RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 G6PC2Q9NQR9 355 aa12.81□□□□□ -0.36
HDAC6-213ENST00000462730 DHDHQ9UQ10 334 aa12.81□□□□□ -0.36
HDAC6-213ENST00000462730 LAMA5O15230 3695 aa12.81□□□□□ -0.36
HDAC6-213ENST00000462730 TMEM269A0A1B0GVZ9 245 aa12.81□□□□□ -0.36
HDAC6-213ENST00000462730 FAM166BA8MTA8 275 aa12.81□□□□□ -0.36
HDAC6-213ENST00000462730 B8ZZF3 427 aa12.81□□□□□ -0.36
HDAC6-213ENST00000462730 CDK2AP1O14519 115 aa12.81□□□□□ -0.36
HDAC6-213ENST00000462730 SHOXO15266 292 aa12.81□□□□□ -0.36
HDAC6-213ENST00000462730 DOK2O60496 412 aa12.81□□□□□ -0.36
HDAC6-213ENST00000462730 MAS1P04201 325 aa12.81□□□□□ -0.36
HDAC6-213ENST00000462730 CD46P15529 392 aa12.81□□□□□ -0.36
HDAC6-213ENST00000462730 SELENOPP49908 381 aa12.81□□□□□ -0.36
HDAC6-213ENST00000462730 MEOX1P50221 254 aa12.81□□□□□ -0.36
HDAC6-213ENST00000462730 CCL11P51671 97 aa12.81□□□□□ -0.36
HDAC6-213ENST00000462730 GFRA1P56159 465 aa12.81□□□□□ -0.36
HDAC6-213ENST00000462730 FOXC1Q12948 553 aa12.81□□□□□ -0.36
HDAC6-213ENST00000462730 MAB21L1Q13394 359 aa12.81□□□□□ -0.36
HDAC6-213ENST00000462730 KCNMB1Q16558 191 aa12.81□□□□□ -0.36
HDAC6-213ENST00000462730 BCL2L15Q5TBC7 163 aa12.81□□□□□ -0.36
HDAC6-213ENST00000462730 KLHL24Q6TFL4 600 aa12.81□□□□□ -0.36
HDAC6-213ENST00000462730 ASB18Q6ZVZ8 466 aa12.81□□□□□ -0.36
HDAC6-213ENST00000462730 AKAP1Q92667 903 aaKnown RBP eCLIP12.81□□□□□ -0.36
HDAC6-213ENST00000462730 SNAPC3Q92966 411 aa12.81□□□□□ -0.36
HDAC6-213ENST00000462730 PNPLA2Q96AD5 504 aa12.81□□□□□ -0.36
HDAC6-213ENST00000462730 SF3B5Q9BWJ5 86 aaKnown RBP12.81□□□□□ -0.36
HDAC6-213ENST00000462730 B3GNT2Q9NY97 397 aa12.81□□□□□ -0.36
HDAC6-213ENST00000462730 SPATA2Q9UM82 520 aa12.81□□□□□ -0.36
HDAC6-213ENST00000462730 AKAP13Q12802 2813 aa12.81□□□□□ -0.36
HDAC6-213ENST00000462730 ANXA2P2A6NMY6 339 aa12.8□□□□□ -0.36
HDAC6-213ENST00000462730 INMT-MINDY4F8WBC2 141 aa12.8□□□□□ -0.36
HDAC6-213ENST00000462730 SMLR1H3BR10 107 aa12.8□□□□□ -0.36
HDAC6-213ENST00000462730 AKR7A2O43488 359 aa12.8□□□□□ -0.36
HDAC6-213ENST00000462730 ANXA2P07355 339 aaKnown RBP12.8□□□□□ -0.36
HDAC6-213ENST00000462730 CELA3AP09093 270 aa12.8□□□□□ -0.36
HDAC6-213ENST00000462730 MAGEA5P43359 124 aa12.8□□□□□ -0.36
HDAC6-213ENST00000462730 PLGLB1Q02325 96 aa12.8□□□□□ -0.36
HDAC6-213ENST00000462730 SGCAQ16586 387 aa12.8□□□□□ -0.36
HDAC6-213ENST00000462730 C10orf128Q5T292 105 aa12.8□□□□□ -0.36
HDAC6-213ENST00000462730 LAMTOR1Q6IAA8 161 aa12.8□□□□□ -0.36
HDAC6-213ENST00000462730 ZNF782Q6ZMW2 699 aaPredicted RBP12.8□□□□□ -0.36
HDAC6-213ENST00000462730 IDO2Q6ZQW0 420 aa12.8□□□□□ -0.36
HDAC6-213ENST00000462730 DNAAF1Q8NEP3 725 aa12.8□□□□□ -0.36
HDAC6-213ENST00000462730 GIMAP1Q8WWP7 306 aa12.8□□□□□ -0.36
HDAC6-213ENST00000462730 ROBO4Q8WZ75 1007 aa12.8□□□□□ -0.36
HDAC6-213ENST00000462730 HAS2Q92819 552 aa12.8□□□□□ -0.36
HDAC6-213ENST00000462730 ZNF775Q96BV0 537 aaPredicted RBP12.8□□□□□ -0.36
HDAC6-213ENST00000462730 ASH2LQ9UBL3 628 aa12.8□□□□□ -0.36
HDAC6-213ENST00000462730 LOC107986453A0A1B0GWG9 222 aa12.8□□□□□ -0.36
HDAC6-213ENST00000462730 KLRC4-KLRK1H3BQV0 150 aa12.8□□□□□ -0.36
HDAC6-213ENST00000462730 HPNP05981 417 aa12.8□□□□□ -0.36
HDAC6-213ENST00000462730 SPINK2P20155 84 aa12.8□□□□□ -0.36
HDAC6-213ENST00000462730 ACHEP22303 614 aa12.8□□□□□ -0.36
HDAC6-213ENST00000462730 PITPNBP48739 271 aa12.8□□□□□ -0.36
HDAC6-213ENST00000462730 CLDN15P56746 228 aa12.8□□□□□ -0.36
HDAC6-213ENST00000462730 CLDN12P56749 244 aa12.8□□□□□ -0.36
HDAC6-213ENST00000462730 SNRPD2P62316 118 aaKnown RBP12.8□□□□□ -0.36
HDAC6-213ENST00000462730 DEFB109BQ30KR1 87 aa12.8□□□□□ -0.36
HDAC6-213ENST00000462730 UBE2NLQ5JXB2 153 aa12.8□□□□□ -0.36
HDAC6-213ENST00000462730 ABLIM2Q6H8Q1 611 aa12.8□□□□□ -0.36
HDAC6-213ENST00000462730 HDHD2Q9H0R4 259 aa12.8□□□□□ -0.36
HDAC6-213ENST00000462730 FAM206AQ9NX38 181 aa12.8□□□□□ -0.36
HDAC6-213ENST00000462730 PCDHGA9Q9Y5G4 932 aaKnown RBP12.8□□□□□ -0.36
HDAC6-213ENST00000462730 CSAG2Q9Y5P2 127 aa12.8□□□□□ -0.36
HDAC6-213ENST00000462730 ZNF878C9JN71 531 aa12.79□□□□□ -0.36
HDAC6-213ENST00000462730 LINC01387J3KSC0 135 aa12.79□□□□□ -0.36
HDAC6-213ENST00000462730 NAT2P11245 290 aa12.79□□□□□ -0.36
HDAC6-213ENST00000462730 SLC6A1P30531 599 aa12.79□□□□□ -0.36
HDAC6-213ENST00000462730 OR3A3P47888 321 aa12.79□□□□□ -0.36
HDAC6-213ENST00000462730 ZNF133P52736 654 aaPredicted RBP12.79□□□□□ -0.36
HDAC6-213ENST00000462730 TAF13Q15543 124 aa12.79□□□□□ -0.36
HDAC6-213ENST00000462730 ESCO2Q56NI9 601 aa12.79□□□□□ -0.36
HDAC6-213ENST00000462730 ZNF766Q5HY98 468 aa12.79□□□□□ -0.36
HDAC6-213ENST00000462730 PDSS1Q5T2R2 415 aa12.79□□□□□ -0.36
HDAC6-213ENST00000462730 ZNF704Q6ZNC4 412 aaPredicted RBP12.79□□□□□ -0.36
HDAC6-213ENST00000462730 C20orf196Q8IYI0 205 aa12.79□□□□□ -0.36
HDAC6-213ENST00000462730 TMEM251Q8N6I4 163 aa12.79□□□□□ -0.36
HDAC6-213ENST00000462730 OR13C3Q8NGS6 347 aa12.79□□□□□ -0.36
HDAC6-213ENST00000462730 INTS12Q96CB8 462 aaKnown RBP12.79□□□□□ -0.36
HDAC6-213ENST00000462730 SCMH1Q96GD3 660 aa12.79□□□□□ -0.36
HDAC6-213ENST00000462730 ULBP2Q9BZM5 246 aa12.79□□□□□ -0.36
HDAC6-213ENST00000462730 FOXD3Q9UJU5 478 aaPredicted RBP12.79□□□□□ -0.36
HDAC6-213ENST00000462730 NUP50Q9UKX7 468 aa12.79□□□□□ -0.36
HDAC6-213ENST00000462730 HHLA2Q9UM44 414 aa12.79□□□□□ -0.36
HDAC6-213ENST00000462730 TMA7Q9Y2S6 64 aaKnown RBP12.79□□□□□ -0.36
HDAC6-213ENST00000462730 HSPB11Q9Y547 144 aa12.79□□□□□ -0.36
HDAC6-213ENST00000462730 FLVCR1Q9Y5Y0 555 aa12.79□□□□□ -0.36
HDAC6-213ENST00000462730 SPENQ96T58 3664 aaKnown RBP12.78□□□□□ -0.36
HDAC6-213ENST00000462730 ARPC4-TTLL3A0A0A6YYG9 625 aa12.78□□□□□ -0.36
HDAC6-213ENST00000462730 ZNF716A6NP11 495 aa12.78□□□□□ -0.36
HDAC6-213ENST00000462730 P2RY10O00398 339 aa12.78□□□□□ -0.36
HDAC6-213ENST00000462730 DHHO43323 396 aa12.78□□□□□ -0.36
HDAC6-213ENST00000462730 ICMTO60725 284 aa12.78□□□□□ -0.36
HDAC6-213ENST00000462730 TMEM127O75204 238 aa12.78□□□□□ -0.36
HDAC6-213ENST00000462730 GLSO94925 669 aaPredicted RBP12.78□□□□□ -0.36
HDAC6-213ENST00000462730 CD2P06729 351 aa12.78□□□□□ -0.36
HDAC6-213ENST00000462730 MSR1P21757 451 aa12.78□□□□□ -0.36
HDAC6-213ENST00000462730 HSD11B1P28845 292 aa12.78□□□□□ -0.36
HDAC6-213ENST00000462730 GUCA1AP43080 201 aaPredicted RBP12.78□□□□□ -0.36
HDAC6-213ENST00000462730 MMP16P51512 607 aa12.78□□□□□ -0.36
HDAC6-213ENST00000462730 GPR176Q14439 515 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms