RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 FBLIM1Q8WUP2 373 aa10.15□□□□□ -0.78
CPNE1-221ENST00000462352 IPCEF1Q8WWN9 437 aaPredicted RBP10.15□□□□□ -0.78
CPNE1-221ENST00000462352 ASB17Q8WXJ9 295 aa10.15□□□□□ -0.78
CPNE1-221ENST00000462352 LGALS12Q96DT0 336 aa10.15□□□□□ -0.78
CPNE1-221ENST00000462352 TBX5Q99593 518 aa10.15□□□□□ -0.78
CPNE1-221ENST00000462352 KCNJ15Q99712 375 aa10.15□□□□□ -0.78
CPNE1-221ENST00000462352 TTTY10Q9BZA0 68 aa10.15□□□□□ -0.78
CPNE1-221ENST00000462352 FAIMQ9NVQ4 179 aa10.15□□□□□ -0.78
CPNE1-221ENST00000462352 SLCO1C1Q9NYB5 712 aa10.15□□□□□ -0.78
CPNE1-221ENST00000462352 LAMP3Q9UQV4 416 aa10.15□□□□□ -0.78
CPNE1-221ENST00000462352 EXOGQ9Y2C4 368 aaKnown RBP10.15□□□□□ -0.78
CPNE1-221ENST00000462352 CMAHPQ9Y471 501 aa10.15□□□□□ -0.78
CPNE1-221ENST00000462352 A0A1W2PQL4 384 aaPredicted RBP10.14□□□□□ -0.79
CPNE1-221ENST00000462352 VSTM5A8MXK1 200 aa10.14□□□□□ -0.79
CPNE1-221ENST00000462352 J3QRE1 110 aa10.14□□□□□ -0.79
CPNE1-221ENST00000462352 J3QW42 95 aa10.14□□□□□ -0.79
CPNE1-221ENST00000462352 PSMD9O00233 223 aa10.14□□□□□ -0.79
CPNE1-221ENST00000462352 CD8AP01732 235 aa10.14□□□□□ -0.79
CPNE1-221ENST00000462352 RAF1P04049 648 aa10.14□□□□□ -0.79
CPNE1-221ENST00000462352 LCATP04180 440 aa10.14□□□□□ -0.79
CPNE1-221ENST00000462352 CD53P19397 219 aa10.14□□□□□ -0.79
CPNE1-221ENST00000462352 SERPINF1P36955 418 aa10.14□□□□□ -0.79
CPNE1-221ENST00000462352 PPP1CBP62140 327 aa10.14□□□□□ -0.79
CPNE1-221ENST00000462352 ROM1Q03395 351 aa10.14□□□□□ -0.79
CPNE1-221ENST00000462352 RAB40BQ12829 278 aa10.14□□□□□ -0.79
CPNE1-221ENST00000462352 SNCBQ16143 134 aa10.14□□□□□ -0.79
CPNE1-221ENST00000462352 SPATA46Q5T0L3 261 aa10.14□□□□□ -0.79
CPNE1-221ENST00000462352 AGAP6Q5VW22 663 aa10.14□□□□□ -0.79
CPNE1-221ENST00000462352 LAIR2Q6ISS4 152 aa10.14□□□□□ -0.79
CPNE1-221ENST00000462352 DEGS2Q6QHC5 323 aa10.14□□□□□ -0.79
CPNE1-221ENST00000462352 ZNF322Q6U7Q0 402 aaPredicted RBP10.14□□□□□ -0.79
CPNE1-221ENST00000462352 DRAM2Q6UX65 266 aa10.14□□□□□ -0.79
CPNE1-221ENST00000462352 COLCA1Q6ZS62 124 aa10.14□□□□□ -0.79
CPNE1-221ENST00000462352 SSX6Q7RTT6 188 aa10.14□□□□□ -0.79
CPNE1-221ENST00000462352 DTX2Q86UW9 622 aa10.14□□□□□ -0.79
CPNE1-221ENST00000462352 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.14□□□□□ -0.79
CPNE1-221ENST00000462352 C1orf174Q8IYL3 243 aa10.14□□□□□ -0.79
CPNE1-221ENST00000462352 ZNF679Q8IYX0 411 aa10.14□□□□□ -0.79
CPNE1-221ENST00000462352 ZNF283Q8N7M2 679 aa10.14□□□□□ -0.79
CPNE1-221ENST00000462352 SLC25A40Q8TBP6 338 aa10.14□□□□□ -0.79
CPNE1-221ENST00000462352 IGFBPL1Q8WX77 278 aa10.14□□□□□ -0.79
CPNE1-221ENST00000462352 MRPL24Q96A35 216 aaKnown RBP10.14□□□□□ -0.79
CPNE1-221ENST00000462352 APOBEC3DQ96AK3 386 aaPredicted RBP10.14□□□□□ -0.79
CPNE1-221ENST00000462352 OR8B4Q96RC9 309 aa10.14□□□□□ -0.79
CPNE1-221ENST00000462352 CCL19Q99731 98 aa10.14□□□□□ -0.79
CPNE1-221ENST00000462352 TRAF4Q9BUZ4 470 aaPredicted RBP10.14□□□□□ -0.79
CPNE1-221ENST00000462352 C1QTNF5Q9BXJ0 243 aa10.14□□□□□ -0.79
CPNE1-221ENST00000462352 MROQ9BYG7 248 aa10.14□□□□□ -0.79
CPNE1-221ENST00000462352 ANKRD60Q9BZ19 345 aa10.14□□□□□ -0.79
CPNE1-221ENST00000462352 MRPL37Q9BZE1 423 aaKnown RBP10.14□□□□□ -0.79
CPNE1-221ENST00000462352 OR2J1Q9GZK6 312 aa10.14□□□□□ -0.79
CPNE1-221ENST00000462352 POFUT1Q9H488 388 aa10.14□□□□□ -0.79
CPNE1-221ENST00000462352 MRPS18AQ9NVS2 196 aaKnown RBP10.14□□□□□ -0.79
CPNE1-221ENST00000462352 ST6GALNAC2Q9UJ37 374 aa10.14□□□□□ -0.79
CPNE1-221ENST00000462352 FZR1Q9UM11 496 aa10.14□□□□□ -0.79
CPNE1-221ENST00000462352 PLEKHA6Q9Y2H5 1048 aa10.14□□□□□ -0.79
CPNE1-221ENST00000462352 STARD10Q9Y365 291 aa10.14□□□□□ -0.79
CPNE1-221ENST00000462352 LRP12Q9Y561 859 aa10.14□□□□□ -0.79
CPNE1-221ENST00000462352 PCDHGB1Q9Y5G3 927 aa10.14□□□□□ -0.79
CPNE1-221ENST00000462352 NOTCH2Q04721 2471 aa10.14□□□□□ -0.79
CPNE1-221ENST00000462352 CSMD1Q96PZ7 3565 aa10.13□□□□□ -0.79
CPNE1-221ENST00000462352 B9A039 149 aa10.13□□□□□ -0.79
CPNE1-221ENST00000462352 MAGEB4O15481 346 aaPredicted RBP10.13□□□□□ -0.79
CPNE1-221ENST00000462352 ATE1O95260 518 aa10.13□□□□□ -0.79
CPNE1-221ENST00000462352 FADS2O95864 444 aaKnown RBP10.13□□□□□ -0.79
CPNE1-221ENST00000462352 APOC1P02654 83 aa10.13□□□□□ -0.79
CPNE1-221ENST00000462352 SLC2A1P11166 492 aa10.13□□□□□ -0.79
CPNE1-221ENST00000462352 ZNF250P15622 560 aa10.13□□□□□ -0.79
CPNE1-221ENST00000462352 ANOS1P23352 680 aa10.13□□□□□ -0.79
CPNE1-221ENST00000462352 MYF6P23409 242 aa10.13□□□□□ -0.79
CPNE1-221ENST00000462352 SLC6A9P48067 706 aa10.13□□□□□ -0.79
CPNE1-221ENST00000462352 CX3CR1P49238 355 aa10.13□□□□□ -0.79
CPNE1-221ENST00000462352 ACTC1P68032 377 aa10.13□□□□□ -0.79
CPNE1-221ENST00000462352 ACTA1P68133 377 aa10.13□□□□□ -0.79
CPNE1-221ENST00000462352 ZNF85Q03923 595 aa10.13□□□□□ -0.79
CPNE1-221ENST00000462352 EGR3Q06889 387 aa10.13□□□□□ -0.79
CPNE1-221ENST00000462352 EFNB3Q15768 340 aa10.13□□□□□ -0.79
CPNE1-221ENST00000462352 MST1LQ2TV78 715 aa10.13□□□□□ -0.79
CPNE1-221ENST00000462352 ZNF718Q3SXZ3 478 aa10.13□□□□□ -0.79
CPNE1-221ENST00000462352 KLHL22Q53GT1 634 aa10.13□□□□□ -0.79
CPNE1-221ENST00000462352 C11orf71Q6IPW1 123 aa10.13□□□□□ -0.79
CPNE1-221ENST00000462352 LRP11Q86VZ4 500 aa10.13□□□□□ -0.79
CPNE1-221ENST00000462352 SYNPRQ8TBG9 265 aa10.13□□□□□ -0.79
CPNE1-221ENST00000462352 MARS2Q96GW9 593 aaKnown RBP10.13□□□□□ -0.79
CPNE1-221ENST00000462352 COG8Q96MW5 612 aa10.13□□□□□ -0.79
CPNE1-221ENST00000462352 ZNF184Q99676 751 aaPredicted RBP10.13□□□□□ -0.79
CPNE1-221ENST00000462352 DOK1Q99704 481 aa10.13□□□□□ -0.79
CPNE1-221ENST00000462352 RASSF4Q9H2L5 321 aa10.13□□□□□ -0.79
CPNE1-221ENST00000462352 PLK3Q9H4B4 646 aa10.13□□□□□ -0.79
CPNE1-221ENST00000462352 NIPAL2Q9H841 368 aa10.13□□□□□ -0.79
CPNE1-221ENST00000462352 CBLN4Q9NTU7 201 aa10.13□□□□□ -0.79
CPNE1-221ENST00000462352 DUSP13Q9UII6 198 aa10.13□□□□□ -0.79
CPNE1-221ENST00000462352 IKZF2Q9UKS7 526 aa10.13□□□□□ -0.79
CPNE1-221ENST00000462352 RAB26Q9ULW5 256 aa10.13□□□□□ -0.79
CPNE1-221ENST00000462352 EDARQ9UNE0 448 aa10.13□□□□□ -0.79
CPNE1-221ENST00000462352 MYRFQ9Y2G1 1151 aa10.13□□□□□ -0.79
CPNE1-221ENST00000462352 NAV2Q8IVL1 2488 aa10.13□□□□□ -0.79
CPNE1-221ENST00000462352 IGLV3-9A0A075B6K5 115 aa10.12□□□□□ -0.79
CPNE1-221ENST00000462352 TMEM129A0AVI4 362 aa10.12□□□□□ -0.79
CPNE1-221ENST00000462352 DAPL1A0PJW8 107 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms