RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 HOXA9P31269 272 aa2.48□□□□□ -2.01
CLK1-206ENST00000461326 GPX4P36969 197 aaPredicted RBP2.48□□□□□ -2.01
CLK1-206ENST00000461326 TNFSF9P41273 254 aa2.48□□□□□ -2.01
CLK1-206ENST00000461326 CSNK1EP49674 416 aaKnown RBP2.48□□□□□ -2.01
CLK1-206ENST00000461326 CRISP3P54108 245 aa2.48□□□□□ -2.01
CLK1-206ENST00000461326 SP4Q02446 784 aa2.48□□□□□ -2.01
CLK1-206ENST00000461326 REG3AQ06141 175 aa2.48□□□□□ -2.01
CLK1-206ENST00000461326 TRAM2Q15035 370 aa2.48□□□□□ -2.01
CLK1-206ENST00000461326 NCF4Q15080 339 aa2.48□□□□□ -2.01
CLK1-206ENST00000461326 PSMD5Q16401 504 aa2.48□□□□□ -2.01
CLK1-206ENST00000461326 KCTD19Q17RG1 926 aaPredicted RBP2.48□□□□□ -2.01
CLK1-206ENST00000461326 C1orf185Q5T7R7 199 aa2.48□□□□□ -2.01
CLK1-206ENST00000461326 STUMQ69YW2 141 aa2.48□□□□□ -2.01
CLK1-206ENST00000461326 LINC00173Q6ZV60 143 aa2.48□□□□□ -2.01
CLK1-206ENST00000461326 LINC01551Q86U37 167 aa2.48□□□□□ -2.01
CLK1-206ENST00000461326 PCP2Q8IVA1 136 aa2.48□□□□□ -2.01
CLK1-206ENST00000461326 KATNAL2Q8IYT4 538 aa2.48□□□□□ -2.01
CLK1-206ENST00000461326 CMTM1Q8IZ96 169 aa2.48□□□□□ -2.01
CLK1-206ENST00000461326 OFCC1Q8IZS5 231 aa2.48□□□□□ -2.01
CLK1-206ENST00000461326 STPG2Q8N412 459 aa2.48□□□□□ -2.01
CLK1-206ENST00000461326 PRELID2Q8N945 189 aa2.48□□□□□ -2.01
CLK1-206ENST00000461326 BPIFCQ8NFQ6 507 aa2.48□□□□□ -2.01
CLK1-206ENST00000461326 OR10J6PQ8NGY7 276 aa2.48□□□□□ -2.01
CLK1-206ENST00000461326 OR5K2Q8NHB8 316 aa2.48□□□□□ -2.01
CLK1-206ENST00000461326 LYPD6BQ8NI32 183 aa2.48□□□□□ -2.01
CLK1-206ENST00000461326 SRSF12Q8WXF0 261 aaKnown RBP2.48□□□□□ -2.01
CLK1-206ENST00000461326 IL22RA2Q969J5 263 aa2.48□□□□□ -2.01
CLK1-206ENST00000461326 NTAN1Q96AB6 310 aa2.48□□□□□ -2.01
CLK1-206ENST00000461326 GALNT14Q96FL9 552 aa2.48□□□□□ -2.01
CLK1-206ENST00000461326 JSRP1Q96MG2 331 aaPredicted RBP2.48□□□□□ -2.01
CLK1-206ENST00000461326 OR5B12Q96R08 314 aa2.48□□□□□ -2.01
CLK1-206ENST00000461326 HDHD3Q9BSH5 251 aaPredicted RBP2.48□□□□□ -2.01
CLK1-206ENST00000461326 ELOVL6Q9H5J4 265 aa2.48□□□□□ -2.01
CLK1-206ENST00000461326 KCNJ16Q9NPI9 418 aa2.48□□□□□ -2.01
CLK1-206ENST00000461326 MRPL22Q9NWU5 206 aaKnown RBP2.48□□□□□ -2.01
CLK1-206ENST00000461326 PSME2Q9UL46 239 aa2.48□□□□□ -2.01
CLK1-206ENST00000461326 WSB1Q9Y6I7 421 aa2.48□□□□□ -2.01
CLK1-206ENST00000461326 LRRC37A3O60309 1634 aa2.48□□□□□ -2.01
CLK1-206ENST00000461326 CRB1P82279 1406 aa2.48□□□□□ -2.01
CLK1-206ENST00000461326 ABCC6O95255 1503 aa2.47□□□□□ -2.01
CLK1-206ENST00000461326 MAP3K19Q56UN5 1328 aa2.47□□□□□ -2.01
CLK1-206ENST00000461326 MAP3K15Q6ZN16 1313 aa2.47□□□□□ -2.01
CLK1-206ENST00000461326 PIKFYVEQ9Y2I7 2098 aa2.47□□□□□ -2.01
CLK1-206ENST00000461326 TRAV25A0A0B4J276 109 aa2.47□□□□□ -2.01
CLK1-206ENST00000461326 A6NDN8 102 aa2.47□□□□□ -2.01
CLK1-206ENST00000461326 SPECC1L-ADORA2AF8WAN1 911 aa2.47□□□□□ -2.01
CLK1-206ENST00000461326 INS-IGF2F8WCM5 200 aa2.47□□□□□ -2.01
CLK1-206ENST00000461326 L7N2F9 121 aa2.47□□□□□ -2.01
CLK1-206ENST00000461326 EIF3HO15372 352 aaKnown RBP eCLIP2.47□□□□□ -2.01
CLK1-206ENST00000461326 CLDN11O75508 207 aa2.47□□□□□ -2.01
CLK1-206ENST00000461326 AQP8O94778 261 aa2.47□□□□□ -2.01
CLK1-206ENST00000461326 ZNF250P15622 560 aa2.47□□□□□ -2.01
CLK1-206ENST00000461326 BCKDHBP21953 392 aa2.47□□□□□ -2.01
CLK1-206ENST00000461326 RPS10P46783 165 aaKnown RBP2.47□□□□□ -2.01
CLK1-206ENST00000461326 EIF3EP60228 445 aaKnown RBP2.47□□□□□ -2.01
CLK1-206ENST00000461326 SPAG1Q07617 926 aa2.47□□□□□ -2.01
CLK1-206ENST00000461326 IFT88Q13099 833 aa2.47□□□□□ -2.01
CLK1-206ENST00000461326 GINS1Q14691 196 aa2.47□□□□□ -2.01
CLK1-206ENST00000461326 ZNF726P1Q15940 193 aa2.47□□□□□ -2.01
CLK1-206ENST00000461326 UBE2SQ16763 222 aa2.47□□□□□ -2.01
CLK1-206ENST00000461326 SOHLH1Q5JUK2 328 aa2.47□□□□□ -2.01
CLK1-206ENST00000461326 HES5Q5TA89 166 aa2.47□□□□□ -2.01
CLK1-206ENST00000461326 TSPO2Q5TGU0 170 aa2.47□□□□□ -2.01
CLK1-206ENST00000461326 ANGPTL8Q6UXH0 198 aa2.47□□□□□ -2.01
CLK1-206ENST00000461326 TMCO2Q7Z6W1 182 aaPredicted RBP2.47□□□□□ -2.01
CLK1-206ENST00000461326 APRG1Q8IVJ8 170 aa2.47□□□□□ -2.01
CLK1-206ENST00000461326 ZNF433Q8N7K0 673 aaPredicted RBP2.47□□□□□ -2.01
CLK1-206ENST00000461326 Q8N9L7 120 aa2.47□□□□□ -2.01
CLK1-206ENST00000461326 NOXO1Q8NFA2 376 aa2.47□□□□□ -2.01
CLK1-206ENST00000461326 OR9G4Q8NGQ1 327 aa2.47□□□□□ -2.01
CLK1-206ENST00000461326 AGR3Q8TD06 166 aa2.47□□□□□ -2.01
CLK1-206ENST00000461326 DUS3LQ96G46 650 aaKnown RBP2.47□□□□□ -2.01
CLK1-206ENST00000461326 CEP170P1Q96L14 293 aa2.47□□□□□ -2.01
CLK1-206ENST00000461326 WFIKKN1Q96NZ8 548 aa2.47□□□□□ -2.01
CLK1-206ENST00000461326 MICU1Q9BPX6 476 aa2.47□□□□□ -2.01
CLK1-206ENST00000461326 BPIFA3Q9BQP9 254 aa2.47□□□□□ -2.01
CLK1-206ENST00000461326 SLC25A2Q9BXI2 301 aa2.47□□□□□ -2.01
CLK1-206ENST00000461326 SLC17A9Q9BYT1 436 aa2.47□□□□□ -2.01
CLK1-206ENST00000461326 ZYG11BQ9C0D3 744 aa2.47□□□□□ -2.01
CLK1-206ENST00000461326 ACTR3CQ9C0K3 210 aaPredicted RBP2.47□□□□□ -2.01
CLK1-206ENST00000461326 NEUROG2Q9H2A3 272 aa2.47□□□□□ -2.01
CLK1-206ENST00000461326 IFI27L2Q9H2X8 130 aa2.47□□□□□ -2.01
CLK1-206ENST00000461326 CCNB1IP1Q9NPC3 277 aa2.47□□□□□ -2.01
CLK1-206ENST00000461326 LHX9Q9NQ69 397 aa2.47□□□□□ -2.01
CLK1-206ENST00000461326 TBC1D24Q9ULP9 559 aa2.47□□□□□ -2.01
CLK1-206ENST00000461326 PRG3Q9Y2Y8 225 aaPredicted RBP2.47□□□□□ -2.01
CLK1-206ENST00000461326 BLMP54132 1417 aaPredicted RBP2.47□□□□□ -2.01
CLK1-206ENST00000461326 SMG6Q86US8 1419 aaKnown RBP2.47□□□□□ -2.01
CLK1-206ENST00000461326 RGPD1P0DJD0 1748 aa2.47□□□□□ -2.01
CLK1-206ENST00000461326 TNS1Q9HBL0 1735 aaKnown RBP2.47□□□□□ -2.01
CLK1-206ENST00000461326 RTL1A6NKG5 1358 aa2.47□□□□□ -2.01
CLK1-206ENST00000461326 INSRP06213 1382 aa2.47□□□□□ -2.01
CLK1-206ENST00000461326 FLT4P35916 1363 aa2.47□□□□□ -2.01
CLK1-206ENST00000461326 SBF2Q86WG5 1849 aa2.47□□□□□ -2.01
CLK1-206ENST00000461326 WDR19Q8NEZ3 1342 aa2.46□□□□□ -2.02
CLK1-206ENST00000461326 TET2Q6N021 2002 aaPredicted RBP2.46□□□□□ -2.02
CLK1-206ENST00000461326 DOT1LQ8TEK3 1739 aa2.46□□□□□ -2.02
CLK1-206ENST00000461326 SHANK3Q9BYB0 1731 aa2.46□□□□□ -2.02
CLK1-206ENST00000461326 CIB4A0PJX0 185 aa2.46□□□□□ -2.02
CLK1-206ENST00000461326 H0YHG0 523 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms