RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 SFRP4Q6FHJ7 346 aaPredicted RBP7.6□□□□□ -1.19
APP-213ENST00000464867 TIFABQ6ZNK6 161 aa7.6□□□□□ -1.19
APP-213ENST00000464867 HDDC2Q7Z4H3 204 aa7.6□□□□□ -1.19
APP-213ENST00000464867 CENPVQ7Z7K6 275 aaPredicted RBP7.6□□□□□ -1.19
APP-213ENST00000464867 Q8N2B8 174 aa7.6□□□□□ -1.19
APP-213ENST00000464867 BOLLQ8N9W6 283 aaKnown RBP7.6□□□□□ -1.19
APP-213ENST00000464867 CCDC63Q8NA47 563 aa7.6□□□□□ -1.19
APP-213ENST00000464867 OR8G5Q8NG78 346 aa7.6□□□□□ -1.19
APP-213ENST00000464867 OR51D1Q8NGF3 324 aa7.6□□□□□ -1.19
APP-213ENST00000464867 OR8J2Q8NGG1 315 aa7.6□□□□□ -1.19
APP-213ENST00000464867 WIPF2Q8TF74 440 aaPredicted RBP7.6□□□□□ -1.19
APP-213ENST00000464867 MZB1Q8WU39 189 aa7.6□□□□□ -1.19
APP-213ENST00000464867 SLC35B4Q969S0 331 aa7.6□□□□□ -1.19
APP-213ENST00000464867 DHRS1Q96LJ7 313 aa7.6□□□□□ -1.19
APP-213ENST00000464867 MOGAT1Q96PD6 335 aa7.6□□□□□ -1.19
APP-213ENST00000464867 NUF2Q9BZD4 464 aa7.6□□□□□ -1.19
APP-213ENST00000464867 SMURF1Q9HCE7 757 aa7.6□□□□□ -1.19
APP-213ENST00000464867 NINJ2Q9NZG7 142 aa7.6□□□□□ -1.19
APP-213ENST00000464867 P2RX2Q9UBL9 471 aa7.6□□□□□ -1.19
APP-213ENST00000464867 SAR1BQ9Y6B6 198 aa7.6□□□□□ -1.19
APP-213ENST00000464867 A0A1B0GWA3 101 aa7.59□□□□□ -1.19
APP-213ENST00000464867 NUDT19A8MXV4 375 aa7.59□□□□□ -1.19
APP-213ENST00000464867 MCIDASD6RGH6 385 aa7.59□□□□□ -1.19
APP-213ENST00000464867 LGALS8O00214 317 aa7.59□□□□□ -1.19
APP-213ENST00000464867 CHST1O43916 411 aa7.59□□□□□ -1.19
APP-213ENST00000464867 LHBP01229 141 aa7.59□□□□□ -1.19
APP-213ENST00000464867 HIST1H2ABP04908 130 aa7.59□□□□□ -1.19
APP-213ENST00000464867 ECHS1P30084 290 aa7.59□□□□□ -1.19
APP-213ENST00000464867 CDAP32320 146 aa7.59□□□□□ -1.19
APP-213ENST00000464867 PMELP40967 661 aa7.59□□□□□ -1.19
APP-213ENST00000464867 NCALDP61601 193 aa7.59□□□□□ -1.19
APP-213ENST00000464867 CNN3Q15417 329 aaKnown RBP7.59□□□□□ -1.19
APP-213ENST00000464867 CRIP3Q6Q6R5 217 aa7.59□□□□□ -1.19
APP-213ENST00000464867 ZDHHC24Q6UX98 284 aa7.59□□□□□ -1.19
APP-213ENST00000464867 HIST3H2AQ7L7L0 130 aa7.59□□□□□ -1.19
APP-213ENST00000464867 PIGWQ7Z7B1 504 aa7.59□□□□□ -1.19
APP-213ENST00000464867 PNKDQ8N490 385 aa7.59□□□□□ -1.19
APP-213ENST00000464867 CLDN22Q8N7P3 220 aa7.59□□□□□ -1.19
APP-213ENST00000464867 LSMEM1Q8N8F7 131 aa7.59□□□□□ -1.19
APP-213ENST00000464867 LINC00482Q8N8I6 264 aa7.59□□□□□ -1.19
APP-213ENST00000464867 OR5L1Q8NGL2 311 aa7.59□□□□□ -1.19
APP-213ENST00000464867 Q8TCH9 128 aa7.59□□□□□ -1.19
APP-213ENST00000464867 RORBQ92753 470 aa7.59□□□□□ -1.19
APP-213ENST00000464867 HIST1H2ACQ93077 130 aa7.59□□□□□ -1.19
APP-213ENST00000464867 ISOC1Q96CN7 298 aa7.59□□□□□ -1.19
APP-213ENST00000464867 ZNF347Q96SE7 839 aa7.59□□□□□ -1.19
APP-213ENST00000464867 FUT8Q9BYC5 575 aa7.59□□□□□ -1.19
APP-213ENST00000464867 WNT5BQ9H1J7 359 aa7.59□□□□□ -1.19
APP-213ENST00000464867 MEGF9Q9H1U4 602 aa7.59□□□□□ -1.19
APP-213ENST00000464867 MUC13Q9H3R2 512 aa7.59□□□□□ -1.19
APP-213ENST00000464867 TMEM100Q9NV29 134 aa7.59□□□□□ -1.19
APP-213ENST00000464867 RNF7Q9UBF6 113 aa7.59□□□□□ -1.19
APP-213ENST00000464867 SF3B6Q9Y3B4 125 aaKnown RBP7.59□□□□□ -1.19
APP-213ENST00000464867 WDR91A4D1P6 747 aa7.58□□□□□ -1.2
APP-213ENST00000464867 GMNCA6NCL1 334 aa7.58□□□□□ -1.2
APP-213ENST00000464867 CENPBD1B2RD01 187 aa7.58□□□□□ -1.2
APP-213ENST00000464867 FAM20BO75063 409 aa7.58□□□□□ -1.2
APP-213ENST00000464867 KRT75O95678 551 aa7.58□□□□□ -1.2
APP-213ENST00000464867 FGF4P08620 206 aa7.58□□□□□ -1.2
APP-213ENST00000464867 NR2C1P13056 603 aa7.58□□□□□ -1.2
APP-213ENST00000464867 HTR5AP47898 357 aa7.58□□□□□ -1.2
APP-213ENST00000464867 BMXP51813 675 aa7.58□□□□□ -1.2
APP-213ENST00000464867 PRB3Q04118 309 aaPredicted RBP7.58□□□□□ -1.2
APP-213ENST00000464867 KLRD1Q13241 179 aa7.58□□□□□ -1.2
APP-213ENST00000464867 BLMHQ13867 455 aa7.58□□□□□ -1.2
APP-213ENST00000464867 HIST3H3Q16695 136 aa7.58□□□□□ -1.2
APP-213ENST00000464867 CCDC153Q494R4 210 aa7.58□□□□□ -1.2
APP-213ENST00000464867 C10orf128Q5T292 105 aa7.58□□□□□ -1.2
APP-213ENST00000464867 FAM27BQ5VT28 67 aa7.58□□□□□ -1.2
APP-213ENST00000464867 C1orf94Q6P1W5 598 aa7.58□□□□□ -1.2
APP-213ENST00000464867 CNPY4Q8N129 248 aa7.58□□□□□ -1.2
APP-213ENST00000464867 CELF2-AS1Q8N7Q2 184 aa7.58□□□□□ -1.2
APP-213ENST00000464867 NOXO1Q8NFA2 376 aa7.58□□□□□ -1.2
APP-213ENST00000464867 OR4X2Q8NGF9 303 aa7.58□□□□□ -1.2
APP-213ENST00000464867 ACMSDQ8TDX5 336 aa7.58□□□□□ -1.2
APP-213ENST00000464867 TEX37Q96LM6 180 aa7.58□□□□□ -1.2
APP-213ENST00000464867 CPPED1Q9BRF8 314 aaPredicted RBP7.58□□□□□ -1.2
APP-213ENST00000464867 CDCA4Q9BXL8 241 aa7.58□□□□□ -1.2
APP-213ENST00000464867 POFUT1Q9H488 388 aa7.58□□□□□ -1.2
APP-213ENST00000464867 TMEM27Q9HBJ8 222 aa7.58□□□□□ -1.2
APP-213ENST00000464867 UFSP2Q9NUQ7 469 aa7.58□□□□□ -1.2
APP-213ENST00000464867 STX18Q9P2W9 335 aaKnown RBP7.58□□□□□ -1.2
APP-213ENST00000464867 STARD10Q9Y365 291 aa7.58□□□□□ -1.2
APP-213ENST00000464867 A0A0G2JPF8 293 aa7.57□□□□□ -1.2
APP-213ENST00000464867 A0A1W2PRG6 482 aa7.57□□□□□ -1.2
APP-213ENST00000464867 OOEPA6NGQ2 149 aa7.57□□□□□ -1.2
APP-213ENST00000464867 CCDC154A6NI56 674 aa7.57□□□□□ -1.2
APP-213ENST00000464867 C12orf71A8MTZ7 269 aa7.57□□□□□ -1.2
APP-213ENST00000464867 HNRNPCL2B2RXH8 293 aa7.57□□□□□ -1.2
APP-213ENST00000464867 HNRNPCL3B7ZW38 293 aa7.57□□□□□ -1.2
APP-213ENST00000464867 LRRN3E7EW58 273 aa7.57□□□□□ -1.2
APP-213ENST00000464867 SYNGR1O43759 233 aa7.57□□□□□ -1.2
APP-213ENST00000464867 HNRNPCL1O60812 293 aaKnown RBP7.57□□□□□ -1.2
APP-213ENST00000464867 GLRA3O75311 464 aa7.57□□□□□ -1.2
APP-213ENST00000464867 GYPAP02724 150 aa7.57□□□□□ -1.2
APP-213ENST00000464867 BCHEP06276 602 aa7.57□□□□□ -1.2
APP-213ENST00000464867 CST2P09228 141 aa7.57□□□□□ -1.2
APP-213ENST00000464867 HNRNPCL4P0DMR1 293 aa7.57□□□□□ -1.2
APP-213ENST00000464867 CPA3P15088 417 aa7.57□□□□□ -1.2
APP-213ENST00000464867 FPR3P25089 353 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms