RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 TSPAN19P0C672 248 aa12.48□□□□□ -0.41
APP-211ENST00000462267 HOXB9P17482 250 aaPredicted RBP12.48□□□□□ -0.41
APP-211ENST00000462267 POLR2JP52435 117 aaKnown RBP12.48□□□□□ -0.41
APP-211ENST00000462267 RAD23AP54725 363 aa12.48□□□□□ -0.41
APP-211ENST00000462267 DOC2BQ14184 412 aa12.48□□□□□ -0.41
APP-211ENST00000462267 CMTM4Q8IZR5 234 aa12.48□□□□□ -0.41
APP-211ENST00000462267 SMYD1Q8NB12 490 aa12.48□□□□□ -0.41
APP-211ENST00000462267 PAPD5Q8NDF8 572 aaKnown RBP12.48□□□□□ -0.41
APP-211ENST00000462267 BHLHE23Q8NDY6 225 aa12.48□□□□□ -0.41
APP-211ENST00000462267 MOSPD2Q8NHP6 518 aa12.48□□□□□ -0.41
APP-211ENST00000462267 LIPHQ8WWY8 451 aa12.48□□□□□ -0.41
APP-211ENST00000462267 FAM234AQ9H0X4 552 aa12.48□□□□□ -0.41
APP-211ENST00000462267 WDR55Q9H6Y2 383 aaPredicted RBP12.48□□□□□ -0.41
APP-211ENST00000462267 SDR39U1Q9NRG7 319 aaPredicted RBP12.48□□□□□ -0.41
APP-211ENST00000462267 TENM2Q9NT68 2774 aa12.47□□□□□ -0.41
APP-211ENST00000462267 ADARB2-AS1A8MUL3 147 aa12.47□□□□□ -0.41
APP-211ENST00000462267 DVL1O14640 695 aa12.47□□□□□ -0.41
APP-211ENST00000462267 SCG5P05408 212 aa12.47□□□□□ -0.41
APP-211ENST00000462267 CD28P10747 220 aa12.47□□□□□ -0.41
APP-211ENST00000462267 BGNP21810 368 aa12.47□□□□□ -0.41
APP-211ENST00000462267 PPIBP23284 216 aaKnown RBP12.47□□□□□ -0.41
APP-211ENST00000462267 CD200P41217 278 aa12.47□□□□□ -0.41
APP-211ENST00000462267 OR8B8Q15620 311 aa12.47□□□□□ -0.41
APP-211ENST00000462267 ZBTB37Q5TC79 503 aa12.47□□□□□ -0.41
APP-211ENST00000462267 C10orf111Q8N326 155 aa12.47□□□□□ -0.41
APP-211ENST00000462267 EIF1ADQ8N9N8 165 aaKnown RBP12.47□□□□□ -0.41
APP-211ENST00000462267 BEND2Q8NDZ0 799 aa12.47□□□□□ -0.41
APP-211ENST00000462267 SLC7A6Q92536 515 aa12.47□□□□□ -0.41
APP-211ENST00000462267 APOBEC3DQ96AK3 386 aaPredicted RBP12.47□□□□□ -0.41
APP-211ENST00000462267 ECSITQ9BQ95 431 aa12.47□□□□□ -0.41
APP-211ENST00000462267 EMC7Q9NPA0 242 aa12.47□□□□□ -0.41
APP-211ENST00000462267 UFSP2Q9NUQ7 469 aa12.47□□□□□ -0.41
APP-211ENST00000462267 SLC25A37Q9NYZ2 338 aa12.47□□□□□ -0.41
APP-211ENST00000462267 ONECUT1Q9UBC0 465 aa12.47□□□□□ -0.41
APP-211ENST00000462267 SACSQ9NZJ4 4579 aa12.46□□□□□ -0.41
APP-211ENST00000462267 MEIOCA2RUB1 952 aa12.46□□□□□ -0.41
APP-211ENST00000462267 OOEPA6NGQ2 149 aa12.46□□□□□ -0.41
APP-211ENST00000462267 TRPC5OSA6NMA1 111 aa12.46□□□□□ -0.41
APP-211ENST00000462267 E9PQ18 207 aa12.46□□□□□ -0.41
APP-211ENST00000462267 H3BUX3 64 aa12.46□□□□□ -0.41
APP-211ENST00000462267 FBP2O00757 339 aa12.46□□□□□ -0.41
APP-211ENST00000462267 IGF2P01344 180 aa12.46□□□□□ -0.41
APP-211ENST00000462267 SAA4P35542 130 aa12.46□□□□□ -0.41
APP-211ENST00000462267 RPL27P61353 136 aaKnown RBP12.46□□□□□ -0.41
APP-211ENST00000462267 TOP3AQ13472 1001 aaPredicted RBP12.46□□□□□ -0.41
APP-211ENST00000462267 DCTN2Q13561 401 aaKnown RBP12.46□□□□□ -0.41
APP-211ENST00000462267 LAPTM4AQ15012 233 aa12.46□□□□□ -0.41
APP-211ENST00000462267 MPPED2Q15777 294 aa12.46□□□□□ -0.41
APP-211ENST00000462267 DUSP7Q16829 419 aa12.46□□□□□ -0.41
APP-211ENST00000462267 KLHL22Q53GT1 634 aa12.46□□□□□ -0.41
APP-211ENST00000462267 SLC2A7Q6PXP3 512 aa12.46□□□□□ -0.41
APP-211ENST00000462267 TSPYL5Q86VY4 417 aaPredicted RBP12.46□□□□□ -0.41
APP-211ENST00000462267 BOLLQ8N9W6 283 aaKnown RBP12.46□□□□□ -0.41
APP-211ENST00000462267 LY6G5BQ8NDX9 201 aa12.46□□□□□ -0.41
APP-211ENST00000462267 OR1F12Q8NHA8 337 aa12.46□□□□□ -0.41
APP-211ENST00000462267 SGTBQ96EQ0 304 aa12.46□□□□□ -0.41
APP-211ENST00000462267 PRSS27Q9BQR3 290 aa12.46□□□□□ -0.41
APP-211ENST00000462267 CPPED1Q9BRF8 314 aaPredicted RBP12.46□□□□□ -0.41
APP-211ENST00000462267 NPFFR1Q9GZQ6 430 aa12.46□□□□□ -0.41
APP-211ENST00000462267 SIRT7Q9NRC8 400 aa12.46□□□□□ -0.41
APP-211ENST00000462267 ATPIF1Q9UII2 106 aa12.46□□□□□ -0.41
APP-211ENST00000462267 GMEB1Q9Y692 573 aa12.46□□□□□ -0.41
APP-211ENST00000462267 A0A1W2PRD5 423 aa12.45□□□□□ -0.42
APP-211ENST00000462267 A0A1W2PRF3 423 aa12.45□□□□□ -0.42
APP-211ENST00000462267 A0A1W2PRM7 423 aa12.45□□□□□ -0.42
APP-211ENST00000462267 OR6C6A6NF89 314 aa12.45□□□□□ -0.42
APP-211ENST00000462267 HDAC3O15379 428 aa12.45□□□□□ -0.42
APP-211ENST00000462267 FCN3O75636 299 aa12.45□□□□□ -0.42
APP-211ENST00000462267 NHLRC4P0CG21 123 aaPredicted RBP12.45□□□□□ -0.42
APP-211ENST00000462267 FAHP16930 419 aa12.45□□□□□ -0.42
APP-211ENST00000462267 MSX2P35548 267 aaPredicted RBP12.45□□□□□ -0.42
APP-211ENST00000462267 RBM34P42696 430 aaKnown RBP12.45□□□□□ -0.42
APP-211ENST00000462267 KRTAP10-11P60412 298 aa12.45□□□□□ -0.42
APP-211ENST00000462267 HOXA4Q00056 320 aaPredicted RBP12.45□□□□□ -0.42
APP-211ENST00000462267 ACSM1Q08AH1 577 aa12.45□□□□□ -0.42
APP-211ENST00000462267 STX3Q13277 289 aa12.45□□□□□ -0.42
APP-211ENST00000462267 ALG10Q5BKT4 473 aa12.45□□□□□ -0.42
APP-211ENST00000462267 LRIF1Q5T3J3 769 aa12.45□□□□□ -0.42
APP-211ENST00000462267 PRAMEF6Q5VXH4 476 aa12.45□□□□□ -0.42
APP-211ENST00000462267 RBM45Q8IUH3 476 aaKnown RBP12.45□□□□□ -0.42
APP-211ENST00000462267 MSRB3Q8IXL7 192 aa12.45□□□□□ -0.42
APP-211ENST00000462267 GPR32P1Q8NGA4 272 aa12.45□□□□□ -0.42
APP-211ENST00000462267 OR9I1Q8NGQ6 314 aa12.45□□□□□ -0.42
APP-211ENST00000462267 LRRC8CQ8TDW0 803 aa12.45□□□□□ -0.42
APP-211ENST00000462267 ST8SIA4Q92187 359 aa12.45□□□□□ -0.42
APP-211ENST00000462267 C16orf45Q96MC5 204 aaPredicted RBP12.45□□□□□ -0.42
APP-211ENST00000462267 SSX3Q99909 188 aa12.45□□□□□ -0.42
APP-211ENST00000462267 CITED2Q99967 270 aaPredicted RBP12.45□□□□□ -0.42
APP-211ENST00000462267 HCAR1Q9BXC0 346 aa12.45□□□□□ -0.42
APP-211ENST00000462267 KAAG1Q9UBP8 84 aa12.45□□□□□ -0.42
APP-211ENST00000462267 U3KQK5 164 aa12.45□□□□□ -0.42
APP-211ENST00000462267 A6NIZ1 184 aa12.44□□□□□ -0.42
APP-211ENST00000462267 GYPAP02724 150 aa12.44□□□□□ -0.42
APP-211ENST00000462267 CD247P20963 164 aa12.44□□□□□ -0.42
APP-211ENST00000462267 UBE2E1P51965 193 aa12.44□□□□□ -0.42
APP-211ENST00000462267 RAP1BP61224 184 aa12.44□□□□□ -0.42
APP-211ENST00000462267 RAP1AP62834 184 aa12.44□□□□□ -0.42
APP-211ENST00000462267 AQP6Q13520 282 aa12.44□□□□□ -0.42
APP-211ENST00000462267 LY6EQ16553 131 aa12.44□□□□□ -0.42
APP-211ENST00000462267 BEND6Q5SZJ8 279 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms