RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 NFASCO94856 1347 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 CPDO75976 1380 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 INSRP06213 1382 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 RTL9Q8NET4 1388 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 SCN2AQ99250 2005 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 IGLV11-55A0A075B6I3 123 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 IGLV3-16A0A075B6K0 115 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 SMIM31A0A1B0GVY4 71 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 CIB4A0PJX0 185 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 FUOMA2VDF0 154 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 F6UB75 175 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 TMX2-CTNND1H3BSU7 103 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 H7C0C1 242 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 CBR3O75828 277 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 CDK14O94921 469 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 SEMA3DO95025 777 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 CCNB2O95067 398 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 PLEKHA8P1O95397 391 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 ATP6V1G2O95670 118 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 RAB3DO95716 219 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 SNAP29O95721 258 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 AGTP01019 485 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 FGF4P08620 206 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 HOXC4P09017 264 aaPredicted RBP2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 FAM228BP0C875 321 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 PCK1P35558 622 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 NAA10P41227 235 aaPredicted RBP2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 MAGEA1P43355 309 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 CEBPGP53567 150 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 CRISP3P54108 245 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 ATP6V0D1P61421 351 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 ACTA2P62736 377 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 ACTG2P63267 376 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 ACTC1P68032 377 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 ACTA1P68133 377 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 ADARB1P78563 741 aaKnown RBP2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 SLC7A9P82251 487 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 STX5Q13190 355 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 ART3Q13508 389 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 CLINT1Q14677 625 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 FAM83EQ2M2I3 478 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 YIF1BQ5BJH7 314 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 TEX30Q5JUR7 227 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 BRMS1LQ5PSV4 323 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 TSPO2Q5TGU0 170 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 CARD17Q5XLA6 110 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 KCTD16Q68DU8 428 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 SLC8B1Q6J4K2 584 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 ANKRD26P1Q6NSI1 321 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 TTC33Q6PID6 262 aaPredicted RBP2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 DEGS2Q6QHC5 323 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 METAP1DQ6UB28 335 aaPredicted RBP2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 LYPD2Q6UXB3 125 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 STRADAQ7RTN6 431 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 OAFQ86UD1 273 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 HORMAD1Q86X24 394 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 ZNF786Q8N393 782 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 OR6Q1Q8NGQ2 317 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 OR10R2Q8NGX6 335 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 RNASE11Q8TAA1 199 aaKnown RBP2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 GRPEL2Q8TAA5 225 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 LHFPL5Q8TAF8 219 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 MARCH1Q8TCQ1 289 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 KCTD4Q8WVF5 259 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 ELMO1Q92556 727 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 IL22RA2Q969J5 263 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 ZNF414Q96IQ9 312 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 ZBED3Q96IU2 234 aaPredicted RBP2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 ATP5SQ99766 215 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 MTG1Q9BT17 334 aaPredicted RBP2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 CHID1Q9BWS9 393 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 TEKT3Q9BXF9 490 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 SLC17A9Q9BYT1 436 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 FRMD8P1Q9BZ68 369 aaPredicted RBP2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 MRPL37Q9BZE1 423 aaKnown RBP2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 LHX5Q9H2C1 402 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 LINC00597Q9H2U6 94 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 RPF2Q9H7B2 306 aaKnown RBP2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 METTL8Q9H825 291 aaKnown RBP2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 C19orf12Q9NSK7 152 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 ZNF223Q9UK11 482 aaPredicted RBP2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 DNAJC12Q9UKB3 198 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 ING4Q9UNL4 249 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 GOLT1BQ9Y3E0 138 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 HEY1Q9Y5J3 304 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 PHLPP2Q6ZVD8 1323 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 PCDH11XQ9BZA7 1347 aa2.37□□□□□ -2.03
HMGXB4-205ENST00000464480 ADCY9O60503 1353 aa2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 CNTNAP1P78357 1384 aa2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 USP47Q96K76 1375 aa2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 CLIP1P30622 1438 aa2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 SERTM2A0A1B0GWG4 89 aa2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 PLAC8L1A1L4L8 177 aa2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 EVPLLA8MZ36 301 aa2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 E5RI56 91 aa2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 RAB29O14966 203 aa2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 MRPS12O15235 138 aaKnown RBP2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 CLOCKO15516 846 aa2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 AKR7A2O43488 359 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms