RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 SLAMF6Q96DU3 332 aa15.09■□□□□ 0.01
VPS52-214ENST00000463486 TEAD3Q99594 435 aa15.09■□□□□ 0.01
VPS52-214ENST00000463486 SLC29A1Q99808 456 aa15.09■□□□□ 0.01
VPS52-214ENST00000463486 REG4Q9BYZ8 158 aa15.09■□□□□ 0.01
VPS52-214ENST00000463486 GSX1Q9H4S2 264 aaPredicted RBP15.09■□□□□ 0.01
VPS52-214ENST00000463486 ZSCAN5BA6NJL1 495 aa15.08■□□□□ 0
VPS52-214ENST00000463486 F5H5K5 113 aa15.08■□□□□ 0
VPS52-214ENST00000463486 SELENOFO60613 162 aa15.08■□□□□ 0
VPS52-214ENST00000463486 KITLGP21583 273 aa15.08■□□□□ 0
VPS52-214ENST00000463486 GCH1P30793 250 aa15.08■□□□□ 0
VPS52-214ENST00000463486 MAGEB1P43366 347 aa15.08■□□□□ 0
VPS52-214ENST00000463486 SELENOVP59797 346 aa15.08■□□□□ 0
VPS52-214ENST00000463486 GABPB1Q06547 395 aaPredicted RBP15.08■□□□□ 0
VPS52-214ENST00000463486 KRTAP1-1Q07627 177 aa15.08■□□□□ 0
VPS52-214ENST00000463486 APOFQ13790 326 aa15.08■□□□□ 0
VPS52-214ENST00000463486 ZSCAN26Q16670 478 aa15.08■□□□□ 0
VPS52-214ENST00000463486 NKPD1Q17RQ9 610 aa15.08■□□□□ 0
VPS52-214ENST00000463486 KLHL12Q53G59 568 aa15.08■□□□□ 0
VPS52-214ENST00000463486 CBR4Q8N4T8 237 aa15.08■□□□□ 0
VPS52-214ENST00000463486 TCEANCQ8N8B7 351 aa15.08■□□□□ 0
VPS52-214ENST00000463486 TMEM163Q8TC26 289 aa15.08■□□□□ 0
VPS52-214ENST00000463486 RNF133Q8WVZ7 376 aa15.08■□□□□ 0
VPS52-214ENST00000463486 APOBEC3DQ96AK3 386 aaPredicted RBP15.08■□□□□ 0
VPS52-214ENST00000463486 CMBLQ96DG6 245 aa15.08■□□□□ 0
VPS52-214ENST00000463486 PLEKHA8Q96JA3 519 aa15.08■□□□□ 0
VPS52-214ENST00000463486 ABHD6Q9BV23 337 aa15.08■□□□□ 0
VPS52-214ENST00000463486 TEX12Q9BXU0 123 aa15.08■□□□□ 0
VPS52-214ENST00000463486 NKIRAS2Q9NYR9 191 aa15.08■□□□□ 0
VPS52-214ENST00000463486 ENOPH1Q9UHY7 261 aa15.08■□□□□ 0
VPS52-214ENST00000463486 KLHDC2Q9Y2U9 406 aa15.08■□□□□ 0
VPS52-214ENST00000463486 CR1P17927 2039 aa15.08■□□□□ 0
VPS52-214ENST00000463486 ANKRD65E5RJM6 399 aa15.07■□□□□ 0
VPS52-214ENST00000463486 LYNX1G3V0Z9 82 aa15.07■□□□□ 0
VPS52-214ENST00000463486 TLX2O43763 284 aaPredicted RBP15.07■□□□□ 0
VPS52-214ENST00000463486 ADH4P08319 380 aa15.07■□□□□ 0
VPS52-214ENST00000463486 LYNX1P0DP58 116 aa15.07■□□□□ 0
VPS52-214ENST00000463486 DAOP14920 347 aa15.07■□□□□ 0
VPS52-214ENST00000463486 GIFP27352 417 aa15.07■□□□□ 0
VPS52-214ENST00000463486 ALDH3A2P51648 485 aa15.07■□□□□ 0
VPS52-214ENST00000463486 HLXQ14774 488 aaPredicted RBP15.07■□□□□ 0
VPS52-214ENST00000463486 CLEC2AQ6UVW9 174 aa15.07■□□□□ 0
VPS52-214ENST00000463486 Q6ZR03 302 aa15.07■□□□□ 0
VPS52-214ENST00000463486 ZNF786Q8N393 782 aa15.07■□□□□ 0
VPS52-214ENST00000463486 OR6N2Q8NGY6 317 aa15.07■□□□□ 0
VPS52-214ENST00000463486 OTOSQ8NHW6 89 aa15.07■□□□□ 0
VPS52-214ENST00000463486 FAM168AQ92567 244 aa15.07■□□□□ 0
VPS52-214ENST00000463486 RHNO1Q9BSD3 238 aa15.07■□□□□ 0
VPS52-214ENST00000463486 LOC390937A0A1W2PQ73 354 aa15.06■□□□□ 0
VPS52-214ENST00000463486 M0R135 149 aa15.06■□□□□ 0
VPS52-214ENST00000463486 SMAD7O15105 426 aaKnown RBP15.06■□□□□ 0
VPS52-214ENST00000463486 IGHV1-46P01743 117 aa15.06■□□□□ 0
VPS52-214ENST00000463486 CSF3P09919 207 aa15.06■□□□□ 0
VPS52-214ENST00000463486 RAC2P15153 192 aa15.06■□□□□ 0
VPS52-214ENST00000463486 ALOX5APP20292 161 aa15.06■□□□□ 0
VPS52-214ENST00000463486 COL8A2P25067 703 aa15.06■□□□□ 0
VPS52-214ENST00000463486 OPRL1P41146 370 aa15.06■□□□□ 0
VPS52-214ENST00000463486 PDLIM4P50479 330 aa15.06■□□□□ 0
VPS52-214ENST00000463486 TPTEP56180 551 aa15.06■□□□□ 0
VPS52-214ENST00000463486 RIN1Q13671 783 aa15.06■□□□□ 0
VPS52-214ENST00000463486 EIF2B1Q14232 305 aaKnown RBP15.06■□□□□ 0
VPS52-214ENST00000463486 MOGQ16653 247 aa15.06■□□□□ 0
VPS52-214ENST00000463486 RHOUQ7L0Q8 258 aa15.06■□□□□ 0
VPS52-214ENST00000463486 SHFQ7M4L6 423 aa15.06■□□□□ 0
VPS52-214ENST00000463486 PRSS45Q7RTY3 260 aa15.06■□□□□ 0
VPS52-214ENST00000463486 MAPK1IP1LQ8NDC0 245 aa15.06■□□□□ 0
VPS52-214ENST00000463486 UBASH3BQ8TF42 649 aa15.06■□□□□ 0
VPS52-214ENST00000463486 ZNF799Q96GE5 643 aa15.06■□□□□ 0
VPS52-214ENST00000463486 COG8Q96MW5 612 aa15.06■□□□□ 0
VPS52-214ENST00000463486 IL4I1Q96RQ9 567 aa15.06■□□□□ 0
VPS52-214ENST00000463486 MBOAT4Q96T53 435 aa15.06■□□□□ 0
VPS52-214ENST00000463486 RIBC2Q9H4K1 309 aa15.06■□□□□ 0
VPS52-214ENST00000463486 MYOZ1Q9NP98 299 aaPredicted RBP15.06■□□□□ 0
VPS52-214ENST00000463486 PTTG3PQ9NZH4 202 aa15.06■□□□□ 0
VPS52-214ENST00000463486 GPR160Q9UJ42 338 aa15.06■□□□□ 0
VPS52-214ENST00000463486 PURGQ9UJV8 347 aaKnown RBP15.06■□□□□ 0
VPS52-214ENST00000463486 ABCA1O95477 2261 aa15.06■□□□□ 0
VPS52-214ENST00000463486 A0A1B0GWJ7 208 aa15.05■□□□□ -0
VPS52-214ENST00000463486 NDUFS8O00217 210 aa15.05■□□□□ -0
VPS52-214ENST00000463486 RP2O75695 350 aa15.05■□□□□ -0
VPS52-214ENST00000463486 NAA10P41227 235 aaPredicted RBP15.05■□□□□ -0
VPS52-214ENST00000463486 ZNF81P51508 661 aa15.05■□□□□ -0
VPS52-214ENST00000463486 HCCSP53701 268 aa15.05■□□□□ -0
VPS52-214ENST00000463486 MRPS11P82912 194 aaKnown RBP15.05■□□□□ -0
VPS52-214ENST00000463486 CDK5R2Q13319 367 aa15.05■□□□□ -0
VPS52-214ENST00000463486 GGTLC2Q14390 218 aa15.05■□□□□ -0
VPS52-214ENST00000463486 GK2Q14410 553 aaPredicted RBP15.05■□□□□ -0
VPS52-214ENST00000463486 SNAI3Q3KNW1 292 aa15.05■□□□□ -0
VPS52-214ENST00000463486 SPRNQ5BIV9 151 aa15.05■□□□□ -0
VPS52-214ENST00000463486 NXNL2Q5VZ03 156 aa15.05■□□□□ -0
VPS52-214ENST00000463486 DRAM2Q6UX65 266 aa15.05■□□□□ -0
VPS52-214ENST00000463486 SPATC1Q76KD6 591 aa15.05■□□□□ -0
VPS52-214ENST00000463486 MEPCEQ7L2J0 689 aaKnown RBP15.05■□□□□ -0
VPS52-214ENST00000463486 BIVMQ86UB2 503 aa15.05■□□□□ -0
VPS52-214ENST00000463486 ZNF454Q8N9F8 522 aa15.05■□□□□ -0
VPS52-214ENST00000463486 OR5L1Q8NGL2 311 aa15.05■□□□□ -0
VPS52-214ENST00000463486 YIPF5Q969M3 257 aa15.05■□□□□ -0
VPS52-214ENST00000463486 UBE2FQ969M7 185 aa15.05■□□□□ -0
VPS52-214ENST00000463486 SPTSSAQ969W0 71 aa15.05■□□□□ -0
VPS52-214ENST00000463486 HRASLS5Q96KN8 279 aa15.05■□□□□ -0
VPS52-214ENST00000463486 KCNJ15Q99712 375 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms