RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 ITLN1Q8WWA0 313 aa6.15□□□□□ -1.42
PTPRF-210ENST00000463041 ZNF582Q96NG8 517 aaPredicted RBP6.15□□□□□ -1.42
PTPRF-210ENST00000463041 PITX2Q99697 317 aa6.15□□□□□ -1.42
PTPRF-210ENST00000463041 HCAR1Q9BXC0 346 aa6.15□□□□□ -1.42
PTPRF-210ENST00000463041 TMPRSS13Q9BYE2 586 aa6.15□□□□□ -1.42
PTPRF-210ENST00000463041 MAGIXQ9H6Y5 334 aa6.15□□□□□ -1.42
PTPRF-210ENST00000463041 PATZ1Q9HBE1 687 aaKnown RBP6.15□□□□□ -1.42
PTPRF-210ENST00000463041 RPRD1BQ9NQG5 326 aaKnown RBP6.15□□□□□ -1.42
PTPRF-210ENST00000463041 TMEM100Q9NV29 134 aa6.15□□□□□ -1.42
PTPRF-210ENST00000463041 PTTG3PQ9NZH4 202 aa6.15□□□□□ -1.42
PTPRF-210ENST00000463041 CYB5R1Q9UHQ9 305 aa6.15□□□□□ -1.42
PTPRF-210ENST00000463041 BAIAP2Q9UQB8 552 aa6.15□□□□□ -1.42
PTPRF-210ENST00000463041 PPP1R3CQ9UQK1 317 aa6.15□□□□□ -1.42
PTPRF-210ENST00000463041 POLR3KQ9Y2Y1 108 aaPredicted RBP6.15□□□□□ -1.42
PTPRF-210ENST00000463041 LYVE1Q9Y5Y7 322 aa6.15□□□□□ -1.42
PTPRF-210ENST00000463041 NBEAL1Q6ZS30 2694 aa6.14□□□□□ -1.43
PTPRF-210ENST00000463041 A0A1B0GWJ7 208 aa6.14□□□□□ -1.43
PTPRF-210ENST00000463041 ISPDA4D126 451 aa6.14□□□□□ -1.43
PTPRF-210ENST00000463041 IQCF6A8MYZ5 107 aa6.14□□□□□ -1.43
PTPRF-210ENST00000463041 F5H5K5 113 aa6.14□□□□□ -1.43
PTPRF-210ENST00000463041 TMEM178BH3BS89 294 aa6.14□□□□□ -1.43
PTPRF-210ENST00000463041 BHLHE40O14503 412 aa6.14□□□□□ -1.43
PTPRF-210ENST00000463041 CCNB2O95067 398 aa6.14□□□□□ -1.43
PTPRF-210ENST00000463041 FSTL3O95633 263 aa6.14□□□□□ -1.43
PTPRF-210ENST00000463041 AVPP01185 164 aa6.14□□□□□ -1.43
PTPRF-210ENST00000463041 HLA-DQA2P01906 255 aa6.14□□□□□ -1.43
PTPRF-210ENST00000463041 ACSM4P0C7M7 580 aa6.14□□□□□ -1.43
PTPRF-210ENST00000463041 CALB2P22676 271 aa6.14□□□□□ -1.43
PTPRF-210ENST00000463041 FPR2P25090 351 aa6.14□□□□□ -1.43
PTPRF-210ENST00000463041 GGT2P36268 569 aa6.14□□□□□ -1.43
PTPRF-210ENST00000463041 MAGEA2P43356 314 aa6.14□□□□□ -1.43
PTPRF-210ENST00000463041 SLC6A9P48067 706 aa6.14□□□□□ -1.43
PTPRF-210ENST00000463041 SRP9P49458 86 aaKnown RBP6.14□□□□□ -1.43
PTPRF-210ENST00000463041 SRSF2Q01130 221 aaKnown RBP6.14□□□□□ -1.43
PTPRF-210ENST00000463041 MALLQ13021 153 aa6.14□□□□□ -1.43
PTPRF-210ENST00000463041 GK3PQ14409 553 aa6.14□□□□□ -1.43
PTPRF-210ENST00000463041 HLXQ14774 488 aaPredicted RBP6.14□□□□□ -1.43
PTPRF-210ENST00000463041 MICAQ29983 383 aa6.14□□□□□ -1.43
PTPRF-210ENST00000463041 ZNF181Q2M3W8 571 aa6.14□□□□□ -1.43
PTPRF-210ENST00000463041 FAM98BQ52LJ0 330 aaKnown RBP6.14□□□□□ -1.43
PTPRF-210ENST00000463041 SLC35F1Q5T1Q4 408 aa6.14□□□□□ -1.43
PTPRF-210ENST00000463041 ZNF770Q6IQ21 691 aaPredicted RBP6.14□□□□□ -1.43
PTPRF-210ENST00000463041 CYP2R1Q6VVX0 501 aa6.14□□□□□ -1.43
PTPRF-210ENST00000463041 C1orf229Q6ZS94 237 aaPredicted RBP6.14□□□□□ -1.43
PTPRF-210ENST00000463041 C1QL2Q7Z5L3 287 aa6.14□□□□□ -1.43
PTPRF-210ENST00000463041 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.14□□□□□ -1.43
PTPRF-210ENST00000463041 DHFR2Q86XF0 187 aa6.14□□□□□ -1.43
PTPRF-210ENST00000463041 LNX2Q8N448 690 aa6.14□□□□□ -1.43
PTPRF-210ENST00000463041 CELF2-AS1Q8N7Q2 184 aa6.14□□□□□ -1.43
PTPRF-210ENST00000463041 SDR9C7Q8NEX9 313 aa6.14□□□□□ -1.43
PTPRF-210ENST00000463041 OR2T4Q8NH00 348 aa6.14□□□□□ -1.43
PTPRF-210ENST00000463041 SPTSSAQ969W0 71 aa6.14□□□□□ -1.43
PTPRF-210ENST00000463041 ERGIC1Q969X5 290 aa6.14□□□□□ -1.43
PTPRF-210ENST00000463041 OR2V2Q96R30 315 aa6.14□□□□□ -1.43
PTPRF-210ENST00000463041 JMJD8Q96S16 334 aa6.14□□□□□ -1.43
PTPRF-210ENST00000463041 ATF6BQ99941 703 aa6.14□□□□□ -1.43
PTPRF-210ENST00000463041 SLC30A2Q9BRI3 323 aa6.14□□□□□ -1.43
PTPRF-210ENST00000463041 C7orf69Q9H7B7 122 aa6.14□□□□□ -1.43
PTPRF-210ENST00000463041 GCM1Q9NP62 436 aa6.14□□□□□ -1.43
PTPRF-210ENST00000463041 UBAP1Q9NZ09 502 aa6.14□□□□□ -1.43
PTPRF-210ENST00000463041 NOP16Q9Y3C1 178 aaKnown RBP6.14□□□□□ -1.43
PTPRF-210ENST00000463041 CDH10Q9Y6N8 788 aa6.14□□□□□ -1.43
PTPRF-210ENST00000463041 LOC105371242A0A075B767 164 aa6.13□□□□□ -1.43
PTPRF-210ENST00000463041 TCRBV5S2A0A599 114 aa6.13□□□□□ -1.43
PTPRF-210ENST00000463041 LRRC30A6NM36 301 aa6.13□□□□□ -1.43
PTPRF-210ENST00000463041 VENTXO95231 258 aa6.13□□□□□ -1.43
PTPRF-210ENST00000463041 FAM107AO95990 144 aa6.13□□□□□ -1.43
PTPRF-210ENST00000463041 LCATP04180 440 aa6.13□□□□□ -1.43
PTPRF-210ENST00000463041 WNT2P09544 360 aa6.13□□□□□ -1.43
PTPRF-210ENST00000463041 T-ENOLP0DO92 83 aa6.13□□□□□ -1.43
PTPRF-210ENST00000463041 HOXB6P17509 224 aaKnown RBP6.13□□□□□ -1.43
PTPRF-210ENST00000463041 EPHA1P21709 976 aa6.13□□□□□ -1.43
PTPRF-210ENST00000463041 ZFP36P26651 326 aaKnown RBP6.13□□□□□ -1.43
PTPRF-210ENST00000463041 FMO3P31513 532 aa6.13□□□□□ -1.43
PTPRF-210ENST00000463041 MDH2P40926 338 aaKnown RBP6.13□□□□□ -1.43
PTPRF-210ENST00000463041 BLVRAP53004 296 aa6.13□□□□□ -1.43
PTPRF-210ENST00000463041 SLC25A1P53007 311 aa6.13□□□□□ -1.43
PTPRF-210ENST00000463041 BTG1P62324 171 aa6.13□□□□□ -1.43
PTPRF-210ENST00000463041 LCN2P80188 198 aa6.13□□□□□ -1.43
PTPRF-210ENST00000463041 MS4A2Q01362 244 aa6.13□□□□□ -1.43
PTPRF-210ENST00000463041 TRAP1Q12931 704 aaKnown RBP6.13□□□□□ -1.43
PTPRF-210ENST00000463041 GK2Q14410 553 aaPredicted RBP6.13□□□□□ -1.43
PTPRF-210ENST00000463041 PCK2Q16822 640 aa6.13□□□□□ -1.43
PTPRF-210ENST00000463041 TEX30Q5JUR7 227 aa6.13□□□□□ -1.43
PTPRF-210ENST00000463041 CLEC12AQ5QGZ9 265 aa6.13□□□□□ -1.43
PTPRF-210ENST00000463041 OR2T5Q6IEZ7 315 aa6.13□□□□□ -1.43
PTPRF-210ENST00000463041 LCN8Q6JVE9 175 aa6.13□□□□□ -1.43
PTPRF-210ENST00000463041 CD300LDQ6UXZ3 194 aa6.13□□□□□ -1.43
PTPRF-210ENST00000463041 CFAP77Q6ZQR2 320 aa6.13□□□□□ -1.43
PTPRF-210ENST00000463041 PGAP1Q75T13 922 aa6.13□□□□□ -1.43
PTPRF-210ENST00000463041 NAA40Q86UY6 237 aa6.13□□□□□ -1.43
PTPRF-210ENST00000463041 LINC00346Q8IVM7 164 aa6.13□□□□□ -1.43
PTPRF-210ENST00000463041 C1orf87Q8N0U7 546 aa6.13□□□□□ -1.43
PTPRF-210ENST00000463041 OR5AS1Q8N127 324 aa6.13□□□□□ -1.43
PTPRF-210ENST00000463041 MUC20Q8N307 709 aaPredicted RBP6.13□□□□□ -1.43
PTPRF-210ENST00000463041 CCDC197Q8NCU1 140 aa6.13□□□□□ -1.43
PTPRF-210ENST00000463041 OR9Q2Q8NGE9 314 aa6.13□□□□□ -1.43
PTPRF-210ENST00000463041 OR4C15Q8NGM1 316 aa6.13□□□□□ -1.43
PTPRF-210ENST00000463041 OR2T29Q8NH02 315 aa6.13□□□□□ -1.43
PTPRF-210ENST00000463041 SLCO4A1Q96BD0 722 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms