RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 FAM162AQ96A26 154 aa17.2■□□□□ 0.34
COL6A1-203ENST00000466285 C7orf34Q96L11 122 aa17.2■□□□□ 0.34
COL6A1-203ENST00000466285 SLC30A2Q9BRI3 323 aa17.2■□□□□ 0.34
COL6A1-203ENST00000466285 WACQ9BTA9 647 aa17.2■□□□□ 0.34
COL6A1-203ENST00000466285 MED4Q9NPJ6 270 aa17.2■□□□□ 0.34
COL6A1-203ENST00000466285 TMEM5Q9Y2B1 443 aa17.2■□□□□ 0.34
COL6A1-203ENST00000466285 POLR1DQ9Y2S0 133 aa17.2■□□□□ 0.34
COL6A1-203ENST00000466285 V9GYQ6 96 aa17.2■□□□□ 0.34
COL6A1-203ENST00000466285 A0A1W2PRQ8 180 aa17.19■□□□□ 0.34
COL6A1-203ENST00000466285 C22orf46C9J442 243 aa17.19■□□□□ 0.34
COL6A1-203ENST00000466285 AHCYL1O43865 530 aa17.19■□□□□ 0.34
COL6A1-203ENST00000466285 TXNDC12O95881 172 aa17.19■□□□□ 0.34
COL6A1-203ENST00000466285 CENPAP49450 140 aa17.19■□□□□ 0.34
COL6A1-203ENST00000466285 SRSF4Q08170 494 aaKnown RBP17.19■□□□□ 0.34
COL6A1-203ENST00000466285 DGCR6Q14129 220 aa17.19■□□□□ 0.34
COL6A1-203ENST00000466285 ZNF404Q494X3 552 aa17.19■□□□□ 0.34
COL6A1-203ENST00000466285 SHISA2Q6UWI4 295 aa17.19■□□□□ 0.34
COL6A1-203ENST00000466285 OR52E2Q8NGJ4 325 aa17.19■□□□□ 0.34
COL6A1-203ENST00000466285 OR52J3Q8NH60 311 aa17.19■□□□□ 0.34
COL6A1-203ENST00000466285 RP9Q8TA86 221 aaKnown RBP17.19■□□□□ 0.34
COL6A1-203ENST00000466285 UPRTQ96BW1 309 aa17.19■□□□□ 0.34
COL6A1-203ENST00000466285 ANKRD19PQ9H560 264 aa17.19■□□□□ 0.34
COL6A1-203ENST00000466285 PNRC2Q9NPJ4 139 aaKnown RBP17.19■□□□□ 0.34
COL6A1-203ENST00000466285 RPS6KA6Q9UK32 745 aa17.19■□□□□ 0.34
COL6A1-203ENST00000466285 TGP01266 2768 aa17.18■□□□□ 0.34
COL6A1-203ENST00000466285 VWFP04275 2813 aa17.18■□□□□ 0.34
COL6A1-203ENST00000466285 A0A1B0GWJ7 208 aa17.18■□□□□ 0.34
COL6A1-203ENST00000466285 UNC119BA6NIH7 251 aa17.18■□□□□ 0.34
COL6A1-203ENST00000466285 IQCF6A8MYZ5 107 aa17.18■□□□□ 0.34
COL6A1-203ENST00000466285 NUDT2P50583 147 aa17.18■□□□□ 0.34
COL6A1-203ENST00000466285 MAB21L1Q13394 359 aa17.18■□□□□ 0.34
COL6A1-203ENST00000466285 RUSC1-AS1Q66K80 236 aa17.18■□□□□ 0.34
COL6A1-203ENST00000466285 GPR139Q6DWJ6 353 aa17.18■□□□□ 0.34
COL6A1-203ENST00000466285 ADCK1Q86TW2 530 aa17.18■□□□□ 0.34
COL6A1-203ENST00000466285 OR6V1Q8N148 313 aa17.18■□□□□ 0.34
COL6A1-203ENST00000466285 MUC20Q8N307 709 aaPredicted RBP17.18■□□□□ 0.34
COL6A1-203ENST00000466285 RNF148Q8N7C7 305 aa17.18■□□□□ 0.34
COL6A1-203ENST00000466285 SLC26A10Q8NG04 563 aa17.18■□□□□ 0.34
COL6A1-203ENST00000466285 APOBEC3DQ96AK3 386 aaPredicted RBP17.18■□□□□ 0.34
COL6A1-203ENST00000466285 DHRS1Q96LJ7 313 aa17.18■□□□□ 0.34
COL6A1-203ENST00000466285 COQ7Q99807 217 aa17.18■□□□□ 0.34
COL6A1-203ENST00000466285 KCTD14Q9BQ13 255 aaPredicted RBP17.18■□□□□ 0.34
COL6A1-203ENST00000466285 MS4A7Q9GZW8 240 aaPredicted RBP17.18■□□□□ 0.34
COL6A1-203ENST00000466285 ZNF696Q9H7X3 374 aa17.18■□□□□ 0.34
COL6A1-203ENST00000466285 ABCD2Q9UBJ2 740 aa17.18■□□□□ 0.34
COL6A1-203ENST00000466285 CTSZQ9UBR2 303 aa17.18■□□□□ 0.34
COL6A1-203ENST00000466285 ATPIF1Q9UII2 106 aa17.18■□□□□ 0.34
COL6A1-203ENST00000466285 SLC22A2O15244 555 aa17.17■□□□□ 0.34
COL6A1-203ENST00000466285 SURF4O15260 269 aa17.17■□□□□ 0.34
COL6A1-203ENST00000466285 FCN3O75636 299 aa17.17■□□□□ 0.34
COL6A1-203ENST00000466285 ACSM4P0C7M7 580 aa17.17■□□□□ 0.34
COL6A1-203ENST00000466285 TUBG1P23258 451 aa17.17■□□□□ 0.34
COL6A1-203ENST00000466285 RPS27P42677 84 aaKnown RBP17.17■□□□□ 0.34
COL6A1-203ENST00000466285 GNB2P62879 340 aa17.17■□□□□ 0.34
COL6A1-203ENST00000466285 COX10Q12887 443 aa17.17■□□□□ 0.34
COL6A1-203ENST00000466285 GK2Q14410 553 aaPredicted RBP17.17■□□□□ 0.34
COL6A1-203ENST00000466285 MPPED2Q15777 294 aa17.17■□□□□ 0.34
COL6A1-203ENST00000466285 CLEC12AQ5QGZ9 265 aa17.17■□□□□ 0.34
COL6A1-203ENST00000466285 SLC18B1Q6NT16 456 aa17.17■□□□□ 0.34
COL6A1-203ENST00000466285 LYPD4Q6UWN0 246 aa17.17■□□□□ 0.34
COL6A1-203ENST00000466285 COLCA1Q6ZS62 124 aa17.17■□□□□ 0.34
COL6A1-203ENST00000466285 C9orf139Q6ZV77 190 aa17.17■□□□□ 0.34
COL6A1-203ENST00000466285 FITM2Q8N6M3 262 aa17.17■□□□□ 0.34
COL6A1-203ENST00000466285 FANK1Q8TC84 345 aa17.17■□□□□ 0.34
COL6A1-203ENST00000466285 ZNF582Q96NG8 517 aaPredicted RBP17.17■□□□□ 0.34
COL6A1-203ENST00000466285 NMNAT3Q96T66 252 aa17.17■□□□□ 0.34
COL6A1-203ENST00000466285 HDHD2Q9H0R4 259 aa17.17■□□□□ 0.34
COL6A1-203ENST00000466285 TUBG2Q9NRH3 451 aa17.17■□□□□ 0.34
COL6A1-203ENST00000466285 B9D1Q9UPM9 204 aa17.17■□□□□ 0.34
COL6A1-203ENST00000466285 FAM20BO75063 409 aa17.16■□□□□ 0.34
COL6A1-203ENST00000466285 PITPNBP48739 271 aa17.16■□□□□ 0.34
COL6A1-203ENST00000466285 RGS6P49758 472 aa17.16■□□□□ 0.34
COL6A1-203ENST00000466285 RAD23AP54725 363 aa17.16■□□□□ 0.34
COL6A1-203ENST00000466285 DEFB112Q30KQ8 113 aa17.16■□□□□ 0.34
COL6A1-203ENST00000466285 SLC27A4Q6P1M0 643 aa17.16■□□□□ 0.34
COL6A1-203ENST00000466285 ZNF841Q6ZN19 808 aa17.16■□□□□ 0.34
COL6A1-203ENST00000466285 DPY19L2P2Q6ZN68 376 aa17.16■□□□□ 0.34
COL6A1-203ENST00000466285 RRM2BQ7LG56 351 aa17.16■□□□□ 0.34
COL6A1-203ENST00000466285 CYP4Z1Q86W10 505 aa17.16■□□□□ 0.34
COL6A1-203ENST00000466285 OR10S1Q8NGN2 331 aa17.16■□□□□ 0.34
COL6A1-203ENST00000466285 OR13G1Q8NGZ3 307 aa17.16■□□□□ 0.34
COL6A1-203ENST00000466285 RAB40AQ8WXH6 277 aa17.16■□□□□ 0.34
COL6A1-203ENST00000466285 NEIL1Q96FI4 390 aaPredicted RBP17.16■□□□□ 0.34
COL6A1-203ENST00000466285 ERMAPQ96PL5 475 aaPredicted RBP17.16■□□□□ 0.34
COL6A1-203ENST00000466285 SRA1Q9HD15 236 aaKnown RBP17.16■□□□□ 0.34
COL6A1-203ENST00000466285 TNFRSF19Q9NS68 423 aa17.16■□□□□ 0.34
COL6A1-203ENST00000466285 UFSP2Q9NUQ7 469 aa17.16■□□□□ 0.34
COL6A1-203ENST00000466285 MRGBPQ9NV56 204 aa17.16■□□□□ 0.34
COL6A1-203ENST00000466285 HOXA3O43365 443 aaPredicted RBP17.15■□□□□ 0.34
COL6A1-203ENST00000466285 SEMG1P04279 462 aa17.15■□□□□ 0.34
COL6A1-203ENST00000466285 SFTPBP07988 381 aa17.15■□□□□ 0.34
COL6A1-203ENST00000466285 HIST1H1CP16403 213 aaKnown RBP17.15■□□□□ 0.34
COL6A1-203ENST00000466285 FPR3P25089 353 aa17.15■□□□□ 0.34
COL6A1-203ENST00000466285 GGT2P36268 569 aa17.15■□□□□ 0.34
COL6A1-203ENST00000466285 SRP9P49458 86 aaKnown RBP17.15■□□□□ 0.34
COL6A1-203ENST00000466285 FGF12P61328 243 aa17.15■□□□□ 0.34
COL6A1-203ENST00000466285 SMARCD3Q6STE5 483 aa17.15■□□□□ 0.34
COL6A1-203ENST00000466285 SDR9C7Q8NEX9 313 aa17.15■□□□□ 0.34
COL6A1-203ENST00000466285 OR4K13Q8NH42 304 aa17.15■□□□□ 0.34
COL6A1-203ENST00000466285 ZNRF4Q8WWF5 429 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms