RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 SGCEO43556 437 aa6.71□□□□□ -1.34
CDC42BPA-210ENST00000462553 PLPP2O43688 288 aa6.71□□□□□ -1.34
CDC42BPA-210ENST00000462553 CDC14BO60729 498 aa6.71□□□□□ -1.34
CDC42BPA-210ENST00000462553 TIPRLO75663 272 aa6.71□□□□□ -1.34
CDC42BPA-210ENST00000462553 RENP00797 406 aa6.71□□□□□ -1.34
CDC42BPA-210ENST00000462553 CLUP10909 449 aa6.71□□□□□ -1.34
CDC42BPA-210ENST00000462553 HOXB6P17509 224 aaKnown RBP6.71□□□□□ -1.34
CDC42BPA-210ENST00000462553 NOS3P29474 1203 aa6.71□□□□□ -1.34
CDC42BPA-210ENST00000462553 CRABP1P29762 137 aa6.71□□□□□ -1.34
CDC42BPA-210ENST00000462553 PYCR1P32322 319 aa6.71□□□□□ -1.34
CDC42BPA-210ENST00000462553 GGT2P36268 569 aa6.71□□□□□ -1.34
CDC42BPA-210ENST00000462553 MPV17P39210 176 aa6.71□□□□□ -1.34
CDC42BPA-210ENST00000462553 HTR5AP47898 357 aa6.71□□□□□ -1.34
CDC42BPA-210ENST00000462553 GDI2P50395 445 aaKnown RBP6.71□□□□□ -1.34
CDC42BPA-210ENST00000462553 PCBD1P61457 104 aa6.71□□□□□ -1.34
CDC42BPA-210ENST00000462553 CCL8P80075 99 aa6.71□□□□□ -1.34
CDC42BPA-210ENST00000462553 PLP2Q04941 152 aa6.71□□□□□ -1.34
CDC42BPA-210ENST00000462553 SCRN3Q0VDG4 424 aa6.71□□□□□ -1.34
CDC42BPA-210ENST00000462553 HNRNPA0Q13151 305 aaKnown RBP6.71□□□□□ -1.34
CDC42BPA-210ENST00000462553 SCGB2A2Q13296 93 aa6.71□□□□□ -1.34
CDC42BPA-210ENST00000462553 CRMP1Q14194 572 aa6.71□□□□□ -1.34
CDC42BPA-210ENST00000462553 NKPD1Q17RQ9 610 aa6.71□□□□□ -1.34
CDC42BPA-210ENST00000462553 KRTAP27-1Q3LI81 207 aa6.71□□□□□ -1.34
CDC42BPA-210ENST00000462553 SLC36A3Q495N2 470 aa6.71□□□□□ -1.34
CDC42BPA-210ENST00000462553 PRR31Q5SQ13 230 aa6.71□□□□□ -1.34
CDC42BPA-210ENST00000462553 RGS7BPQ6MZT1 257 aaPredicted RBP6.71□□□□□ -1.34
CDC42BPA-210ENST00000462553 SLC18B1Q6NT16 456 aa6.71□□□□□ -1.34
CDC42BPA-210ENST00000462553 DNM1P34Q6PK57 102 aa6.71□□□□□ -1.34
CDC42BPA-210ENST00000462553 CORO6Q6QEF8 472 aa6.71□□□□□ -1.34
CDC42BPA-210ENST00000462553 CFAP77Q6ZQR2 320 aa6.71□□□□□ -1.34
CDC42BPA-210ENST00000462553 IQCF1Q8N6M8 205 aa6.71□□□□□ -1.34
CDC42BPA-210ENST00000462553 OR1J2Q8NGS2 313 aa6.71□□□□□ -1.34
CDC42BPA-210ENST00000462553 SLC7A6Q92536 515 aa6.71□□□□□ -1.34
CDC42BPA-210ENST00000462553 GCDHQ92947 438 aaPredicted RBP6.71□□□□□ -1.34
CDC42BPA-210ENST00000462553 DUS3LQ96G46 650 aaKnown RBP6.71□□□□□ -1.34
CDC42BPA-210ENST00000462553 BCL2L14Q9BZR8 327 aa6.71□□□□□ -1.34
CDC42BPA-210ENST00000462553 SRA1Q9HD15 236 aaKnown RBP6.71□□□□□ -1.34
CDC42BPA-210ENST00000462553 PNRC2Q9NPJ4 139 aaKnown RBP6.71□□□□□ -1.34
CDC42BPA-210ENST00000462553 PDP1Q9P0J1 537 aaPredicted RBP6.71□□□□□ -1.34
CDC42BPA-210ENST00000462553 TAAR3PQ9P1P4 343 aa6.71□□□□□ -1.34
CDC42BPA-210ENST00000462553 DNAJB9Q9UBS3 223 aa6.71□□□□□ -1.34
CDC42BPA-210ENST00000462553 DUSP13Q9UII6 198 aa6.71□□□□□ -1.34
CDC42BPA-210ENST00000462553 A0A0G2JMP0 313 aa6.7□□□□□ -1.34
CDC42BPA-210ENST00000462553 A0A0X1KG70 313 aa6.7□□□□□ -1.34
CDC42BPA-210ENST00000462553 TMPRSS2O15393 492 aa6.7□□□□□ -1.34
CDC42BPA-210ENST00000462553 NGFP01138 241 aa6.7□□□□□ -1.34
CDC42BPA-210ENST00000462553 DBHP09172 617 aa6.7□□□□□ -1.34
CDC42BPA-210ENST00000462553 VSIG8P0DPA2 414 aa6.7□□□□□ -1.34
CDC42BPA-210ENST00000462553 SPI1P17947 270 aa6.7□□□□□ -1.34
CDC42BPA-210ENST00000462553 GSTM3P21266 225 aa6.7□□□□□ -1.34
CDC42BPA-210ENST00000462553 PRKACGP22612 351 aa6.7□□□□□ -1.34
CDC42BPA-210ENST00000462553 CCNOP22674 350 aa6.7□□□□□ -1.34
CDC42BPA-210ENST00000462553 ANOS1P23352 680 aa6.7□□□□□ -1.34
CDC42BPA-210ENST00000462553 GRK5P34947 590 aa6.7□□□□□ -1.34
CDC42BPA-210ENST00000462553 RPS27P42677 84 aaKnown RBP6.7□□□□□ -1.34
CDC42BPA-210ENST00000462553 CRYBB2P43320 205 aa6.7□□□□□ -1.34
CDC42BPA-210ENST00000462553 RASSF2P50749 326 aa6.7□□□□□ -1.34
CDC42BPA-210ENST00000462553 SLC25A1P53007 311 aa6.7□□□□□ -1.34
CDC42BPA-210ENST00000462553 KLF3P57682 345 aaPredicted RBP6.7□□□□□ -1.34
CDC42BPA-210ENST00000462553 UBA52P62987 128 aaKnown RBP6.7□□□□□ -1.34
CDC42BPA-210ENST00000462553 TEKQ02763 1124 aa6.7□□□□□ -1.34
CDC42BPA-210ENST00000462553 MVKQ03426 396 aa6.7□□□□□ -1.34
CDC42BPA-210ENST00000462553 GLO1Q04760 184 aa6.7□□□□□ -1.34
CDC42BPA-210ENST00000462553 COX10Q12887 443 aa6.7□□□□□ -1.34
CDC42BPA-210ENST00000462553 ATP6AP1Q15904 470 aa6.7□□□□□ -1.34
CDC42BPA-210ENST00000462553 RSPO1Q2MKA7 263 aaPredicted RBP6.7□□□□□ -1.34
CDC42BPA-210ENST00000462553 PCGF3Q3KNV8 242 aa6.7□□□□□ -1.34
CDC42BPA-210ENST00000462553 SPATA46Q5T0L3 261 aa6.7□□□□□ -1.34
CDC42BPA-210ENST00000462553 LINC01590Q5TEZ4 76 aa6.7□□□□□ -1.34
CDC42BPA-210ENST00000462553 ACSM5Q6NUN0 579 aa6.7□□□□□ -1.34
CDC42BPA-210ENST00000462553 FAHD1Q6P587 224 aa6.7□□□□□ -1.34
CDC42BPA-210ENST00000462553 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.7□□□□□ -1.34
CDC42BPA-210ENST00000462553 LINC00346Q8IVM7 164 aa6.7□□□□□ -1.34
CDC42BPA-210ENST00000462553 OR2T33Q8NG76 320 aa6.7□□□□□ -1.34
CDC42BPA-210ENST00000462553 OR4M2Q8NGB6 313 aa6.7□□□□□ -1.34
CDC42BPA-210ENST00000462553 OR51L1Q8NGJ5 315 aa6.7□□□□□ -1.34
CDC42BPA-210ENST00000462553 OR10S1Q8NGN2 331 aa6.7□□□□□ -1.34
CDC42BPA-210ENST00000462553 OR9Q1Q8NGQ5 310 aa6.7□□□□□ -1.34
CDC42BPA-210ENST00000462553 OR1J1Q8NGS3 322 aa6.7□□□□□ -1.34
CDC42BPA-210ENST00000462553 SLC25A40Q8TBP6 338 aa6.7□□□□□ -1.34
CDC42BPA-210ENST00000462553 IPCEF1Q8WWN9 437 aaPredicted RBP6.7□□□□□ -1.34
CDC42BPA-210ENST00000462553 DVL3Q92997 716 aaPredicted RBP6.7□□□□□ -1.34
CDC42BPA-210ENST00000462553 MARS2Q96GW9 593 aaKnown RBP6.7□□□□□ -1.34
CDC42BPA-210ENST00000462553 C1orf147Q96MC9 270 aaPredicted RBP6.7□□□□□ -1.34
CDC42BPA-210ENST00000462553 COQ7Q99807 217 aa6.7□□□□□ -1.34
CDC42BPA-210ENST00000462553 SUCNR1Q9BXA5 334 aa6.7□□□□□ -1.34
CDC42BPA-210ENST00000462553 HCAR1Q9BXC0 346 aa6.7□□□□□ -1.34
CDC42BPA-210ENST00000462553 MMADHCQ9H3L0 296 aaPredicted RBP6.7□□□□□ -1.34
CDC42BPA-210ENST00000462553 YY1AP1Q9H869 796 aa6.7□□□□□ -1.34
CDC42BPA-210ENST00000462553 HINT3Q9NQE9 182 aaKnown RBP6.7□□□□□ -1.34
CDC42BPA-210ENST00000462553 CMC2Q9NRP2 79 aa6.7□□□□□ -1.34
CDC42BPA-210ENST00000462553 NKIRAS2Q9NYR9 191 aa6.7□□□□□ -1.34
CDC42BPA-210ENST00000462553 PLEK2Q9NYT0 353 aa6.7□□□□□ -1.34
CDC42BPA-210ENST00000462553 CYB5R1Q9UHQ9 305 aa6.7□□□□□ -1.34
CDC42BPA-210ENST00000462553 ATPIF1Q9UII2 106 aa6.7□□□□□ -1.34
CDC42BPA-210ENST00000462553 KLHL21Q9UJP4 597 aa6.7□□□□□ -1.34
CDC42BPA-210ENST00000462553 BAIAP2Q9UQB8 552 aa6.7□□□□□ -1.34
CDC42BPA-210ENST00000462553 WIPI2Q9Y4P8 454 aa6.7□□□□□ -1.34
CDC42BPA-210ENST00000462553 COMMD3-BMI1R4GMX3 469 aa6.7□□□□□ -1.34
CDC42BPA-210ENST00000462553 IGHV1-69-2A0A0G2JMI3 117 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms