RNA–Protein interactions for RNA: ENST00000464263.1

RAB11FIP3-208, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 329 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-208ENST00000464263 APOBEC3DQ96AK3 386 aaPredicted RBP13.17□□□□□ -0.3
RAB11FIP3-208ENST00000464263 EME1Q96AY2 570 aa13.17□□□□□ -0.3
RAB11FIP3-208ENST00000464263 HAVCR1Q96D42 359 aa13.17□□□□□ -0.3
RAB11FIP3-208ENST00000464263 COG8Q96MW5 612 aa13.17□□□□□ -0.3
RAB11FIP3-208ENST00000464263 AMELYQ99218 206 aa13.17□□□□□ -0.3
RAB11FIP3-208ENST00000464263 TOR3AQ9H497 397 aa13.17□□□□□ -0.3
RAB11FIP3-208ENST00000464263 DLL4Q9NR61 685 aa13.17□□□□□ -0.3
RAB11FIP3-208ENST00000464263 CENPMQ9NSP4 180 aa13.17□□□□□ -0.3
RAB11FIP3-208ENST00000464263 H2AFY2Q9P0M6 372 aaPredicted RBP13.17□□□□□ -0.3
RAB11FIP3-208ENST00000464263 ERICH4A6NGS2 130 aa13.16□□□□□ -0.3
RAB11FIP3-208ENST00000464263 ZNF878C9JN71 531 aa13.16□□□□□ -0.3
RAB11FIP3-208ENST00000464263 M0R135 149 aa13.16□□□□□ -0.3
RAB11FIP3-208ENST00000464263 NAT2P11245 290 aa13.16□□□□□ -0.3
RAB11FIP3-208ENST00000464263 CD99P14209 185 aa13.16□□□□□ -0.3
RAB11FIP3-208ENST00000464263 ALOX5APP20292 161 aa13.16□□□□□ -0.3
RAB11FIP3-208ENST00000464263 MMP15P51511 669 aa13.16□□□□□ -0.3
RAB11FIP3-208ENST00000464263 HCCSP53701 268 aa13.16□□□□□ -0.3
RAB11FIP3-208ENST00000464263 TPTEP56180 551 aa13.16□□□□□ -0.3
RAB11FIP3-208ENST00000464263 GGTLC2Q14390 218 aa13.16□□□□□ -0.3
RAB11FIP3-208ENST00000464263 RCN1Q15293 331 aa13.16□□□□□ -0.3
RAB11FIP3-208ENST00000464263 NKPD1Q17RQ9 610 aa13.16□□□□□ -0.3
RAB11FIP3-208ENST00000464263 ALKBH6Q3KRA9 238 aa13.16□□□□□ -0.3
RAB11FIP3-208ENST00000464263 SLC16A9Q7RTY1 509 aa13.16□□□□□ -0.3
RAB11FIP3-208ENST00000464263 ZNF454Q8N9F8 522 aa13.16□□□□□ -0.3
RAB11FIP3-208ENST00000464263 OR5L1Q8NGL2 311 aa13.16□□□□□ -0.3
RAB11FIP3-208ENST00000464263 OR8J1Q8NGP2 316 aa13.16□□□□□ -0.3
RAB11FIP3-208ENST00000464263 SPTSSAQ969W0 71 aa13.16□□□□□ -0.3
RAB11FIP3-208ENST00000464263 CMBLQ96DG6 245 aa13.16□□□□□ -0.3
RAB11FIP3-208ENST00000464263 ZNF799Q96GE5 643 aa13.16□□□□□ -0.3
RAB11FIP3-208ENST00000464263 KCNJ15Q99712 375 aa13.16□□□□□ -0.3
RAB11FIP3-208ENST00000464263 TPK1Q9H3S4 243 aa13.16□□□□□ -0.3
RAB11FIP3-208ENST00000464263 HAO2Q9NYQ3 351 aa13.16□□□□□ -0.3
RAB11FIP3-208ENST00000464263 GPR160Q9UJ42 338 aa13.16□□□□□ -0.3
RAB11FIP3-208ENST00000464263 KLHDC2Q9Y2U9 406 aa13.16□□□□□ -0.3
RAB11FIP3-208ENST00000464263 YLPM1P49750 1951 aaKnown RBP13.15□□□□□ -0.3
RAB11FIP3-208ENST00000464263 TRIM64A6NGJ6 449 aa13.15□□□□□ -0.3
RAB11FIP3-208ENST00000464263 TRIM64BA6NI03 449 aa13.15□□□□□ -0.3
RAB11FIP3-208ENST00000464263 C17orf100A8MU93 164 aa13.15□□□□□ -0.3
RAB11FIP3-208ENST00000464263 DLGAP1O14490 977 aa13.15□□□□□ -0.3
RAB11FIP3-208ENST00000464263 LCATP04180 440 aa13.15□□□□□ -0.3
RAB11FIP3-208ENST00000464263 RAC2P15153 192 aa13.15□□□□□ -0.3
RAB11FIP3-208ENST00000464263 KITLGP21583 273 aa13.15□□□□□ -0.3
RAB11FIP3-208ENST00000464263 NAA10P41227 235 aaPredicted RBP13.15□□□□□ -0.3
RAB11FIP3-208ENST00000464263 CDC42P60953 191 aa13.15□□□□□ -0.3
RAB11FIP3-208ENST00000464263 ELF3P78545 371 aaPredicted RBP13.15□□□□□ -0.3
RAB11FIP3-208ENST00000464263 LCN1P1Q5VSP4 162 aa13.15□□□□□ -0.3
RAB11FIP3-208ENST00000464263 DRAM2Q6UX65 266 aa13.15□□□□□ -0.3
RAB11FIP3-208ENST00000464263 FBXW12Q6X9E4 464 aa13.15□□□□□ -0.3
RAB11FIP3-208ENST00000464263 SPATC1Q76KD6 591 aa13.15□□□□□ -0.3
RAB11FIP3-208ENST00000464263 CIARTQ8N365 385 aaPredicted RBP13.15□□□□□ -0.3
RAB11FIP3-208ENST00000464263 ZNF525Q8N782 197 aa13.15□□□□□ -0.3
RAB11FIP3-208ENST00000464263 THEM6Q8WUY1 208 aa13.15□□□□□ -0.3
RAB11FIP3-208ENST00000464263 TRUB1Q8WWH5 349 aaKnown RBP13.15□□□□□ -0.3
RAB11FIP3-208ENST00000464263 GTF3AQ92664 365 aaKnown RBP13.15□□□□□ -0.3
RAB11FIP3-208ENST00000464263 COPS4Q9BT78 406 aa13.15□□□□□ -0.3
RAB11FIP3-208ENST00000464263 YIPF3Q9GZM5 350 aa13.15□□□□□ -0.3
RAB11FIP3-208ENST00000464263 PTTG3PQ9NZH4 202 aa13.15□□□□□ -0.3
RAB11FIP3-208ENST00000464263 CR1P17927 2039 aa13.15□□□□□ -0.3
RAB11FIP3-208ENST00000464263 C5orf63A6NC05 138 aa13.14□□□□□ -0.31
RAB11FIP3-208ENST00000464263 SLC22A31A6NKX4 558 aa13.14□□□□□ -0.31
RAB11FIP3-208ENST00000464263 LYNP07948 512 aa13.14□□□□□ -0.31
RAB11FIP3-208ENST00000464263 ERCC1P07992 297 aaPredicted RBP13.14□□□□□ -0.31
RAB11FIP3-208ENST00000464263 ANOS1P23352 680 aa13.14□□□□□ -0.31
RAB11FIP3-208ENST00000464263 LIPAP38571 399 aa13.14□□□□□ -0.31
RAB11FIP3-208ENST00000464263 OPRL1P41146 370 aa13.14□□□□□ -0.31
RAB11FIP3-208ENST00000464263 SLC15A1P46059 708 aa13.14□□□□□ -0.31
RAB11FIP3-208ENST00000464263 PRKXP51817 358 aa13.14□□□□□ -0.31
RAB11FIP3-208ENST00000464263 DSCR9P59020 149 aa13.14□□□□□ -0.31
RAB11FIP3-208ENST00000464263 GRB2P62993 217 aaKnown RBP13.14□□□□□ -0.31
RAB11FIP3-208ENST00000464263 HLXQ14774 488 aaPredicted RBP13.14□□□□□ -0.31
RAB11FIP3-208ENST00000464263 TAF13Q15543 124 aa13.14□□□□□ -0.31
RAB11FIP3-208ENST00000464263 SLC25A30Q5SVS4 291 aa13.14□□□□□ -0.31
RAB11FIP3-208ENST00000464263 LPCAT4Q643R3 524 aa13.14□□□□□ -0.31
RAB11FIP3-208ENST00000464263 GID4Q8IVV7 300 aa13.14□□□□□ -0.31
RAB11FIP3-208ENST00000464263 FAM81AQ8TBF8 368 aa13.14□□□□□ -0.31
RAB11FIP3-208ENST00000464263 ZNF582Q96NG8 517 aaPredicted RBP13.14□□□□□ -0.31
RAB11FIP3-208ENST00000464263 RHNO1Q9BSD3 238 aa13.14□□□□□ -0.31
RAB11FIP3-208ENST00000464263 FAM118AQ9NWS6 357 aa13.14□□□□□ -0.31
RAB11FIP3-208ENST00000464263 NKIRAS2Q9NYR9 191 aa13.14□□□□□ -0.31
RAB11FIP3-208ENST00000464263 PURGQ9UJV8 347 aaKnown RBP13.14□□□□□ -0.31
RAB11FIP3-208ENST00000464263 F8P00451 2351 aa13.13□□□□□ -0.31
RAB11FIP3-208ENST00000464263 IGHV4-30-2A0A087WSY4 118 aa13.13□□□□□ -0.31
RAB11FIP3-208ENST00000464263 H7C1Q1 480 aa13.13□□□□□ -0.31
RAB11FIP3-208ENST00000464263 HPXP02790 462 aa13.13□□□□□ -0.31
RAB11FIP3-208ENST00000464263 ADH4P08319 380 aa13.13□□□□□ -0.31
RAB11FIP3-208ENST00000464263 MRPL3P09001 348 aaKnown RBP13.13□□□□□ -0.31
RAB11FIP3-208ENST00000464263 DAOP14920 347 aa13.13□□□□□ -0.31
RAB11FIP3-208ENST00000464263 FOSL1P15407 271 aa13.13□□□□□ -0.31
RAB11FIP3-208ENST00000464263 HTR1FP30939 366 aa13.13□□□□□ -0.31
RAB11FIP3-208ENST00000464263 MAGEB1P43366 347 aa13.13□□□□□ -0.31
RAB11FIP3-208ENST00000464263 ZNF81P51508 661 aa13.13□□□□□ -0.31
RAB11FIP3-208ENST00000464263 SNRPGP62308 76 aaKnown RBP13.13□□□□□ -0.31
RAB11FIP3-208ENST00000464263 TRIP10Q15642 601 aa13.13□□□□□ -0.31
RAB11FIP3-208ENST00000464263 SNAI3Q3KNW1 292 aa13.13□□□□□ -0.31
RAB11FIP3-208ENST00000464263 CLEC2AQ6UVW9 174 aa13.13□□□□□ -0.31
RAB11FIP3-208ENST00000464263 PRSS45Q7RTY3 260 aa13.13□□□□□ -0.31
RAB11FIP3-208ENST00000464263 C10orf105Q8TEF2 133 aa13.13□□□□□ -0.31
RAB11FIP3-208ENST00000464263 UBASH3BQ8TF42 649 aa13.13□□□□□ -0.31
RAB11FIP3-208ENST00000464263 SNX33Q8WV41 574 aa13.13□□□□□ -0.31
RAB11FIP3-208ENST00000464263 FAM168AQ92567 244 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms