RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 ARPC3O15145 178 aa7.52□□□□□ -1.21
LDB1-203ENST00000461873 TXNDC12O95881 172 aa7.52□□□□□ -1.21
LDB1-203ENST00000461873 IFNGP01579 166 aa7.52□□□□□ -1.21
LDB1-203ENST00000461873 IGHV2-5P01817 119 aa7.52□□□□□ -1.21
LDB1-203ENST00000461873 ADH4P08319 380 aa7.52□□□□□ -1.21
LDB1-203ENST00000461873 KITLGP21583 273 aa7.52□□□□□ -1.21
LDB1-203ENST00000461873 EPHA1P21709 976 aa7.52□□□□□ -1.21
LDB1-203ENST00000461873 GGT2P36268 569 aa7.52□□□□□ -1.21
LDB1-203ENST00000461873 CDKN2AP42771 156 aaKnown RBP7.52□□□□□ -1.21
LDB1-203ENST00000461873 LIMS1P48059 325 aa7.52□□□□□ -1.21
LDB1-203ENST00000461873 LMO4P61968 165 aa7.52□□□□□ -1.21
LDB1-203ENST00000461873 BTG1P62324 171 aa7.52□□□□□ -1.21
LDB1-203ENST00000461873 ELF3P78545 371 aaPredicted RBP7.52□□□□□ -1.21
LDB1-203ENST00000461873 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.52□□□□□ -1.21
LDB1-203ENST00000461873 MZT1Q08AG7 82 aa7.52□□□□□ -1.21
LDB1-203ENST00000461873 TSPAN31Q12999 210 aa7.52□□□□□ -1.21
LDB1-203ENST00000461873 CDK5R2Q13319 367 aa7.52□□□□□ -1.21
LDB1-203ENST00000461873 KPNB1Q14974 876 aaKnown RBP7.52□□□□□ -1.21
LDB1-203ENST00000461873 CLEC12AQ5QGZ9 265 aa7.52□□□□□ -1.21
LDB1-203ENST00000461873 SLC35F1Q5T1Q4 408 aa7.52□□□□□ -1.21
LDB1-203ENST00000461873 CORO6Q6QEF8 472 aa7.52□□□□□ -1.21
LDB1-203ENST00000461873 CYP2R1Q6VVX0 501 aa7.52□□□□□ -1.21
LDB1-203ENST00000461873 PGAP1Q75T13 922 aa7.52□□□□□ -1.21
LDB1-203ENST00000461873 NLRC3Q7RTR2 1065 aa7.52□□□□□ -1.21
LDB1-203ENST00000461873 MRPL21Q7Z2W9 205 aaKnown RBP7.52□□□□□ -1.21
LDB1-203ENST00000461873 DHFR2Q86XF0 187 aa7.52□□□□□ -1.21
LDB1-203ENST00000461873 ARHGAP24Q8N264 748 aa7.52□□□□□ -1.21
LDB1-203ENST00000461873 FAM86B1Q8N7N1 296 aa7.52□□□□□ -1.21
LDB1-203ENST00000461873 BHLHE23Q8NDY6 225 aa7.52□□□□□ -1.21
LDB1-203ENST00000461873 SDR9C7Q8NEX9 313 aa7.52□□□□□ -1.21
LDB1-203ENST00000461873 ITLN1Q8WWA0 313 aa7.52□□□□□ -1.21
LDB1-203ENST00000461873 GCDHQ92947 438 aaPredicted RBP7.52□□□□□ -1.21
LDB1-203ENST00000461873 OTULINQ96BN8 352 aa7.52□□□□□ -1.21
LDB1-203ENST00000461873 C7orf34Q96L11 122 aa7.52□□□□□ -1.21
LDB1-203ENST00000461873 OR2V2Q96R30 315 aa7.52□□□□□ -1.21
LDB1-203ENST00000461873 ATF6BQ99941 703 aa7.52□□□□□ -1.21
LDB1-203ENST00000461873 RACGAP1Q9H0H5 632 aa7.52□□□□□ -1.21
LDB1-203ENST00000461873 MUC13Q9H3R2 512 aa7.52□□□□□ -1.21
LDB1-203ENST00000461873 NTN4Q9HB63 628 aa7.52□□□□□ -1.21
LDB1-203ENST00000461873 DDX28Q9NUL7 540 aaKnown RBP7.52□□□□□ -1.21
LDB1-203ENST00000461873 CD300AQ9UGN4 299 aa7.52□□□□□ -1.21
LDB1-203ENST00000461873 KCNG2Q9UJ96 466 aa7.52□□□□□ -1.21
LDB1-203ENST00000461873 STARD10Q9Y365 291 aa7.52□□□□□ -1.21
LDB1-203ENST00000461873 CACNG2Q9Y698 323 aa7.52□□□□□ -1.21
LDB1-203ENST00000461873 LOC105371242A0A075B767 164 aa7.51□□□□□ -1.21
LDB1-203ENST00000461873 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.51□□□□□ -1.21
LDB1-203ENST00000461873 GGT3PA6NGU5 568 aa7.51□□□□□ -1.21
LDB1-203ENST00000461873 CIB2O75838 187 aa7.51□□□□□ -1.21
LDB1-203ENST00000461873 RGS9O75916 674 aaPredicted RBP7.51□□□□□ -1.21
LDB1-203ENST00000461873 SCG5P05408 212 aa7.51□□□□□ -1.21
LDB1-203ENST00000461873 RPS2P15880 293 aaKnown RBP7.51□□□□□ -1.21
LDB1-203ENST00000461873 HIST1H1CP16403 213 aaKnown RBP7.51□□□□□ -1.21
LDB1-203ENST00000461873 MDH2P40926 338 aaKnown RBP7.51□□□□□ -1.21
LDB1-203ENST00000461873 BLVRAP53004 296 aa7.51□□□□□ -1.21
LDB1-203ENST00000461873 SRSF2Q01130 221 aaKnown RBP7.51□□□□□ -1.21
LDB1-203ENST00000461873 FHL1Q13642 323 aa7.51□□□□□ -1.21
LDB1-203ENST00000461873 SEC23BQ15437 767 aa7.51□□□□□ -1.21
LDB1-203ENST00000461873 KCNJ8Q15842 424 aa7.51□□□□□ -1.21
LDB1-203ENST00000461873 KCNMB1Q16558 191 aa7.51□□□□□ -1.21
LDB1-203ENST00000461873 MEP1BQ16820 701 aa7.51□□□□□ -1.21
LDB1-203ENST00000461873 TMEM155Q4W5P6 130 aa7.51□□□□□ -1.21
LDB1-203ENST00000461873 CCDC92Q53HC0 331 aaPredicted RBP7.51□□□□□ -1.21
LDB1-203ENST00000461873 OR2T2Q6IF00 324 aa7.51□□□□□ -1.21
LDB1-203ENST00000461873 PTCHD4Q6ZW05 846 aa7.51□□□□□ -1.21
LDB1-203ENST00000461873 LINC00346Q8IVM7 164 aa7.51□□□□□ -1.21
LDB1-203ENST00000461873 OR6V1Q8N148 313 aa7.51□□□□□ -1.21
LDB1-203ENST00000461873 ZNF283Q8N7M2 679 aa7.51□□□□□ -1.21
LDB1-203ENST00000461873 OR8G5Q8NG78 346 aa7.51□□□□□ -1.21
LDB1-203ENST00000461873 ZFAND2BQ8WV99 257 aa7.51□□□□□ -1.21
LDB1-203ENST00000461873 SLC7A6Q92536 515 aa7.51□□□□□ -1.21
LDB1-203ENST00000461873 DHRS1Q96LJ7 313 aa7.51□□□□□ -1.21
LDB1-203ENST00000461873 TSSK2Q96PF2 358 aa7.51□□□□□ -1.21
LDB1-203ENST00000461873 GPA33Q99795 319 aa7.51□□□□□ -1.21
LDB1-203ENST00000461873 COPS4Q9BT78 406 aa7.51□□□□□ -1.21
LDB1-203ENST00000461873 RBM4Q9BWF3 364 aaKnown RBP7.51□□□□□ -1.21
LDB1-203ENST00000461873 SLC22A4Q9H015 551 aa7.51□□□□□ -1.21
LDB1-203ENST00000461873 SP140LQ9H930 580 aa7.51□□□□□ -1.21
LDB1-203ENST00000461873 ZNF556Q9HAH1 456 aa7.51□□□□□ -1.21
LDB1-203ENST00000461873 ACTR3BQ9P1U1 418 aa7.51□□□□□ -1.21
LDB1-203ENST00000461873 KIF17Q9P2E2 1029 aa7.51□□□□□ -1.21
LDB1-203ENST00000461873 KLHL21Q9UJP4 597 aa7.51□□□□□ -1.21
LDB1-203ENST00000461873 PRPF19Q9UMS4 504 aaKnown RBP7.51□□□□□ -1.21
LDB1-203ENST00000461873 BAIAP2Q9UQB8 552 aa7.51□□□□□ -1.21
LDB1-203ENST00000461873 POMPQ9Y244 141 aa7.51□□□□□ -1.21
LDB1-203ENST00000461873 N6AMT1Q9Y5N5 214 aa7.51□□□□□ -1.21
LDB1-203ENST00000461873 SVEP1Q4LDE5 3571 aa7.5□□□□□ -1.21
LDB1-203ENST00000461873 RIIAD1A6NNX1 92 aa7.5□□□□□ -1.21
LDB1-203ENST00000461873 H3BN98 237 aa7.5□□□□□ -1.21
LDB1-203ENST00000461873 DBHP09172 617 aa7.5□□□□□ -1.21
LDB1-203ENST00000461873 SPARCP09486 303 aa7.5□□□□□ -1.21
LDB1-203ENST00000461873 ZNF26P17031 533 aaPredicted RBP7.5□□□□□ -1.21
LDB1-203ENST00000461873 ZNF3P17036 446 aa7.5□□□□□ -1.21
LDB1-203ENST00000461873 FUT4P22083 530 aa7.5□□□□□ -1.21
LDB1-203ENST00000461873 PAICSP22234 425 aaKnown RBP7.5□□□□□ -1.21
LDB1-203ENST00000461873 CPT2P23786 658 aa7.5□□□□□ -1.21
LDB1-203ENST00000461873 HSD11B1P28845 292 aa7.5□□□□□ -1.21
LDB1-203ENST00000461873 FMO3P31513 532 aa7.5□□□□□ -1.21
LDB1-203ENST00000461873 SLC15A1P46059 708 aa7.5□□□□□ -1.21
LDB1-203ENST00000461873 GNB2P62879 340 aa7.5□□□□□ -1.21
LDB1-203ENST00000461873 COX10Q12887 443 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms