RNA–Protein interactions for RNA: ENST00000461934.5

UBA3-205, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 2

Gene UBA3, Length 1,224 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-205	ENST00000461934	OR52L1	Q8NGH7	329 aa		11.14	□□□□□ -0.63
UBA3-205	ENST00000461934	SGMS2	Q8NHU3	365 aa		11.14	□□□□□ -0.63
UBA3-205	ENST00000461934	PYURF	Q96I23	114 aa		11.14	□□□□□ -0.63
UBA3-205	ENST00000461934	MEGF10	Q96KG7	1140 aa		11.14	□□□□□ -0.63
UBA3-205	ENST00000461934	NSMCE2	Q96MF7	247 aa		11.14	□□□□□ -0.63
UBA3-205	ENST00000461934	TSSK2	Q96PF2	358 aa		11.14	□□□□□ -0.63
UBA3-205	ENST00000461934	NMNAT3	Q96T66	252 aa		11.14	□□□□□ -0.63
UBA3-205	ENST00000461934	SSBP3	Q9BWW4	388 aa	Predicted RBP	11.14	□□□□□ -0.63
UBA3-205	ENST00000461934	RPRD1B	Q9NQG5	326 aa	Known RBP	11.14	□□□□□ -0.63
UBA3-205	ENST00000461934	MMP26	Q9NRE1	261 aa		11.14	□□□□□ -0.63
UBA3-205	ENST00000461934	ZNF446	Q9NWS9	450 aa		11.14	□□□□□ -0.63
UBA3-205	ENST00000461934	MIOX	Q9UGB7	285 aa		11.14	□□□□□ -0.63
UBA3-205	ENST00000461934	OPN4	Q9UHM6	478 aa		11.14	□□□□□ -0.63
UBA3-205	ENST00000461934	B9D1	Q9UPM9	204 aa		11.14	□□□□□ -0.63
UBA3-205	ENST00000461934	INSIG2	Q9Y5U4	225 aa		11.14	□□□□□ -0.63
UBA3-205	ENST00000461934	LHFPL6	Q9Y693	200 aa		11.14	□□□□□ -0.63
UBA3-205	ENST00000461934	CEACAM18	A8MTB9	384 aa		11.13	□□□□□ -0.63
UBA3-205	ENST00000461934	IQCF6	A8MYZ5	107 aa		11.13	□□□□□ -0.63
UBA3-205	ENST00000461934		F5H5K5	113 aa		11.13	□□□□□ -0.63
UBA3-205	ENST00000461934	CYB5R3	P00387	301 aa	Predicted RBP	11.13	□□□□□ -0.63
UBA3-205	ENST00000461934	LCAT	P04180	440 aa		11.13	□□□□□ -0.63
UBA3-205	ENST00000461934	ZNF823	P16415	610 aa		11.13	□□□□□ -0.63
UBA3-205	ENST00000461934	ZNF12	P17014	697 aa		11.13	□□□□□ -0.63
UBA3-205	ENST00000461934	CPT2	P23786	658 aa		11.13	□□□□□ -0.63
UBA3-205	ENST00000461934	SEC61A1	P61619	476 aa	Known RBP	11.13	□□□□□ -0.63
UBA3-205	ENST00000461934	UBA52	P62987	128 aa	Known RBP	11.13	□□□□□ -0.63
UBA3-205	ENST00000461934	MXRA7	P84157	204 aa		11.13	□□□□□ -0.63
UBA3-205	ENST00000461934	FOXL1	Q12952	345 aa		11.13	□□□□□ -0.63
UBA3-205	ENST00000461934	ECH1	Q13011	328 aa		11.13	□□□□□ -0.63
UBA3-205	ENST00000461934	HNRNPA0	Q13151	305 aa	Known RBP	11.13	□□□□□ -0.63
UBA3-205	ENST00000461934	RFX4	Q33E94	735 aa		11.13	□□□□□ -0.63
UBA3-205	ENST00000461934	TSEN54	Q7Z6J9	526 aa	Known RBP	11.13	□□□□□ -0.63
UBA3-205	ENST00000461934	CPLX4	Q7Z7G2	160 aa		11.13	□□□□□ -0.63
UBA3-205	ENST00000461934	MOGAT3	Q86VF5	341 aa		11.13	□□□□□ -0.63
UBA3-205	ENST00000461934	LINC00346	Q8IVM7	164 aa		11.13	□□□□□ -0.63
UBA3-205	ENST00000461934	SIGLECL1	Q8N7X8	197 aa		11.13	□□□□□ -0.63
UBA3-205	ENST00000461934	OR8B3	Q8NGG8	313 aa		11.13	□□□□□ -0.63
UBA3-205	ENST00000461934	OR52E2	Q8NGJ4	325 aa		11.13	□□□□□ -0.63
UBA3-205	ENST00000461934	OR11L1	Q8NGX0	322 aa		11.13	□□□□□ -0.63
UBA3-205	ENST00000461934	OR4K13	Q8NH42	304 aa		11.13	□□□□□ -0.63
UBA3-205	ENST00000461934	GNPDA2	Q8TDQ7	276 aa		11.13	□□□□□ -0.63
UBA3-205	ENST00000461934	NEIL1	Q96FI4	390 aa	Predicted RBP	11.13	□□□□□ -0.63
UBA3-205	ENST00000461934	C7orf34	Q96L11	122 aa		11.13	□□□□□ -0.63
UBA3-205	ENST00000461934	OR8B2	Q96RD0	313 aa		11.13	□□□□□ -0.63
UBA3-205	ENST00000461934	SIGLEC11	Q96RL6	698 aa		11.13	□□□□□ -0.63
UBA3-205	ENST00000461934	ATF6B	Q99941	703 aa		11.13	□□□□□ -0.63
UBA3-205	ENST00000461934	GORASP2	Q9H8Y8	452 aa		11.13	□□□□□ -0.63
UBA3-205	ENST00000461934	WDR76	Q9H967	626 aa		11.13	□□□□□ -0.63
UBA3-205	ENST00000461934	ZMAT3	Q9HA38	289 aa	Known RBP	11.13	□□□□□ -0.63
UBA3-205	ENST00000461934	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	11.13	□□□□□ -0.63
UBA3-205	ENST00000461934	NOP16	Q9Y3C1	178 aa	Known RBP	11.13	□□□□□ -0.63
UBA3-205	ENST00000461934	IGHV3-64D	A0A0J9YX35	117 aa		11.12	□□□□□ -0.63
UBA3-205	ENST00000461934		A8MXK9	166 aa		11.12	□□□□□ -0.63
UBA3-205	ENST00000461934		F5H0A9	414 aa	Predicted RBP	11.12	□□□□□ -0.63
UBA3-205	ENST00000461934		F5H5P2	479 aa		11.12	□□□□□ -0.63
UBA3-205	ENST00000461934		H0YL77	283 aa		11.12	□□□□□ -0.63
UBA3-205	ENST00000461934	TRAPPC2L	H3BP13	241 aa		11.12	□□□□□ -0.63
UBA3-205	ENST00000461934	ARPC3	O15145	178 aa		11.12	□□□□□ -0.63
UBA3-205	ENST00000461934	SPRY1	O43609	319 aa	Predicted RBP	11.12	□□□□□ -0.63
UBA3-205	ENST00000461934	ZNF205	O95201	554 aa		11.12	□□□□□ -0.63
UBA3-205	ENST00000461934	HIST1H1C	P16403	213 aa	Known RBP	11.12	□□□□□ -0.63
UBA3-205	ENST00000461934	RRM2	P31350	389 aa		11.12	□□□□□ -0.63
UBA3-205	ENST00000461934	RBMX	P38159	391 aa	Known RBP	11.12	□□□□□ -0.63
UBA3-205	ENST00000461934	MTNR1A	P48039	350 aa		11.12	□□□□□ -0.63
UBA3-205	ENST00000461934	TPTE	P56180	551 aa		11.12	□□□□□ -0.63
UBA3-205	ENST00000461934	FXYD6P3	P58550	94 aa		11.12	□□□□□ -0.63
UBA3-205	ENST00000461934	COX10	Q12887	443 aa		11.12	□□□□□ -0.63
UBA3-205	ENST00000461934	BAMBI	Q13145	260 aa		11.12	□□□□□ -0.63
UBA3-205	ENST00000461934	AWAT1	Q58HT5	328 aa		11.12	□□□□□ -0.63
UBA3-205	ENST00000461934	SAMD4B	Q5PRF9	694 aa	Known RBP	11.12	□□□□□ -0.63
UBA3-205	ENST00000461934	LRRN1	Q6UXK5	716 aa		11.12	□□□□□ -0.63
UBA3-205	ENST00000461934	PGAP1	Q75T13	922 aa		11.12	□□□□□ -0.63
UBA3-205	ENST00000461934	MRPL21	Q7Z2W9	205 aa	Known RBP	11.12	□□□□□ -0.63
UBA3-205	ENST00000461934	KLB	Q86Z14	1044 aa		11.12	□□□□□ -0.63
UBA3-205	ENST00000461934	OR6V1	Q8N148	313 aa		11.12	□□□□□ -0.63
UBA3-205	ENST00000461934	FAM86B1	Q8N7N1	296 aa		11.12	□□□□□ -0.63
UBA3-205	ENST00000461934	ZDHHC22	Q8N966	263 aa		11.12	□□□□□ -0.63
UBA3-205	ENST00000461934	DEFB108B	Q8NET1	73 aa		11.12	□□□□□ -0.63
UBA3-205	ENST00000461934	SDR9C7	Q8NEX9	313 aa		11.12	□□□□□ -0.63
UBA3-205	ENST00000461934	SPRYD4	Q8WW59	207 aa	Predicted RBP	11.12	□□□□□ -0.63
UBA3-205	ENST00000461934	DHRS1	Q96LJ7	313 aa		11.12	□□□□□ -0.63
UBA3-205	ENST00000461934	SLC30A2	Q9BRI3	323 aa		11.12	□□□□□ -0.63
UBA3-205	ENST00000461934	FN3K	Q9H479	309 aa		11.12	□□□□□ -0.63
UBA3-205	ENST00000461934	ESM1	Q9NQ30	184 aa		11.12	□□□□□ -0.63
UBA3-205	ENST00000461934	IGLV1-36	A0A0B4J1U3	117 aa		11.11	□□□□□ -0.63
UBA3-205	ENST00000461934	DCTN6	O00399	190 aa		11.11	□□□□□ -0.63
UBA3-205	ENST00000461934	IDH3B	O43837	385 aa		11.11	□□□□□ -0.63
UBA3-205	ENST00000461934	FSHB	P01225	129 aa		11.11	□□□□□ -0.63
UBA3-205	ENST00000461934	WNT2	P09544	360 aa		11.11	□□□□□ -0.63
UBA3-205	ENST00000461934	GGT2	P36268	569 aa		11.11	□□□□□ -0.63
UBA3-205	ENST00000461934	HIST1H3A	P68431	136 aa		11.11	□□□□□ -0.63
UBA3-205	ENST00000461934	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	11.11	□□□□□ -0.63
UBA3-205	ENST00000461934	TRAP1	Q12931	704 aa	Known RBP	11.11	□□□□□ -0.63
UBA3-205	ENST00000461934	HIST2H3PS2	Q5TEC6	136 aa		11.11	□□□□□ -0.63
UBA3-205	ENST00000461934	SLC18B1	Q6NT16	456 aa		11.11	□□□□□ -0.63
UBA3-205	ENST00000461934	RPL13AP3	Q6NVV1	102 aa		11.11	□□□□□ -0.63
UBA3-205	ENST00000461934	CFAP77	Q6ZQR2	320 aa		11.11	□□□□□ -0.63
UBA3-205	ENST00000461934	HIST2H3A	Q71DI3	136 aa		11.11	□□□□□ -0.63
UBA3-205	ENST00000461934	PGAM4	Q8N0Y7	254 aa		11.11	□□□□□ -0.63
UBA3-205	ENST00000461934	PARP8	Q8N3A8	854 aa		11.11	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms