF4-202ENST00000466448 ZNF362Q5T0B9 420 aaPredicted RBP15.67■□□□□ 0.1
SRSF4-202ENST00000466448 GPR157Q5UAW9 335 aa15.67■□□□□ 0.1
SRSF4-202ENST00000466448 FIP1L1Q6UN15 594 aaKnown RBP15.67■□□□□ 0.1
SRSF4-202ENST00000466448 C17orf107Q6ZR85 190 aa15.67■□□□□ 0.1
SRSF4-202ENST00000466448 DCDC5Q6ZRR9 648 aa15.67■□□□□ 0.1
SRSF4-202ENST00000466448 RRM2BQ7LG56 351 aa15.67■□□□□ 0.1
SRSF4-202ENST00000466448 TSEN54Q7Z6J9 526 aaKnown RBP15.67■□□□□ 0.1
SRSF4-202ENST00000466448 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.67■□□□□ 0.1
SRSF4-202ENST00000466448 ADCK1Q86TW2 530 aa15.67■□□□□ 0.1
SRSF4-202ENST00000466448 C19orf18Q8NEA5 215 aa15.67■□□□□ 0.1
SRSF4-202ENST00000466448 GJC3Q8NFK1 279 aa15.67■□□□□ 0.1
SRSF4-202ENST00000466448 OR4F5Q8NH21 305 aa15.67■□□□□ 0.1
SRSF4-202ENST00000466448 SLC7A13Q8TCU3 470 aa15.67■□□□□ 0.1
SRSF4-202ENST00000466448 TSSK2Q96PF2 358 aa15.67■□□□□ 0.1
SRSF4-202ENST00000466448 GPX7Q96SL4 187 aaPredicted RBP15.67■□□□□ 0.1
SRSF4-202ENST00000466448 COQ7Q99807 217 aa15.67■□□□□ 0.1
SRSF4-202ENST00000466448 CHIAQ9BZP6 476 aa15.67■□□□□ 0.1
SRSF4-202ENST00000466448 ANKRD19PQ9H560 264 aa15.67■□□□□ 0.1
SRSF4-202ENST00000466448 TMEM100Q9NV29 134 aa15.67■□□□□ 0.1
SRSF4-202ENST00000466448 TMEM5Q9Y2B1 443 aa15.67■□□□□ 0.1
SRSF4-202ENST00000466448 DCTN6O00399 190 aa15.66■□□□□ 0.1
SRSF4-202ENST00000466448 CXCR6O00574 342 aa15.66■□□□□ 0.1
SRSF4-202ENST00000466448 CDKN2AP42771 156 aaKnown RBP15.66■□□□□ 0.1
SRSF4-202ENST00000466448 FXYD6P3P58550 94 aa15.66■□□□□ 0.1
SRSF4-202ENST00000466448 RSPO1Q2MKA7 263 aaPredicted RBP15.66■□□□□ 0.1
SRSF4-202ENST00000466448 RUSC1-AS1Q66K80 236 aa15.66■□□□□ 0.1
SRSF4-202ENST00000466448 CORO6Q6QEF8 472 aa15.66■□□□□ 0.1
SRSF4-202ENST00000466448 Q6YL49 198 aa15.66■□□□□ 0.1
SRSF4-202ENST00000466448 COLCA1Q6ZS62 124 aa15.66■□□□□ 0.1
SRSF4-202ENST00000466448 FKBP9P1Q75LS8 142 aa15.66■□□□□ 0.1
SRSF4-202ENST00000466448 CBLL1Q75N03 491 aa15.66■□□□□ 0.1
SRSF4-202ENST00000466448 Q8TCH9 128 aa15.66■□□□□ 0.1
SRSF4-202ENST00000466448 RCN3Q96D15 328 aa15.66■□□□□ 0.1
SRSF4-202ENST00000466448 NOX4Q9NPH5 578 aa15.66■□□□□ 0.1
SRSF4-202ENST00000466448 C1RLQ9NZP8 487 aa15.66■□□□□ 0.1
SRSF4-202ENST00000466448 IER3IP1Q9Y5U9 82 aa15.66■□□□□ 0.1
SRSF4-202ENST00000466448 ENSAO43768 121 aaKnown RBP15.65■□□□□ 0.1
SRSF4-202ENST00000466448 CRYBA1P05813 215 aa15.65■□□□□ 0.1
SRSF4-202ENST00000466448 SFTPBP07988 381 aa15.65■□□□□ 0.1
SRSF4-202ENST00000466448 IRF2P14316 349 aa15.65■□□□□ 0.1
SRSF4-202ENST00000466448 PSMB10P40306 273 aa15.65■□□□□ 0.1
SRSF4-202ENST00000466448 CENPAP49450 140 aa15.65■□□□□ 0.1
SRSF4-202ENST00000466448 BPIFB3P59826 476 aa15.65■□□□□ 0.1
SRSF4-202ENST00000466448 HOXA4Q00056 320 aaPredicted RBP15.65■□□□□ 0.1
SRSF4-202ENST00000466448 LIPEQ05469 1076 aa15.65■□□□□ 0.1
SRSF4-202ENST00000466448 COX10Q12887 443 aa15.65■□□□□ 0.1
SRSF4-202ENST00000466448 GK2Q14410 553 aaPredicted RBP15.65■□□□□ 0.1
SRSF4-202ENST00000466448 CLEC12AQ5QGZ9 265 aa15.65■□□□□ 0.1
SRSF4-202ENST00000466448 SLC15A3Q8IY34 581 aa15.65■□□□□ 0.1
SRSF4-202ENST00000466448 CELF2-AS1Q8N7Q2 184 aa15.65■□□□□ 0.1
SRSF4-202ENST00000466448 RSRC1Q96IZ7 334 aaKnown RBP15.65■□□□□ 0.1
SRSF4-202ENST00000466448 CITED1Q99966 193 aa15.65■□□□□ 0.1
SRSF4-202ENST00000466448 PCGF1Q9BSM1 259 aa15.65■□□□□ 0.1
SRSF4-202ENST00000466448 HCAR1Q9BXC0 346 aa15.65■□□□□ 0.1
SRSF4-202ENST00000466448 RPS6KA6Q9UK32 745 aa15.65■□□□□ 0.1
SRSF4-202ENST00000466448 TMCC3Q9ULS5 477 aa15.65■□□□□ 0.1
SRSF4-202ENST00000466448 IGLV1-36A0A0B4J1U3 117 aa15.64■□□□□ 0.09
SRSF4-202ENST00000466448 FAM20BO75063 409 aa15.64■□□□□ 0.09
SRSF4-202ENST00000466448 NDUFA7O95182 113 aa15.64■□□□□ 0.09
SRSF4-202ENST00000466448 TXNDC12O95881 172 aa15.64■□□□□ 0.09
SRSF4-202ENST00000466448 SERPINA1P01009 418 aa15.64■□□□□ 0.09
SRSF4-202ENST00000466448 MELTFP08582 738 aa15.64■□□□□ 0.09
SRSF4-202ENST00000466448 TROVE2P10155 538 aaKnown RBP eCLIP15.64■□□□□ 0.091e-8■■■■■ 39.8
SRSF4-202ENST00000466448 OMPP47874 163 aa15.64■□□□□ 0.09
SRSF4-202ENST00000466448 RAD23AP54725 363 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms