RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 CALHM1Q8IU99 346 aa1.93□□□□□ -2.1
HDAC6-212ENST00000461608 MYOCDQ8IZQ8 938 aa1.93□□□□□ -2.1
HDAC6-212ENST00000461608 VKORC1L1Q8N0U8 176 aa1.93□□□□□ -2.1
HDAC6-212ENST00000461608 NPWQ8N729 165 aa1.93□□□□□ -2.1
HDAC6-212ENST00000461608 FAM86B1Q8N7N1 296 aa1.93□□□□□ -2.1
HDAC6-212ENST00000461608 C15orf56Q8N910 161 aa1.93□□□□□ -2.1
HDAC6-212ENST00000461608 OR56A4Q8NGH8 313 aa1.93□□□□□ -2.1
HDAC6-212ENST00000461608 OR52K1Q8NGK4 314 aa1.93□□□□□ -2.1
HDAC6-212ENST00000461608 OR2L8Q8NGY9 312 aa1.93□□□□□ -2.1
HDAC6-212ENST00000461608 OR52E5Q8NH55 327 aa1.93□□□□□ -2.1
HDAC6-212ENST00000461608 ITFG1Q8TB96 612 aa1.93□□□□□ -2.1
HDAC6-212ENST00000461608 RGP1Q92546 391 aaPredicted RBP1.93□□□□□ -2.1
HDAC6-212ENST00000461608 RPEQ96AT9 228 aa1.93□□□□□ -2.1
HDAC6-212ENST00000461608 NRBF2Q96F24 287 aa1.93□□□□□ -2.1
HDAC6-212ENST00000461608 PDXPQ96GD0 296 aa1.93□□□□□ -2.1
HDAC6-212ENST00000461608 LINC00167Q96N53 147 aa1.93□□□□□ -2.1
HDAC6-212ENST00000461608 ZNF382Q96SR6 550 aa1.93□□□□□ -2.1
HDAC6-212ENST00000461608 TEAD3Q99594 435 aa1.93□□□□□ -2.1
HDAC6-212ENST00000461608 NDFIP1Q9BT67 221 aa1.93□□□□□ -2.1
HDAC6-212ENST00000461608 VCXQ9H320 206 aa1.93□□□□□ -2.1
HDAC6-212ENST00000461608 CYP3A43Q9HB55 503 aa1.93□□□□□ -2.1
HDAC6-212ENST00000461608 CD209Q9NNX6 404 aa1.93□□□□□ -2.1
HDAC6-212ENST00000461608 AGPAT4Q9NRZ5 378 aa1.93□□□□□ -2.1
HDAC6-212ENST00000461608 PTTG3PQ9NZH4 202 aa1.93□□□□□ -2.1
HDAC6-212ENST00000461608 ZNRD1Q9P1U0 126 aa1.93□□□□□ -2.1
HDAC6-212ENST00000461608 KLK12Q9UKR0 248 aa1.93□□□□□ -2.1
HDAC6-212ENST00000461608 YARS2Q9Y2Z4 477 aaKnown RBP1.93□□□□□ -2.1
HDAC6-212ENST00000461608 COL16A1Q07092 1604 aaPredicted RBP1.92□□□□□ -2.1
HDAC6-212ENST00000461608 IGLV4-60A0A075B6I1 120 aa1.92□□□□□ -2.1
HDAC6-212ENST00000461608 IGLV1-36A0A0B4J1U3 117 aa1.92□□□□□ -2.1
HDAC6-212ENST00000461608 IGHV1OR15-9A0A0B4J2B8 117 aa1.92□□□□□ -2.1
HDAC6-212ENST00000461608 A0A1W2PP18 115 aa1.92□□□□□ -2.1
HDAC6-212ENST00000461608 TMEM223A0PJW6 202 aa1.92□□□□□ -2.1
HDAC6-212ENST00000461608 C11orf94C9JXX5 98 aa1.92□□□□□ -2.1
HDAC6-212ENST00000461608 ZNF701M0R085 212 aaPredicted RBP1.92□□□□□ -2.1
HDAC6-212ENST00000461608 DNASE2O00115 360 aaPredicted RBP1.92□□□□□ -2.1
HDAC6-212ENST00000461608 SLC9A3R1O14745 358 aaPredicted RBP1.92□□□□□ -2.1
HDAC6-212ENST00000461608 TAAR5O14804 337 aa1.92□□□□□ -2.1
HDAC6-212ENST00000461608 B4GALT5O43286 388 aa1.92□□□□□ -2.1
HDAC6-212ENST00000461608 ERI3O43414 337 aaKnown RBP1.92□□□□□ -2.1
HDAC6-212ENST00000461608 AKR7A2O43488 359 aa1.92□□□□□ -2.1
HDAC6-212ENST00000461608 SLC22A5O76082 557 aa1.92□□□□□ -2.1
HDAC6-212ENST00000461608 VAMP5O95183 116 aa1.92□□□□□ -2.1
HDAC6-212ENST00000461608 OTCP00480 354 aa1.92□□□□□ -2.1
HDAC6-212ENST00000461608 CTSLP07711 333 aa1.92□□□□□ -2.1
HDAC6-212ENST00000461608 KRT16P08779 473 aa1.92□□□□□ -2.1
HDAC6-212ENST00000461608 TCN2P20062 427 aa1.92□□□□□ -2.1
HDAC6-212ENST00000461608 RFC3P40938 356 aa1.92□□□□□ -2.1
HDAC6-212ENST00000461608 SLC1A2P43004 574 aa1.92□□□□□ -2.1
HDAC6-212ENST00000461608 ERFP50548 548 aa1.92□□□□□ -2.1
HDAC6-212ENST00000461608 KRTAP10-1P60331 282 aa1.92□□□□□ -2.1
HDAC6-212ENST00000461608 YWHAEP62258 255 aaKnown RBP1.92□□□□□ -2.1
HDAC6-212ENST00000461608 ESRRGP62508 458 aa1.92□□□□□ -2.1
HDAC6-212ENST00000461608 IRF8Q02556 426 aa1.92□□□□□ -2.1
HDAC6-212ENST00000461608 RGNQ15493 299 aa1.92□□□□□ -2.1
HDAC6-212ENST00000461608 NKAIN1Q4KMZ8 207 aa1.92□□□□□ -2.1
HDAC6-212ENST00000461608 HIKESHIQ53FT3 197 aa1.92□□□□□ -2.1
HDAC6-212ENST00000461608 CAVIN4Q5BKX8 364 aa1.92□□□□□ -2.1
HDAC6-212ENST00000461608 TPRG1LQ5T0D9 272 aa1.92□□□□□ -2.1
HDAC6-212ENST00000461608 FAM71E1Q6IPT2 247 aa1.92□□□□□ -2.1
HDAC6-212ENST00000461608 KRTAP11-1Q8IUC1 163 aa1.92□□□□□ -2.1
HDAC6-212ENST00000461608 CMTM8Q8IZV2 173 aa1.92□□□□□ -2.1
HDAC6-212ENST00000461608 CYB561D1Q8N8Q1 229 aa1.92□□□□□ -2.1
HDAC6-212ENST00000461608 COX18Q8N8Q8 333 aa1.92□□□□□ -2.1
HDAC6-212ENST00000461608 LRRC75AQ8NAA5 344 aa1.92□□□□□ -2.1
HDAC6-212ENST00000461608 UBAC2Q8NBM4 344 aa1.92□□□□□ -2.1
HDAC6-212ENST00000461608 OR11H7Q8NGC8 314 aa1.92□□□□□ -2.1
HDAC6-212ENST00000461608 OR5T3Q8NGG3 340 aa1.92□□□□□ -2.1
HDAC6-212ENST00000461608 COQ8AQ8NI60 647 aa1.92□□□□□ -2.1
HDAC6-212ENST00000461608 C15orf40Q8WUR7 153 aa1.92□□□□□ -2.1
HDAC6-212ENST00000461608 LRRC29Q8WV35 223 aa1.92□□□□□ -2.1
HDAC6-212ENST00000461608 FAM104AQ969W3 186 aa1.92□□□□□ -2.1
HDAC6-212ENST00000461608 TIMM17AQ99595 171 aa1.92□□□□□ -2.1
HDAC6-212ENST00000461608 HSD17B10Q99714 261 aaKnown RBP1.92□□□□□ -2.1
HDAC6-212ENST00000461608 C8orf33Q9H7E9 229 aaPredicted RBP1.92□□□□□ -2.1
HDAC6-212ENST00000461608 MYOZ1Q9NP98 299 aaPredicted RBP1.92□□□□□ -2.1
HDAC6-212ENST00000461608 PSG11Q9UQ72 335 aa1.92□□□□□ -2.1
HDAC6-212ENST00000461608 PALLDQ8WX93 1383 aa1.92□□□□□ -2.1
HDAC6-212ENST00000461608 UBN2Q6ZU65 1347 aa1.91□□□□□ -2.1
HDAC6-212ENST00000461608 TET2Q6N021 2002 aaPredicted RBP1.91□□□□□ -2.1
HDAC6-212ENST00000461608 PRRC2AP48634 2157 aaKnown RBP1.91□□□□□ -2.1
HDAC6-212ENST00000461608 A0A0U1RQV1 116 aa1.91□□□□□ -2.1
HDAC6-212ENST00000461608 A0A1B0GVX0 72 aa1.91□□□□□ -2.1
HDAC6-212ENST00000461608 GOLGA8JA6NMD2 632 aa1.91□□□□□ -2.1
HDAC6-212ENST00000461608 SERPINE3A8MV23 424 aa1.91□□□□□ -2.1
HDAC6-212ENST00000461608 PLPP1O14494 284 aa1.91□□□□□ -2.1
HDAC6-212ENST00000461608 BPY2O14599 106 aa1.91□□□□□ -2.1
HDAC6-212ENST00000461608 RAD51BO15315 384 aa1.91□□□□□ -2.1
HDAC6-212ENST00000461608 RAD1O60671 282 aa1.91□□□□□ -2.1
HDAC6-212ENST00000461608 YIF1AO95070 293 aa1.91□□□□□ -2.1
HDAC6-212ENST00000461608 GOLGA8HP0CJ92 632 aa1.91□□□□□ -2.1
HDAC6-212ENST00000461608 C1GALT1C1LP0DN25 315 aa1.91□□□□□ -2.1
HDAC6-212ENST00000461608 GZMAP12544 262 aa1.91□□□□□ -2.1
HDAC6-212ENST00000461608 IGFBP3P17936 291 aaPredicted RBP1.91□□□□□ -2.1
HDAC6-212ENST00000461608 CSNK2A2P19784 350 aaPredicted RBP1.91□□□□□ -2.1
HDAC6-212ENST00000461608 USF1P22415 310 aaPredicted RBP1.91□□□□□ -2.1
HDAC6-212ENST00000461608 RBM34P42696 430 aaKnown RBP1.91□□□□□ -2.1
HDAC6-212ENST00000461608 PPICP45877 212 aa1.91□□□□□ -2.1
HDAC6-212ENST00000461608 PPIDQ08752 370 aaKnown RBP1.91□□□□□ -2.1
HDAC6-212ENST00000461608 MADCAM1Q13477 382 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms