RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 SLC9A3R1O14745 358 aaPredicted RBP1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 ZBTB5O15062 677 aa1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 CCNKO75909 580 aa1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 CCNB2O95067 398 aa1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 CCNE2O96020 404 aa1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 HLA-HP01893 362 aa1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 HBE1P02100 147 aa1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 EIF4EP06730 217 aaKnown RBP1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 ADRA2AP08913 450 aa1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 CLTAP09496 248 aa1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 OR8U9P0C7N5 309 aa1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 DUX4L2P0CJ85 424 aa1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 DUX4L3P0CJ86 424 aa1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 DUX4L5P0CJ88 424 aa1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 DUX4L6P0CJ89 424 aa1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 DUX4L7P0CJ90 424 aa1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 OR8G3PP0DMU2 310 aa1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 CELP19835 753 aa1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 GSTM3P21266 225 aa1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 USF1P22415 310 aaPredicted RBP1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 DTYMKP23919 212 aa1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 POLR2IP36954 125 aaKnown RBP1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 KIR3DL2P43630 455 aa1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 ATP5OP48047 213 aa1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 HCAR3P49019 387 aa1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 P2RX1P51575 399 aa1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 RPS23P62266 143 aaKnown RBP1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 ZNF816Q0VGE8 651 aaPredicted RBP1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 CDC20Q12834 499 aa1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 IFT88Q13099 833 aa1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 IL18Q14116 193 aa1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 PSMD5Q16401 504 aa1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 LY6EQ16553 131 aa1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 RNASE13Q5GAN3 156 aaKnown RBP1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 GCSAMLQ5JQS6 135 aa1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 FAM78AQ5JUQ0 283 aa1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 H3F3CQ6NXT2 135 aa1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 IGFL1Q6UW32 110 aa1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 SHISA6Q6ZSJ9 500 aa1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 PRSS58Q8IYP2 241 aa1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 ZNF561Q8N587 486 aa1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 ZNF709Q8N972 641 aa1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 OR4K5Q8NGD3 323 aa1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 OR10W1Q8NGF6 305 aa1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 OR6Q1Q8NGQ2 317 aa1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 ZNF461Q8TAF7 563 aa1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 FLYWCH2Q96CP2 140 aaKnown RBP1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 RBMXL1Q96E39 390 aaKnown RBP1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 BTN2A3PQ96KV6 586 aa1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 PRRC1Q96M27 445 aa1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 C18orf15Q96N68 181 aa1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 ZNF317Q96PQ6 595 aaPredicted RBP1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 GSDMAQ96QA5 445 aa1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 FOXC2Q99958 501 aa1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 MICU1Q9BPX6 476 aa1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 OSBPL11Q9BXB4 747 aa1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 UCK2Q9BZX2 261 aa1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 ZNF442Q9H7R0 627 aa1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 ACP6Q9NPH0 428 aa1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 MED4Q9NPJ6 270 aa1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 SIRT7Q9NRC8 400 aa1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 C8orf17Q9NRJ1 99 aa1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 SLC17A7Q9P2U7 560 aa1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 DUX4Q9UBX2 424 aa1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 TBC1D24Q9ULP9 559 aa1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 GAKO14976 1311 aa1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 PCDH11XQ9BZA7 1347 aa1.04□□□□□ -2.24
NUCKS1-202ENST00000464938 COL27A1Q8IZC6 1860 aaPredicted RBP1.03□□□□□ -2.24
NUCKS1-202ENST00000464938 IGHV3-72A0A0B4J1Y9 119 aa1.03□□□□□ -2.24
NUCKS1-202ENST00000464938 OR6C74A6NCV1 312 aa1.03□□□□□ -2.24
NUCKS1-202ENST00000464938 KRBOX1C9JBD0 128 aa1.03□□□□□ -2.24
NUCKS1-202ENST00000464938 L7N2F9 121 aa1.03□□□□□ -2.24
NUCKS1-202ENST00000464938 M0R3G1 203 aa1.03□□□□□ -2.24
NUCKS1-202ENST00000464938 TNFRSF11BO00300 401 aa1.03□□□□□ -2.24
NUCKS1-202ENST00000464938 NME4O00746 187 aa1.03□□□□□ -2.24
NUCKS1-202ENST00000464938 BCKDKO14874 412 aa1.03□□□□□ -2.24
NUCKS1-202ENST00000464938 LSM1O15116 133 aaKnown RBP1.03□□□□□ -2.24
NUCKS1-202ENST00000464938 RAD51BO15315 384 aa1.03□□□□□ -2.24
NUCKS1-202ENST00000464938 GLSO94925 669 aaPredicted RBP1.03□□□□□ -2.24
NUCKS1-202ENST00000464938 VAMP5O95183 116 aa1.03□□□□□ -2.24
NUCKS1-202ENST00000464938 RCBTB2O95199 551 aa1.03□□□□□ -2.24
NUCKS1-202ENST00000464938 FGFR1OPO95684 399 aaKnown RBP1.03□□□□□ -2.24
NUCKS1-202ENST00000464938 LSM8O95777 96 aaKnown RBP1.03□□□□□ -2.24
NUCKS1-202ENST00000464938 HPRT1P00492 218 aa1.03□□□□□ -2.24
NUCKS1-202ENST00000464938 ASGR1P07306 291 aa1.03□□□□□ -2.24
NUCKS1-202ENST00000464938 TPM2P07951 284 aa1.03□□□□□ -2.24
NUCKS1-202ENST00000464938 POLR2MP0CAP2 368 aa1.03□□□□□ -2.24
NUCKS1-202ENST00000464938 ZNF286BP0CG31 522 aa1.03□□□□□ -2.24
NUCKS1-202ENST00000464938 PGA4P0DJD7 388 aa1.03□□□□□ -2.24
NUCKS1-202ENST00000464938 PGA3P0DJD8 388 aa1.03□□□□□ -2.24
NUCKS1-202ENST00000464938 PGA5P0DJD9 388 aa1.03□□□□□ -2.24
NUCKS1-202ENST00000464938 ANXA8P13928 327 aa1.03□□□□□ -2.24
NUCKS1-202ENST00000464938 CSNK2A2P19784 350 aaPredicted RBP1.03□□□□□ -2.24
NUCKS1-202ENST00000464938 BMI1P35226 326 aa1.03□□□□□ -2.24
NUCKS1-202ENST00000464938 RPS5P46782 204 aaKnown RBP1.03□□□□□ -2.24
NUCKS1-202ENST00000464938 SLC11A1P49279 550 aa1.03□□□□□ -2.24
NUCKS1-202ENST00000464938 FABP6P51161 128 aa1.03□□□□□ -2.24
NUCKS1-202ENST00000464938 CRADDP78560 199 aa1.03□□□□□ -2.24
NUCKS1-202ENST00000464938 IRF8Q02556 426 aa1.03□□□□□ -2.24
NUCKS1-202ENST00000464938 RAD51Q06609 339 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms