RNA–Protein interactions for RNA: ENST00000461041.1

SNAPC3-204, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 2

Gene SNAPC3, Length 403 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-204ENST00000461041 GTF3AQ92664 365 aaKnown RBP17.13■□□□□ 0.33
SNAPC3-204ENST00000461041 STMN2Q93045 179 aa17.13■□□□□ 0.33
SNAPC3-204ENST00000461041 SPTSSAQ969W0 71 aa17.13■□□□□ 0.33
SNAPC3-204ENST00000461041 C1QTNF5Q9BXJ0 243 aa17.13■□□□□ 0.33
SNAPC3-204ENST00000461041 REG4Q9BYZ8 158 aa17.13■□□□□ 0.33
SNAPC3-204ENST00000461041 MYOZ1Q9NP98 299 aaPredicted RBP17.13■□□□□ 0.33
SNAPC3-204ENST00000461041 CENPMQ9NSP4 180 aa17.13■□□□□ 0.33
SNAPC3-204ENST00000461041 PTTG3PQ9NZH4 202 aa17.13■□□□□ 0.33
SNAPC3-204ENST00000461041 M0R135 149 aa17.12■□□□□ 0.33
SNAPC3-204ENST00000461041 TLX2O43763 284 aaPredicted RBP17.12■□□□□ 0.33
SNAPC3-204ENST00000461041 MT-ND5P03915 603 aa17.12■□□□□ 0.33
SNAPC3-204ENST00000461041 DAOP14920 347 aa17.12■□□□□ 0.33
SNAPC3-204ENST00000461041 OTX1P32242 354 aaPredicted RBP17.12■□□□□ 0.33
SNAPC3-204ENST00000461041 MMP15P51511 669 aa17.12■□□□□ 0.33
SNAPC3-204ENST00000461041 ALDH3A2P51648 485 aa17.12■□□□□ 0.33
SNAPC3-204ENST00000461041 CBR4Q8N4T8 237 aa17.12■□□□□ 0.33
SNAPC3-204ENST00000461041 TMEM163Q8TC26 289 aa17.12■□□□□ 0.33
SNAPC3-204ENST00000461041 CMBLQ96DG6 245 aa17.12■□□□□ 0.33
SNAPC3-204ENST00000461041 ZNF799Q96GE5 643 aa17.12■□□□□ 0.33
SNAPC3-204ENST00000461041 COPS4Q9BT78 406 aa17.12■□□□□ 0.33
SNAPC3-204ENST00000461041 ABHD6Q9BV23 337 aa17.12■□□□□ 0.33
SNAPC3-204ENST00000461041 ORC6Q9Y5N6 252 aa17.12■□□□□ 0.33
SNAPC3-204ENST00000461041 VPS13CQ709C8 3753 aa17.11■□□□□ 0.33
SNAPC3-204ENST00000461041 FLNAP21333 2647 aaKnown RBP17.11■□□□□ 0.33
SNAPC3-204ENST00000461041 CCDC182A6NF36 153 aa17.11■□□□□ 0.33
SNAPC3-204ENST00000461041 ZNF878C9JN71 531 aa17.11■□□□□ 0.33
SNAPC3-204ENST00000461041 ANKRD65E5RJM6 399 aa17.11■□□□□ 0.33
SNAPC3-204ENST00000461041 NAA10P41227 235 aaPredicted RBP17.11■□□□□ 0.33
SNAPC3-204ENST00000461041 HLXQ14774 488 aaPredicted RBP17.11■□□□□ 0.33
SNAPC3-204ENST00000461041 TAF13Q15543 124 aa17.11■□□□□ 0.33
SNAPC3-204ENST00000461041 CARTPTQ16568 116 aa17.11■□□□□ 0.33
SNAPC3-204ENST00000461041 SPATC1Q76KD6 591 aa17.11■□□□□ 0.33
SNAPC3-204ENST00000461041 BCDIN3DQ7Z5W3 292 aaKnown RBP17.11■□□□□ 0.33
SNAPC3-204ENST00000461041 UBASH3BQ8TF42 649 aa17.11■□□□□ 0.33
SNAPC3-204ENST00000461041 HAVCR1Q96D42 359 aa17.11■□□□□ 0.33
SNAPC3-204ENST00000461041 IL4I1Q96RQ9 567 aa17.11■□□□□ 0.33
SNAPC3-204ENST00000461041 AMELYQ99218 206 aa17.11■□□□□ 0.33
SNAPC3-204ENST00000461041 TEAD3Q99594 435 aa17.11■□□□□ 0.33
SNAPC3-204ENST00000461041 KCNJ15Q99712 375 aa17.11■□□□□ 0.33
SNAPC3-204ENST00000461041 C9orf16Q9BUW7 83 aa17.11■□□□□ 0.33
SNAPC3-204ENST00000461041 CGGBP1Q9UFW8 167 aaPredicted RBP17.11■□□□□ 0.33
SNAPC3-204ENST00000461041 PURGQ9UJV8 347 aaKnown RBP17.11■□□□□ 0.33
SNAPC3-204ENST00000461041 LOC390937A0A1W2PQ73 354 aa17.1■□□□□ 0.33
SNAPC3-204ENST00000461041 PLSCR5A0PG75 271 aa17.1■□□□□ 0.33
SNAPC3-204ENST00000461041 ZSCAN5BA6NJL1 495 aa17.1■□□□□ 0.33
SNAPC3-204ENST00000461041 TIMM8AO60220 97 aaPredicted RBP17.1■□□□□ 0.33
SNAPC3-204ENST00000461041 NCR1O76036 304 aa17.1■□□□□ 0.33
SNAPC3-204ENST00000461041 BAG2O95816 211 aa17.1■□□□□ 0.33
SNAPC3-204ENST00000461041 HPXP02790 462 aa17.1■□□□□ 0.33
SNAPC3-204ENST00000461041 LCATP04180 440 aa17.1■□□□□ 0.33
SNAPC3-204ENST00000461041 RAC2P15153 192 aa17.1■□□□□ 0.33
SNAPC3-204ENST00000461041 SLC25A16P16260 332 aa17.1■□□□□ 0.33
SNAPC3-204ENST00000461041 KITLGP21583 273 aa17.1■□□□□ 0.33
SNAPC3-204ENST00000461041 MAGEB1P43366 347 aa17.1■□□□□ 0.33
SNAPC3-204ENST00000461041 ZNF81P51508 661 aa17.1■□□□□ 0.33
SNAPC3-204ENST00000461041 RAD23AP54725 363 aa17.1■□□□□ 0.33
SNAPC3-204ENST00000461041 PCGF3Q3KNV8 242 aa17.1■□□□□ 0.33
SNAPC3-204ENST00000461041 LCN1P1Q5VSP4 162 aa17.1■□□□□ 0.33
SNAPC3-204ENST00000461041 AADACL4Q5VUY2 407 aa17.1■□□□□ 0.33
SNAPC3-204ENST00000461041 FBXW12Q6X9E4 464 aa17.1■□□□□ 0.33
SNAPC3-204ENST00000461041 ZNF786Q8N393 782 aa17.1■□□□□ 0.33
SNAPC3-204ENST00000461041 MAPK1IP1LQ8NDC0 245 aa17.1■□□□□ 0.33
SNAPC3-204ENST00000461041 OTOSQ8NHW6 89 aa17.1■□□□□ 0.33
SNAPC3-204ENST00000461041 RNF133Q8WVZ7 376 aa17.1■□□□□ 0.33
SNAPC3-204ENST00000461041 SMR3AQ99954 134 aa17.1■□□□□ 0.33
SNAPC3-204ENST00000461041 CYSLTR2Q9NS75 346 aa17.1■□□□□ 0.33
SNAPC3-204ENST00000461041 NKIRAS2Q9NYR9 191 aa17.1■□□□□ 0.33
SNAPC3-204ENST00000461041 H2AFY2Q9P0M6 372 aaPredicted RBP17.1■□□□□ 0.33
SNAPC3-204ENST00000461041 LYNX1G3V0Z9 82 aa17.09■□□□□ 0.33
SNAPC3-204ENST00000461041 NDUFS8O00217 210 aa17.09■□□□□ 0.33
SNAPC3-204ENST00000461041 LYNX1P0DP58 116 aa17.09■□□□□ 0.33
SNAPC3-204ENST00000461041 LIPAP38571 399 aa17.09■□□□□ 0.33
SNAPC3-204ENST00000461041 SLC15A1P46059 708 aa17.09■□□□□ 0.33
SNAPC3-204ENST00000461041 SLC6A9P48067 706 aa17.09■□□□□ 0.33
SNAPC3-204ENST00000461041 PRKXP51817 358 aa17.09■□□□□ 0.33
SNAPC3-204ENST00000461041 GRB2P62993 217 aaKnown RBP17.09■□□□□ 0.33
SNAPC3-204ENST00000461041 ZIK1Q3SY52 487 aaPredicted RBP17.09■□□□□ 0.33
SNAPC3-204ENST00000461041 NXNL2Q5VZ03 156 aa17.09■□□□□ 0.33
SNAPC3-204ENST00000461041 DRAM2Q6UX65 266 aa17.09■□□□□ 0.33
SNAPC3-204ENST00000461041 MEPCEQ7L2J0 689 aaKnown RBP17.09■□□□□ 0.33
SNAPC3-204ENST00000461041 SLC16A9Q7RTY1 509 aa17.09■□□□□ 0.33
SNAPC3-204ENST00000461041 BIVMQ86UB2 503 aa17.09■□□□□ 0.33
SNAPC3-204ENST00000461041 ZNF454Q8N9F8 522 aa17.09■□□□□ 0.33
SNAPC3-204ENST00000461041 THEM6Q8WUY1 208 aa17.09■□□□□ 0.33
SNAPC3-204ENST00000461041 SLC29A1Q99808 456 aa17.09■□□□□ 0.33
SNAPC3-204ENST00000461041 PIMREGQ9BSJ6 248 aa17.09■□□□□ 0.33
SNAPC3-204ENST00000461041 GSX1Q9H4S2 264 aaPredicted RBP17.09■□□□□ 0.33
SNAPC3-204ENST00000461041 MSL2Q9HCI7 577 aa17.09■□□□□ 0.33
SNAPC3-204ENST00000461041 ZNF469Q96JG9 3925 aaPredicted RBP17.08■□□□□ 0.33
SNAPC3-204ENST00000461041 CHD3Q12873 2000 aaKnown RBP17.08■□□□□ 0.33
SNAPC3-204ENST00000461041 A0A096LNT2 108 aa17.08■□□□□ 0.32
SNAPC3-204ENST00000461041 VWC2LB2RUY7 222 aa17.08■□□□□ 0.32
SNAPC3-204ENST00000461041 SPRY3O43610 288 aa17.08■□□□□ 0.32
SNAPC3-204ENST00000461041 IGHV1-46P01743 117 aa17.08■□□□□ 0.32
SNAPC3-204ENST00000461041 LYNP07948 512 aa17.08■□□□□ 0.32
SNAPC3-204ENST00000461041 MRPL3P09001 348 aaKnown RBP17.08■□□□□ 0.32
SNAPC3-204ENST00000461041 CCL8P80075 99 aa17.08■□□□□ 0.32
SNAPC3-204ENST00000461041 TSTQ16762 297 aaKnown RBP17.08■□□□□ 0.32
SNAPC3-204ENST00000461041 ZMAT1Q5H9K5 638 aa17.08■□□□□ 0.32
SNAPC3-204ENST00000461041 ZBTB49Q6ZSB9 765 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms