RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 CD276Q5ZPR3 534 aa12.13□□□□□ -0.47
MCF2L-220ENST00000464800 ERICH5Q6P6B1 374 aa12.13□□□□□ -0.47
MCF2L-220ENST00000464800 ZNF841Q6ZN19 808 aa12.13□□□□□ -0.47
MCF2L-220ENST00000464800 NRMQ8IXM6 262 aa12.13□□□□□ -0.47
MCF2L-220ENST00000464800 ZNF583Q96ND8 569 aa12.13□□□□□ -0.47
MCF2L-220ENST00000464800 TBX15Q96SF7 602 aa12.13□□□□□ -0.47
MCF2L-220ENST00000464800 MMADHCQ9H3L0 296 aaPredicted RBP12.13□□□□□ -0.47
MCF2L-220ENST00000464800 ACOXLQ9NUZ1 547 aa12.13□□□□□ -0.47
MCF2L-220ENST00000464800 ADAM18Q9Y3Q7 739 aa12.13□□□□□ -0.47
MCF2L-220ENST00000464800 TET2Q6N021 2002 aaPredicted RBP12.12□□□□□ -0.47
MCF2L-220ENST00000464800 CENPVL3A0A0U1RRI6 287 aa12.12□□□□□ -0.47
MCF2L-220ENST00000464800 PRSS37A4D1T9 235 aa12.12□□□□□ -0.47
MCF2L-220ENST00000464800 IGHV4-59P01825 116 aa12.12□□□□□ -0.47
MCF2L-220ENST00000464800 LIPFP07098 398 aa12.12□□□□□ -0.47
MCF2L-220ENST00000464800 MMP9P14780 707 aa12.12□□□□□ -0.47
MCF2L-220ENST00000464800 FPR3P25089 353 aa12.12□□□□□ -0.47
MCF2L-220ENST00000464800 KDELR2P33947 212 aa12.12□□□□□ -0.47
MCF2L-220ENST00000464800 PSMB10P40306 273 aa12.12□□□□□ -0.47
MCF2L-220ENST00000464800 PMELP40967 661 aa12.12□□□□□ -0.47
MCF2L-220ENST00000464800 SLC9A3P48764 834 aa12.12□□□□□ -0.47
MCF2L-220ENST00000464800 LSM6P62312 80 aaKnown RBP12.12□□□□□ -0.47
MCF2L-220ENST00000464800 LRRC23Q53EV4 343 aaPredicted RBP12.12□□□□□ -0.47
MCF2L-220ENST00000464800 CCDC92Q53HC0 331 aaPredicted RBP12.12□□□□□ -0.47
MCF2L-220ENST00000464800 METTL11BQ5VVY1 283 aa12.12□□□□□ -0.47
MCF2L-220ENST00000464800 OTPQ5XKR4 325 aa12.12□□□□□ -0.47
MCF2L-220ENST00000464800 HIST2H2BDQ6DRA6 164 aa12.12□□□□□ -0.47
MCF2L-220ENST00000464800 GLB1L2Q8IW92 636 aa12.12□□□□□ -0.47
MCF2L-220ENST00000464800 SCCPDHQ8NBX0 429 aa12.12□□□□□ -0.47
MCF2L-220ENST00000464800 C19orf18Q8NEA5 215 aa12.12□□□□□ -0.47
MCF2L-220ENST00000464800 FAM110DQ8TAY7 271 aaPredicted RBP12.12□□□□□ -0.47
MCF2L-220ENST00000464800 Q8TCH9 128 aa12.12□□□□□ -0.47
MCF2L-220ENST00000464800 TPD52L3Q96J77 140 aa12.12□□□□□ -0.47
MCF2L-220ENST00000464800 Q96M85 177 aa12.12□□□□□ -0.47
MCF2L-220ENST00000464800 ZNF570Q96NI8 536 aa12.12□□□□□ -0.47
MCF2L-220ENST00000464800 WDFY2Q96P53 400 aa12.12□□□□□ -0.47
MCF2L-220ENST00000464800 NDEL1Q9GZM8 345 aa12.12□□□□□ -0.47
MCF2L-220ENST00000464800 TMEM100Q9NV29 134 aa12.12□□□□□ -0.47
MCF2L-220ENST00000464800 TMCC3Q9ULS5 477 aa12.12□□□□□ -0.47
MCF2L-220ENST00000464800 A4GNTQ9UNA3 340 aa12.12□□□□□ -0.47
MCF2L-220ENST00000464800 POLR1DQ9Y2S0 133 aa12.12□□□□□ -0.47
MCF2L-220ENST00000464800 IGHV1-69DA0A0B4J2H0 117 aa12.11□□□□□ -0.47
MCF2L-220ENST00000464800 A0A1B0GWJ7 208 aa12.11□□□□□ -0.47
MCF2L-220ENST00000464800 MRASO14807 208 aa12.11□□□□□ -0.47
MCF2L-220ENST00000464800 RER1O15258 196 aa12.11□□□□□ -0.47
MCF2L-220ENST00000464800 FAM20BO75063 409 aa12.11□□□□□ -0.47
MCF2L-220ENST00000464800 NPPAP01160 153 aa12.11□□□□□ -0.47
MCF2L-220ENST00000464800 IGHV1-69P01742 117 aa12.11□□□□□ -0.47
MCF2L-220ENST00000464800 HLA-DPB1P04440 258 aa12.11□□□□□ -0.47
MCF2L-220ENST00000464800 CD14P08571 375 aa12.11□□□□□ -0.47
MCF2L-220ENST00000464800 PRKCDQ05655 676 aa12.11□□□□□ -0.47
MCF2L-220ENST00000464800 KCNJ8Q15842 424 aa12.11□□□□□ -0.47
MCF2L-220ENST00000464800 FBLN7Q53RD9 439 aa12.11□□□□□ -0.47
MCF2L-220ENST00000464800 COQ5Q5HYK3 327 aa12.11□□□□□ -0.47
MCF2L-220ENST00000464800 GDPGP1Q6ZNW5 385 aa12.11□□□□□ -0.47
MCF2L-220ENST00000464800 LDLRAD3Q86YD5 345 aa12.11□□□□□ -0.47
MCF2L-220ENST00000464800 OFCC1Q8IZS5 231 aa12.11□□□□□ -0.47
MCF2L-220ENST00000464800 CELF2-AS1Q8N7Q2 184 aa12.11□□□□□ -0.47
MCF2L-220ENST00000464800 PNLDC1Q8NA58 520 aaKnown RBP12.11□□□□□ -0.47
MCF2L-220ENST00000464800 FAM156AQ8NDB6 213 aa12.11□□□□□ -0.47
MCF2L-220ENST00000464800 ERGIC1Q969X5 290 aa12.11□□□□□ -0.47
MCF2L-220ENST00000464800 HCAR1Q9BXC0 346 aa12.11□□□□□ -0.47
MCF2L-220ENST00000464800 TMEM120AQ9BXJ8 343 aa12.11□□□□□ -0.47
MCF2L-220ENST00000464800 HDHD2Q9H0R4 259 aa12.11□□□□□ -0.47
MCF2L-220ENST00000464800 RERGLQ9H628 205 aa12.11□□□□□ -0.47
MCF2L-220ENST00000464800 WDR76Q9H967 626 aa12.11□□□□□ -0.47
MCF2L-220ENST00000464800 ERVK-18Q9QC07 812 aa12.11□□□□□ -0.47
MCF2L-220ENST00000464800 CTSZQ9UBR2 303 aa12.11□□□□□ -0.47
MCF2L-220ENST00000464800 ELOVL7A1L3X0 281 aa12.1□□□□□ -0.47
MCF2L-220ENST00000464800 SLC16A7O60669 478 aa12.1□□□□□ -0.47
MCF2L-220ENST00000464800 KHDRBS3O75525 346 aaKnown RBP12.1□□□□□ -0.47
MCF2L-220ENST00000464800 FUT4P22083 530 aa12.1□□□□□ -0.47
MCF2L-220ENST00000464800 CD200P41217 278 aa12.1□□□□□ -0.47
MCF2L-220ENST00000464800 IER3P46695 156 aa12.1□□□□□ -0.47
MCF2L-220ENST00000464800 YAP1P46937 504 aaKnown RBP12.1□□□□□ -0.47
MCF2L-220ENST00000464800 SELENOWP63302 87 aa12.1□□□□□ -0.47
MCF2L-220ENST00000464800 MAB21L1Q13394 359 aa12.1□□□□□ -0.47
MCF2L-220ENST00000464800 KRR1Q13601 381 aaKnown RBP12.1□□□□□ -0.47
MCF2L-220ENST00000464800 CLEC12AQ5QGZ9 265 aa12.1□□□□□ -0.47
MCF2L-220ENST00000464800 LRTOMTQ8WZ04 291 aa12.1□□□□□ -0.47
MCF2L-220ENST00000464800 LHX4Q969G2 390 aa12.1□□□□□ -0.47
MCF2L-220ENST00000464800 COQ7Q99807 217 aa12.1□□□□□ -0.47
MCF2L-220ENST00000464800 FNDC11Q9BVV2 318 aa12.1□□□□□ -0.47
MCF2L-220ENST00000464800 SYT4Q9H2B2 425 aa12.1□□□□□ -0.47
MCF2L-220ENST00000464800 DPAGT1Q9H3H5 408 aa12.1□□□□□ -0.47
MCF2L-220ENST00000464800 UFSP2Q9NUQ7 469 aa12.1□□□□□ -0.47
MCF2L-220ENST00000464800 RHCGQ9UBD6 479 aa12.1□□□□□ -0.47
MCF2L-220ENST00000464800 COA3Q9Y2R0 106 aaPredicted RBP12.1□□□□□ -0.47
MCF2L-220ENST00000464800 A0A0U1RQK1 487 aa12.09□□□□□ -0.47
MCF2L-220ENST00000464800 LOC100653049A0A140TA62 436 aa12.09□□□□□ -0.47
MCF2L-220ENST00000464800 BBIP1A8MTZ0 92 aa12.09□□□□□ -0.47
MCF2L-220ENST00000464800 C3orf80F5H4A9 247 aa12.09□□□□□ -0.47
MCF2L-220ENST00000464800 KRT34O76011 436 aa12.09□□□□□ -0.47
MCF2L-220ENST00000464800 ALX3O95076 343 aa12.09□□□□□ -0.47
MCF2L-220ENST00000464800 GPR4P46093 362 aa12.09□□□□□ -0.47
MCF2L-220ENST00000464800 RAD23AP54725 363 aa12.09□□□□□ -0.47
MCF2L-220ENST00000464800 PRSS12P56730 875 aa12.09□□□□□ -0.47
MCF2L-220ENST00000464800 KLF10Q13118 480 aa12.09□□□□□ -0.47
MCF2L-220ENST00000464800 TRAM2Q15035 370 aa12.09□□□□□ -0.47
MCF2L-220ENST00000464800 ZBED5Q49AG3 693 aa12.09□□□□□ -0.47
MCF2L-220ENST00000464800 PRAMEF6Q5VXH4 476 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms